Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,481,285 A→G A67A (GCA→GCG hrpA → helicase, ATP‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,481,2850AG100.0% 300.8 / NA 96A67A (GCA→GCGhrpAhelicase, ATP‑dependent
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (39/57);  total (39/57)

TAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAT  >  NC_000913/1481195‑1481374
                                                                                          |                                                                                         
tAAAAATCCTGATGCACAACAGGCCATTTTCCAGGGGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGcgcg                                                                                         <  2:2841833/93‑1 (MQ=255)
 aaaaaTCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGa                                                                                        >  2:3114894/1‑93 (MQ=255)
  aaaaTCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGAc                                                                                       >  2:3054632/1‑93 (MQ=255)
   aaaTCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGAcc                                                                                      >  1:2836861/1‑93 (MQ=255)
    aaTCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCg                                                                                     <  2:3126638/93‑1 (MQ=255)
        cTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGCCCGGcaa                                                                                 >  1:2061092/1‑93 (MQ=255)
        cTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGaaa                                                                                 <  1:3893356/93‑1 (MQ=255)
         tGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAAt                                                                                <  1:2391448/93‑1 (MQ=255)
          gATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAAtt                                                                               <  1:181804/93‑1 (MQ=255)
          gATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAAtt                                                                               >  1:4242492/1‑93 (MQ=255)
           aTGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTa                                                                              <  2:1863784/93‑1 (MQ=255)
            tGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTAc                                                                             <  2:2088001/93‑1 (MQ=255)
            tGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTAc                                                                             <  2:1282975/93‑1 (MQ=255)
            tGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTAc                                                                             <  1:4271619/93‑1 (MQ=255)
              cacaACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACtt                                                                           >  2:2050130/1‑93 (MQ=255)
               acaacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACttt                                                                          >  1:3617912/1‑92 (MQ=255)
               acaacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTa                                                                          >  2:2047577/1‑93 (MQ=255)
               acaacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTa                                                                          <  1:799324/93‑1 (MQ=255)
               acaacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTa                                                                          >  1:1129280/1‑93 (MQ=255)
               acaacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTa                                                                          >  1:1124029/1‑93 (MQ=255)
                 aacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATc                                                                        >  1:653099/1‑93 (MQ=255)
                 aacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATc                                                                        <  1:1508161/93‑1 (MQ=255)
                 aacaGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATc                                                                        >  1:3847235/1‑93 (MQ=255)
                   caGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCt                                                                      <  2:3814971/93‑1 (MQ=255)
                    aGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTg                                                                     >  1:4313880/1‑93 (MQ=255)
                     ggCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGa                                                                    >  2:2114238/1‑93 (MQ=255)
                     ggCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGa                                                                    <  1:4163818/93‑1 (MQ=255)
                      gCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGAc                                                                   >  1:2927904/1‑93 (MQ=255)
                       ccATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACa                                                                  >  2:2661486/1‑93 (MQ=255)
                        cATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACaa                                                                 <  2:944759/93‑1 (MQ=255)
                        cATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACaa                                                                 >  1:247236/1‑93 (MQ=255)
                        cATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACaa                                                                 <  2:3595738/93‑1 (MQ=255)
                         aTTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAAt                                                                >  2:3651860/1‑93 (MQ=255)
                          ttttCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAAtt                                                               <  2:368012/93‑1 (MQ=255)
                          ttttCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAAtt                                                               <  2:1665047/93‑1 (MQ=255)
                          ttttCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATCACTTATCTTGACAAtt                                                               >  2:2245755/1‑93 (MQ=255)
                            ttCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTa                                                             <  1:603009/93‑1 (MQ=255)
                             tcaaGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGCCCCGAAATTACTTATCCTGACAATTTAc                                                            <  1:3232169/90‑1 (MQ=255)
                             tCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTAc                                                            <  2:3037872/93‑1 (MQ=255)
                             tCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTAc                                                            <  2:2455943/93‑1 (MQ=255)
                              ccAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTAcc                                                           <  2:636131/93‑1 (MQ=255)
                              ccAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTAcc                                                           <  1:1773062/93‑1 (MQ=255)
                                 ggAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGt                                                        <  1:2556338/93‑1 (MQ=255)
                                  gagaTGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGtt                                                       <  2:3488928/93‑1 (MQ=255)
                                   agaTGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTa                                                      >  1:4296311/1‑93 (MQ=255)
                                   agaTGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTa                                                      <  1:3800582/93‑1 (MQ=255)
                                      tGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGACATTACTTATCCTGACAATTTACCGGTTAGTc                                                   <  2:3755117/93‑1 (MQ=255)
                                      tGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTc                                                   <  2:716648/93‑1 (MQ=255)
                                        gCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAg                                                 >  1:646000/1‑93 (MQ=255)
