BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,464,084	T→C	intergenic (+999/+1861)	b1400 → / ← yi222	putative transferase/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,464,084	0	T	C	100.0%	375.8 / NA	120	intergenic (+999/+1861)	b1400/yi222	putative transferase/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (54/66); total (54/66)

Only 100 of 121 total aligned reads displayed.

TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCA  >  NC_000913/1463994‑1464173

tAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGc                                                                                         <  2:3567280/93‑1 (MQ=255)

 aaCACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGcc                                                                                        >  2:1576772/1‑93 (MQ=255)

  acacTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCca                                                                                       <  2:443356/93‑1 (MQ=255)

  acacTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCca                                                                                       >  1:1912552/1‑93 (MQ=255)

  acacTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCca                                                                                       >  1:485049/1‑93 (MQ=255)

  acacTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCca                                                                                       >  1:485050/1‑93 (MQ=255)

   cacTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCcac                                                                                      <  1:4672068/93‑1 (MQ=255)

    acTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCcaca                                                                                     <  1:3706360/93‑1 (MQ=255)

    acTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCcaca                                                                                     >  2:2575727/1‑93 (MQ=255)

     cTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAg                                                                                    <  2:2683536/93‑1 (MQ=255)

     cTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAg                                                                                    <  1:407189/93‑1 (MQ=255)

      tGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGt                                                                                   >  2:3303548/1‑93 (MQ=255)

        ttGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTaa                                                                                 <  2:2052725/93‑1 (MQ=255)

        ttGCCCTTGAAGGGGTGAGCGCAGACGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTaa                                                                                 <  1:4182858/93‑1 (MQ=255)

         tGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTaaa                                                                                <  2:42615/93‑1 (MQ=255)

         tGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTaaa                                                                                <  1:1047709/93‑1 (MQ=255)

          gCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaac                                                                               <  1:1881186/93‑1 (MQ=255)

            ccTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaacaa                                                                             >  1:4227108/1‑93 (MQ=255)

             cTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAaacaac                                                                            >  1:4178837/1‑93 (MQ=255)

              ttGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAacaaca                                                                           >  2:2080607/1‑93 (MQ=255)

               tGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAAcaacaa                                                                          <  1:2135286/93‑1 (MQ=255)

                gAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAAt                                                                         <  1:267041/93‑1 (MQ=255)

                 aaGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATg                                                                        >  1:392161/1‑93 (MQ=255)

                 aaGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATg                                                                        >  2:1574307/1‑93 (MQ=255)

                 aaGGCGTGAGCGCAGATGGGGCAACGAAGTGGCAATATAATCACAACGGTAAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATg                                                                        <  2:1750899/93‑1 (MQ=255)

                  aGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATgg                                                                       <  1:2132066/93‑1 (MQ=255)

                   ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATgga                                                                      >  2:1719325/1‑92 (MQ=255)

                   ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGc                                                                      >  1:3565638/1‑93 (MQ=255)

                   ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGc                                                                      >  2:3253787/1‑93 (MQ=255)

                   ggggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGc                                                                      <  1:1084816/93‑1 (MQ=255)

                    gggTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCa                                                                     >  2:1946655/1‑93 (MQ=255)

                       tGAGCGCAGATAGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCaaaa                                                                  <  2:3776611/93‑1 (MQ=255)

                        gAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGTTAACGCCACAGTAAACAACAATGGCAAAac                                                                 <  1:2165220/93‑1 (MQ=255)

                        gAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAac                                                                 <  2:2673375/93‑1 (MQ=255)

                         aGCGAAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAacc                                                                <  1:1947804/93‑1 (MQ=255)

                           cgcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccac                                                              <  1:1089533/93‑1 (MQ=255)

                            gcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccacc                                                             <  1:1485498/93‑1 (MQ=255)

                            gcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccacc                                                             >  2:930207/1‑93 (MQ=255)

                            gcAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAaccacc                                                             <  1:3219816/93‑1 (MQ=255)

                             cAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCg                                                            <  1:861971/93‑1 (MQ=255)

                             cAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCg                                                            <  1:623205/93‑1 (MQ=255)

                              aGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGt                                                           <  1:1612487/93‑1 (MQ=255)

                              aGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGt                                                           >  2:426639/1‑93 (MQ=255)

                               gATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGtt                                                          >  1:1191340/1‑93 (MQ=255)

                               gATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGtt                                                          >  1:3840231/1‑93 (MQ=255)

                               gATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCAACAGTAAACAACAATGGCAAAACCACCGtt                                                          <  1:3451478/93‑1 (MQ=255)

                                 tGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTAAGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGa                                                        >  2:2590892/1‑93 (MQ=255)

