BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,478,094	A→G	G311G (GGA→GGG)	b1410 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,478,094	0	A	G	100.0%	296.3 / NA	99	G311G (GGA→GGG)	b1410	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (56/43); total (56/43)

Only 100 of 106 total aligned reads displayed.

TTTATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGACCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCATC  >  NC_000913/1478004‑1478182

tttATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGcc                                                                                        >  2:2952494/1‑93 (MQ=255)

 ttATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGccc                                                                                       >  1:3468791/1‑93 (MQ=255)

  tataTGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCg                                                                                      >  2:1800629/1‑93 (MQ=255)

  tataTGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCg                                                                                      >  1:4504289/1‑93 (MQ=255)

   atatGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGt                                                                                     <  1:3181170/93‑1 (MQ=255)

    tatGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTg                                                                                    >  2:3371214/1‑93 (MQ=255)

    tatGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTg                                                                                    <  2:2398524/93‑1 (MQ=255)

      tGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGcc                                                                                  >  2:2921169/1‑93 (MQ=255)

      tGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGcc                                                                                  <  1:1576262/93‑1 (MQ=255)

       gCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCa                                                                                 >  1:231013/1‑93 (MQ=255)

        cTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCAt                                                                                >  1:331510/1‑93 (MQ=255)

         tAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCAtt                                                                               <  2:2757301/93‑1 (MQ=255)

           aCAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTAt                                                                             >  2:4377510/1‑93 (MQ=255)

           aCAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTAt                                                                             >  2:1604918/1‑93 (MQ=255)

            cAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATc                                                                            <  2:3164357/93‑1 (MQ=255)

            cAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATc                                                                            <  2:2603341/93‑1 (MQ=255)

              aaTCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGc                                                                          >  2:3801114/1‑93 (MQ=255)

               aTCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGcc                                                                         >  1:897001/1‑93 (MQ=255)

                  gCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGt                                                                      >  1:1321314/1‑93 (MQ=255)

                   cAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGtt                                                                     <  2:2374613/93‑1 (MQ=255)

                    aaaaaTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTg                                                                    >  1:864725/1‑93 (MQ=255)

                    aaaaaTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTg                                                                    >  1:1828428/1‑93 (MQ=255)

                      aaaTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGAt                                                                  >  1:4411792/1‑93 (MQ=255)

                        aTTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGAttt                                                                <  1:4335610/93‑1 (MQ=255)

                         tttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGGCCGTGCCAGTATCCGCGGTTGATTTa                                                               >  2:551716/1‑93 (MQ=255)

                         tttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTa                                                               >  1:1186518/1‑93 (MQ=255)

                         tttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTa                                                               <  2:3726439/93‑1 (MQ=255)

                         tttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTa                                                               >  2:1689634/1‑93 (MQ=255)

                         tttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTa                                                               <  2:2006038/93‑1 (MQ=255)

                         tttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTa                                                               <  1:1221465/93‑1 (MQ=255)

                         tttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCCCCGGTTGATTTa                                                               >  1:4177884/1‑93 (MQ=255)

                          ttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGGTACTTTCTGGGGGGCCCGTGCCATTATCGCCGGTTGATTTAg                                                              >  1:3134090/1‑93 (MQ=255)

                          ttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAg                                                              <  1:2647884/93‑1 (MQ=255)

                          ttGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAg                                                              <  1:3897192/93‑1 (MQ=255)

                           tGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGc                                                             <  2:1198879/93‑1 (MQ=255)

                            gATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGGCCGGGCCATTATCGCCGGTTGATTTcgcg                                                            >  1:4118831/1‑93 (MQ=255)

                              ttATCAGCATGAAGACTGCACAGGTCCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTa                                                          <  1:3364088/93‑1 (MQ=255)

                              ttATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTa                                                          >  1:2104695/1‑93 (MQ=255)

                               tATCAGCATGAAGACTGCACAGGCCCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTAt                                                         <  2:103497/93‑1 (MQ=255)

                                aTCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATc                                                        >  1:497828/1‑93 (MQ=255)

                                 tCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCg                                                       >  1:2548619/1‑93 (MQ=255)

                                  cAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGc                                                      <  1:3557431/93‑1 (MQ=255)

                                  cAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGc                                                      >  1:4517983/1‑93 (MQ=255)

                                   aGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCt                                                     >  1:3904251/1‑93 (MQ=255)

                                   aGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCt                                                     >  1:3904252/1‑93 (MQ=255)

                                   aGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCt                                                     >  2:3608411/1‑93 (MQ=255)

                                   aGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCt                                                     >  1:3218115/1‑93 (MQ=255)

                                    gCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCtt                                                    >  1:3252845/1‑93 (MQ=255)

                                       tGAAGAGTGCAGAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTAt                                                 <  1:728426/93‑1 (MQ=255)

