BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,461,874	T→C	P104P (CCT→CCC)	b1399 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,461,874	0	T	C	100.0%	316.8 / NA	101	P104P (CCT→CCC)	b1399	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (41/60); total (41/60)

Only 100 of 104 total aligned reads displayed.

ATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG  >  NC_000913/1461785‑1461963

aTCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCa                                                                                        <  1:2216894/93‑1 (MQ=255)

  cGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATg                                                                                      <  2:4391184/93‑1 (MQ=255)

    ggCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATggg                                                                                    >  1:2141870/1‑93 (MQ=255)

     gCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACTGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGa                                                                                   <  1:3302134/93‑1 (MQ=255)

      cGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGAt                                                                                  <  2:3110742/93‑1 (MQ=255)

       gACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATg                                                                                 <  2:1617235/93‑1 (MQ=255)

        aCGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATgg                                                                                <  1:1308675/93‑1 (MQ=255)

          gCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCCTGGGATGGTa                                                                              >  2:1147602/1‑93 (MQ=255)

           cAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTaa                                                                             >  1:4262743/1‑93 (MQ=255)

            aGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTaaa                                                                            >  1:289073/1‑93 (MQ=255)

            aGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTaaa                                                                            >  1:2276731/1‑93 (MQ=255)

             gTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAt                                                                           >  2:897807/1‑93 (MQ=255)

             gTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAAt                                                                           <  1:57583/93‑1 (MQ=255)

              tttCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATg                                                                          <  1:2916689/93‑1 (MQ=255)

              tttCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATg                                                                          <  1:3692869/93‑1 (MQ=255)

              tttCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATg                                                                          <  1:2880872/93‑1 (MQ=255)

               ttCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATgg                                                                         <  2:3620570/93‑1 (MQ=255)

                 cTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCt                                                                       >  2:968998/1‑93 (MQ=255)

                      gCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGt                                                                  <  1:2910301/93‑1 (MQ=255)

                      gCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGt                                                                  >  1:640882/1‑93 (MQ=255)

                       ccTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGtt                                                                 >  1:4565325/1‑93 (MQ=255)

                       ccTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGtt                                                                 <  2:2511156/93‑1 (MQ=255)

                        cTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTg                                                                >  2:909031/1‑93 (MQ=255)

                         tCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCCCATAGGATGGTAAATGGCTCCTGTTGc                                                               >  1:2668862/1‑93 (MQ=255)

                            gTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGctct                                                            >  1:3633083/1‑93 (MQ=255)

                             tcaTAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCtctc                                                           <  1:887007/91‑1 (MQ=255)

                              gATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCg                                                          <  2:376627/93‑1 (MQ=255)

                              gATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCg                                                          <  2:1774472/93‑1 (MQ=255)

                              gATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCg                                                          <  1:75456/93‑1 (MQ=255)

                               aTAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCgg                                                         >  1:3815357/1‑93 (MQ=255)

                                  aaGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAg                                                      <  2:341284/93‑1 (MQ=255)

                                  aaGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAg                                                      >  2:3139554/1‑93 (MQ=255)

                                   aGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAgg                                                     <  1:634983/93‑1 (MQ=255)

                                   aGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAgg                                                     <  1:4124683/93‑1 (MQ=255)

                                    ggCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGt                                                    >  2:1245235/1‑93 (MQ=255)

                                      cTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGttt                                                  >  2:2666675/1‑93 (MQ=255)

                                       ttGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTa                                                 <  1:1130577/93‑1 (MQ=255)

                                       ttGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTa                                                 <  2:4045647/93‑1 (MQ=255)

                                         gcgcCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGa                                               <  1:2535428/93‑1 (MQ=255)

                                          cgcCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGATAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGAt                                              <  2:2279381/93‑1 (MQ=255)

                                           gcCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATa                                             <  1:4310756/93‑1 (MQ=255)

                                            ccTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaa                                            >  2:4494786/1‑93 (MQ=255)

                                             cTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaaa                                           <  1:154623/93‑1 (MQ=255)

                                             cTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATaaa                                           <  1:725610/93‑1 (MQ=255)

                                               gACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATc                                         >  1:2548738/1‑93 (MQ=255)

                                               gACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATc                                         <  2:391832/93‑1 (MQ=255)

                                                 cgcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCaa                                       <  2:1667689/93‑1 (MQ=255)

                                                  gcgACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAAc                                      <  2:4311667/93‑1 (MQ=255)

                                                    gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    <  2:2861138/93‑1 (MQ=255)

                                                    gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    >  1:3811548/1‑93 (MQ=255)

                                                    gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    <  2:4567901/93‑1 (MQ=255)

                                                    gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    <  2:2949562/93‑1 (MQ=255)

                                                    gACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgc                                    >  2:1624362/1‑93 (MQ=255)

                                                       gggCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctgg                                 >  1:893001/1‑93 (MQ=255)

                                                         gCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctggct                               >  2:2605919/1‑93 (MQ=255)

                                                         gCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctggct                               <  1:2152300/93‑1 (MQ=255)

                                                         gCAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctggct                               <  2:3191421/93‑1 (MQ=255)

                                                          cAGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACgctggctg                              >  2:1077515/1‑93 (MQ=255)

                                                           aGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGa                             >  1:2320460/1‑93 (MQ=255)

                                                           aGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGa                             <  2:2218227/93‑1 (MQ=255)

                                                           aGAAAGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGa                             >  1:711907/1‑93 (MQ=255)

                                                             aaaGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATg                           >  2:4025684/1‑93 (MQ=255)

                                                             aaaGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATg                           >  1:1914577/1‑93 (MQ=255)

                                                              aaGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGt                          <  2:515435/93‑1 (MQ=255)

                                                               aGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTc                         >  1:1067875/1‑93 (MQ=255)

                                                               aGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTc                         >  2:1383888/1‑93 (MQ=255)

                                                               aGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTc                         <  2:3609838/93‑1 (MQ=255)

                                                               aGTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTc                         >  1:3915221/1‑93 (MQ=255)

                                                                gTAAAATTTATCGCGCAGAGCCACCCGCATGGGAAGGGAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATACATCCACGCTGGCTGATGGCa                        >  2:3676232/1‑93 (MQ=255)

                                                                gTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCa                        >  2:3676231/1‑93 (MQ=255)

                                                                gTAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCa                        >  1:2058266/1‑93 (MQ=255)

                                                                 tAAAATTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCaa                       >  1:4116522/1‑93 (MQ=255)

                                                                   aaaTTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCaaaa                     <  2:57903/93‑1 (MQ=255)

                                                                     aTTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAg                   <  2:2857480/93‑1 (MQ=255)

                                                                     aTTTATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAg                   >  2:2296927/1‑93 (MQ=255)

                                                                      tttATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGc                  <  1:1678201/93‑1 (MQ=255)

                                                                      tttATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGc                  >  1:4189216/1‑93 (MQ=255)

                                                                      tttATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGc                  >  2:1438652/1‑93 (MQ=255)

                                                                      attATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGc                  <  2:2996618/92‑1 (MQ=255)

                                                                       ttATGGCGCAGAACAACGCGCATGGGATGGTAAATGGCTCCTGTTGCTGTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCa                 <  2:3716405/93‑1 (MQ=255)

                                                                       ttATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCa                 <  1:3789620/93‑1 (MQ=255)

                                                                        tATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAg                <  1:267477/93‑1 (MQ=255)

                                                                        tATCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAg                <  1:2768175/93‑1 (MQ=255)

                                                                         aTCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGt               <  1:1831281/93‑1 (MQ=255)

                                                                          tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              <  2:1837950/93‑1 (MQ=255)

                                                                          tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              <  2:1527692/93‑1 (MQ=255)

                                                                          tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              >  2:4223105/1‑93 (MQ=255)

                                                                          tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              >  2:3376300/1‑93 (MQ=255)

                                                                          tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              <  1:2024710/93‑1 (MQ=255)

                                                                          tCGCGCAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGtt              <  1:2028570/93‑1 (MQ=255)

                                                                           cgcgCAGAGCAACCCGCATGGGATGGTAAATCGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTg             <  1:216331/93‑1 (MQ=255)

                                                                            gcgcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGa            >  2:3817088/1‑93 (MQ=255)

                                                                            gcgcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGa            <  2:1964228/93‑1 (MQ=255)

                                                                            gcgcAGAGCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGa            <  2:242482/93‑1 (MQ=255)

                                                                            gcgcAGAGAAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGa            <  2:4399745/93‑1 (MQ=255)

                                                                              gcAGAGCACCCCGCATGGGATGGTAAATGTCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATc          <  2:1763932/93‑1 (MQ=255)

                                                                                agagCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTg        <  1:3962249/93‑1 (MQ=255)

                                                                                  agCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGc      <  2:173250/93‑1 (MQ=255)

                                                                                  agCAACCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGc      <  1:3978672/93‑1 (MQ=255)

                                                                                      aCCCGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAgg  <  2:1837275/93‑1 (MQ=255)

ATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGG  >  NC_000913/1461785‑1461963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`