                                       aaCGAAGTGGCAATATAATCACAGCGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACTGTaa                                                  >  1:3213708/1‑93 (MQ=255)

                                       aaCGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTaa                                                  <  1:1024124/93‑1 (MQ=255)

                                       aaCGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTaa                                                  >  1:1264973/1‑93 (MQ=255)

                                        aCGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTaaa                                                 >  2:303514/1‑93 (MQ=255)

                                        aCGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTaaa                                                 <  2:632376/93‑1 (MQ=255)

                                          gAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGa                                               <  2:3413341/93‑1 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              <  2:3145457/93‑1 (MQ=255)

                                           aaGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGAt                                              >  1:2625517/1‑93 (MQ=255)

                                             gTGGCAATGTAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTc                                            <  2:1352376/93‑1 (MQ=255)

                                             gTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTc                                            >  2:1585026/1‑93 (MQ=255)

                                              tGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTcc                                           <  1:1513138/93‑1 (MQ=255)

                                               gtnaaTATAATCACAACGGTGANCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCa                                          <  1:3346454/90‑1 (MQ=255)

                                                gCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCAc                                         <  2:623894/93‑1 (MQ=255)

                                                  aaTATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCg                                       >  1:533514/1‑93 (MQ=255)

                                                  aaTATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCg                                       >  1:1146270/1‑93 (MQ=255)

                                                  aaTATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCg                                       >  1:3718445/1‑93 (MQ=255)

                                                  aaTATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCg                                       >  2:2854375/1‑93 (MQ=255)

                                                  aaTATAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCAACCg                                       >  2:4197800/1‑93 (MQ=255)

                                                   atatAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCgg                                      >  1:4429899/1‑93 (MQ=255)

                                                   atatAATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCgg                                      >  2:3245739/1‑93 (MQ=255)

                                                    tataATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCgga                                     >  1:942973/1‑92 (MQ=255)

                                                      taATCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTAc                                   >  1:2608749/1‑93 (MQ=255)

                                                       aaTCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACg                                  <  1:367064/93‑1 (MQ=255)

                                                       aaTCACAACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACg                                  >  2:2961401/1‑93 (MQ=255)

                                                          cacaACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGaa                               >  1:2256727/1‑93 (MQ=255)

                                                           acaACGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAATGATTCCACCGGTACGGaaa                              <  1:2425565/93‑1 (MQ=255)

                                                               cGGTGATCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAACCCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCaa                          <  2:4193998/93‑1 (MQ=255)

                                                               cGGTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCaa                          <  1:3338927/93‑1 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         <  1:2262876/93‑1 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         <  1:4435113/93‑1 (MQ=255)

                                                                ggTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAAc                         >  2:3917951/1‑93 (MQ=255)

                                                                 gTGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACg                        >  2:3852899/1‑93 (MQ=255)

                                                                  tGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACgg                       <  2:755865/93‑1 (MQ=255)

                                                                  tGAGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACgg                       >  1:2622405/1‑93 (MQ=255)

                                                                    aGCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGta                     >  2:3535966/1‑93 (MQ=255)

                                                                     gCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaa                    >  1:370704/1‑93 (MQ=255)

                                                                     gCTTGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGcaa                    >  2:2802904/1‑93 (MQ=255)

                                                                       ttGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaata                  <  2:1415979/93‑1 (MQ=255)

                                                                        tGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaataa                 <  1:2967352/93‑1 (MQ=255)

                                                                        tGTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGtaataa                 <  1:3834843/93‑1 (MQ=255)

                                                                         gTTATTACGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAAc                <  1:238793/93‑1 (MQ=255)

                                                                             ttaCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGa            <  1:2754038/93‑1 (MQ=255)

                                                                               aCGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGaaa          <  1:2429865/93‑1 (MQ=255)

                                                                                cGGGTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAg         <  2:3642874/93‑1 (MQ=255)

                                                                                 gggTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGt        <  1:2403682/93‑1 (MQ=255)

                                                                                  ggTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTg       >  2:1934147/1‑93 (MQ=255)

                                                                                   gTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGa      >  1:2635503/1‑93 (MQ=255)

                                                                                   gTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGa      <  1:3039365/93‑1 (MQ=255)

                                                                                   gTGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGa      <  2:2333277/93‑1 (MQ=255)

                                                                                    tGATAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGAt     <  1:2746762/93‑1 (MQ=255)

                                                                                      aTAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTc   >  1:2971946/1‑93 (MQ=255)

                                                                                      aTAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTc   <  1:1859392/93‑1 (MQ=255)

                                                                                       tAACGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCa  <  1:109198/93‑1 (MQ=255)

TAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCA  >  NC_000913/1463994‑1464173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`