                                       tGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTAt                                                 >  2:2324271/1‑93 (MQ=255)

                                        gAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGGCATTATCGCCGGTTGATTTAGTGTATCGCTTTATg                                                >  2:2278857/1‑93 (MQ=255)

                                        gAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATg                                                >  1:3167540/1‑93 (MQ=255)

                                         aaGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGc                                               >  1:4122993/1‑93 (MQ=255)

                                         aaGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGc                                               <  1:1504732/93‑1 (MQ=255)

                                          aGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCg                                              >  1:2163266/1‑93 (MQ=255)

                                            aCTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGaa                                            >  2:3137495/1‑93 (MQ=255)

                                            aCTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGaa                                            >  1:3655865/1‑93 (MQ=255)

                                            aCTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGaa                                            <  1:1174449/93‑1 (MQ=255)

                                            aCTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGaa                                            <  1:2745403/93‑1 (MQ=255)

                                              tGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGaaac                                          <  2:4504289/93‑2 (MQ=255)

                                              tGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAg                                          >  2:2795609/1‑93 (MQ=255)

                                              cgCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAg                                          <  1:3364980/92‑1 (MQ=255)

                                               gCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAgg                                         <  2:4538888/93‑1 (MQ=255)

                                                cacaGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGc                                        >  2:3319364/1‑93 (MQ=255)

                                                 acaGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCCTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCg                                       >  1:3040847/1‑93 (MQ=255)

                                                  caGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGa                                      <  1:3282318/93‑1 (MQ=255)

                                                   aGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGAt                                     <  1:2856436/93‑1 (MQ=255)

                                                   aGGACCATCAGCGCATCGATGGCGTCTACTTTCTGGTGGGCCCGTGCCATCATCGCCGGTTGATTTAGCGTATCCCTTTATGCGAAAGGCGAt                                     <  2:117773/93‑1 (MQ=255)

                                                    ggACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATg                                    <  2:26819/93‑1 (MQ=255)

                                                    ggACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATg                                    >  2:1884574/1‑93 (MQ=255)

                                                    ggACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATg                                    >  1:3068751/1‑93 (MQ=255)

                                                    ggACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATg                                    >  2:1444122/1‑93 (MQ=255)

                                                     gACCATCAGCAGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGa                                   <  2:616763/93‑1 (MQ=255)

                                                      aCCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGaa                                  >  2:217668/1‑93 (MQ=255)

                                                      aCCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGaa                                  >  2:2394594/1‑93 (MQ=255)

                                                        cATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAAt                                >  1:3929931/1‑93 (MQ=255)

                                                        cATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAAt                                <  2:1548043/93‑1 (MQ=255)

                                                        cATCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAAt                                <  2:3614450/93‑1 (MQ=255)

                                                          tCAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTg                              >  1:3999298/1‑93 (MQ=255)

                                                           cAGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGt                             <  1:1847225/93‑1 (MQ=255)

                                                            aGCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGtt                            >  1:2586399/1‑93 (MQ=255)

                                                             gCGGATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTc                           <  2:1691127/93‑1 (MQ=255)

                                                               ggATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCgg                         <  2:639984/93‑1 (MQ=255)

                                                               ggATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCgg                         <  2:2647999/93‑1 (MQ=255)

                                                               ggATCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCgg                         <  1:4623147/93‑1 (MQ=255)

                                                                 aTCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGa                       >  2:1338490/1‑93 (MQ=255)

                                                                 aTCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGa                       >  1:3938530/1‑93 (MQ=255)

                                                                  tCGATGGCGGCTACTTTCTGGTGGGCCCGTGTCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGAc                      >  1:475919/1‑93 (MQ=255)

                                                                  tCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGGTTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGAc                      <  1:3765999/93‑1 (MQ=255)

                                                                  tCGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGAc                      <  2:4501123/93‑1 (MQ=255)

                                                                   cGATGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACg                     <  1:4232955/93‑1 (MQ=255)

                                                                     aTGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCa                   >  2:2108680/1‑93 (MQ=255)

                                                                     aTGGCGGCTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCa                   <  1:89315/93‑1 (MQ=255)

                                                                          ggcTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCtt              >  1:3012426/1‑93 (MQ=255)

                                                                            cTACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCg            >  1:2939541/1‑93 (MQ=255)

                                                                             tACTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTccg           >  1:2049404/1‑91 (MQ=255)

                                                                              aCTTTCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCggg          <  1:1352963/93‑1 (MQ=255)

                                                                                tttCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGcc        <  1:867946/93‑1 (MQ=255)

                                                                                  tCTGGTGGGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTg      >  2:941127/1‑93 (MQ=255)

                                                                                      gtggGCCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCAtc  >  2:1167655/1‑93 (MQ=255)

TTTATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGACCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCATC  >  NC_000913/1478004‑1478182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`