                                         cGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGa                                                <  2:4046767/93‑1 (MQ=255)
                                           aaaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaa                                              >  1:757097/1‑93 (MQ=255)
                                           aaaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaa                                              >  2:1307061/1‑93 (MQ=255)
                                            aaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaaa                                             <  1:2919320/93‑1 (MQ=255)
                                            aaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaaa                                             >  1:3999551/1‑93 (MQ=255)
                                            aaGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaaa                                             >  2:1499198/1‑93 (MQ=255)
                                              gagaTTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGaaaaaa                                           <  1:3656059/93‑1 (MQ=255)
                                               agaTTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAAc                                          <  1:4070978/93‑1 (MQ=255)
                                                gaTTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACa                                         >  1:2503862/1‑93 (MQ=255)
                                                 aTTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAg                                        <  1:3073169/93‑1 (MQ=255)
                                                 aTTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAg                                        <  2:696772/93‑1 (MQ=255)
                                                  ttGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAgg                                       <  1:1609587/93‑1 (MQ=255)
                                                    gACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGAc                                     <  2:4528324/93‑1 (MQ=255)
                                                    gACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGAc                                     <  1:731686/93‑1 (MQ=255)
                                                     aCCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACa                                    <  2:132404/93‑1 (MQ=255)
                                                     aCCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACa                                    >  2:4224618/1‑93 (MQ=255)
                                                     aCCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACa                                    <  1:535493/93‑1 (MQ=255)
                                                      ccAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACAt                                   >  1:4168088/1‑93 (MQ=255)
                                                       cAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACAtt                                  <  1:4381843/93‑1 (MQ=255)
                                                        aGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATtc                                 <  1:2903875/93‑1 (MQ=255)
                                                          gcggcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATtctc                               >  2:252696/1‑93 (MQ=255)
                                                           cggcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCg                              <  2:2633224/93‑1 (MQ=255)
                                                             gcAGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGaa                            <  1:47184/93‑1 (MQ=255)
                                                               aGGGAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGc                          <  2:3109859/93‑1 (MQ=255)
                                                                gggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCg                         >  2:2094877/1‑93 (MQ=255)
                                                                gggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCg                         >  2:3115458/1‑93 (MQ=255)
                                                                gggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTAGAAGCg                         >  2:2781922/1‑93 (MQ=255)
                                                                 ggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGa                        <  2:2016403/93‑1 (MQ=255)
                                                                 ggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGa                        >  1:3562123/1‑93 (MQ=255)
                                                                 ggAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGa                        <  1:3926514/93‑1 (MQ=255)
                                                                  gAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGAt                       <  2:2686700/93‑1 (MQ=255)
                                                                  gAAAGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGAt                       <  1:1802940/93‑1 (MQ=255)
                                                                    aaGTCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTc                     <  1:2751038/93‑1 (MQ=255)
                                                                       tCCTGCTGCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTg                  >  2:4351626/1‑93 (MQ=255)
                                                                         ctgctgCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGAt                <  1:1777656/93‑1 (MQ=255)
                                                                         ctgctgCGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGAt                <  2:4108061/93‑1 (MQ=255)
                                                                          tgctgcGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATc               <  1:1590278/93‑1 (MQ=255)
                                                                          tgctgcGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATc               >  2:3992100/1‑93 (MQ=255)
                                                                              gcGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCa           >  1:2030454/1‑93 (MQ=255)
                                                                              gcGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCa           >  1:1718702/1‑93 (MQ=255)
                                                                               cGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAg          <  2:895454/93‑1 (MQ=255)
                                                                               cGTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAg          <  2:243272/93‑1 (MQ=255)
                                                                                gTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAgg         <  2:2810460/93‑1 (MQ=255)
                                                                                gTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAgg         >  2:2345889/1‑93 (MQ=255)
                                                                                gTGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAgg         >  2:3234479/1‑93 (MQ=255)
                                                                                 tGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAggt        <  2:514901/93‑1 (MQ=255)
                                                                                 tGAAGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAggt        <  2:2235856/93‑1 (MQ=255)
                                                                                    aGCGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAggtggt     >  1:1260116/1‑93 (MQ=255)
                                                                                     gcggcgCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGgtggtg    >  1:4358718/1‑93 (MQ=255)
                                                                                      cGGCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGa   <  2:1254601/93‑1 (MQ=255)
                                                                                       ggCGCGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAt  <  2:2568294/93‑1 (MQ=255)
                                                                                          |                                                                                         
TAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAT  >  NC_000913/1481195‑1481374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: