BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,481,375	C→T	I97I (ATC→ATT)	hrpA →	helicase, ATP‑dependent

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,481,375	0	C	T	100.0%	448.5 / NA	123	I97I (ATC→ATT)	hrpA	helicase, ATP‑dependent
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (75/48); total (75/48)

Only 100 of 131 total aligned reads displayed.

CGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGC  >  NC_000913/1481286‑1481462

cGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAttgtc                                                                                      >  1:538556/1‑93 (MQ=255)

 gACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGAttgtcg                                                                                     >  2:73165/1‑93 (MQ=255)

   ccGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGcc                                                                                   >  2:1386087/1‑93 (MQ=255)

     ggAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCgg                                                                                 <  2:2185610/93‑1 (MQ=255)

     ggAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCgg                                                                                 <  1:4212761/93‑1 (MQ=255)

        aaTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGa                                                                              >  1:886758/1‑93 (MQ=255)

        aaTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGa                                                                              >  1:1570856/1‑93 (MQ=255)

        aaTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGa                                                                              >  1:1643001/1‑93 (MQ=255)

        aaTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGa                                                                              >  2:3636209/1‑93 (MQ=255)

         aTTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaa                                                                             >  2:3299749/1‑93 (MQ=255)

          ttACTTATCTTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCCGGTGGTGATTGTCGCCGGGGaca                                                                            >  1:1535860/1‑91 (MQ=255)

          ttACTTATCCTGATAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaaa                                                                            <  1:3956937/93‑1 (MQ=255)

          ttACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaaa                                                                            <  2:2954315/93‑1 (MQ=255)

          ttACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGaaa                                                                            >  1:306632/1‑93 (MQ=255)

           tACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAAc                                                                           <  2:2811399/93‑1 (MQ=255)

           tACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAAc                                                                           <  2:336267/93‑1 (MQ=255)

            aCTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACg                                                                          >  2:2857656/1‑93 (MQ=255)

             cTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACgg                                                                         <  1:2659301/93‑1 (MQ=255)

             cTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACgg                                                                         >  2:1343590/1‑93 (MQ=255)

              ttATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACggg                                                                        >  1:3513229/1‑93 (MQ=255)

               tATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGt                                                                       >  1:2732787/1‑93 (MQ=255)

                 tCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTc                                                                     >  2:1662448/1‑93 (MQ=255)

                 tCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTc                                                                     <  1:939930/93‑1 (MQ=255)

                 tCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTc                                                                     >  2:4554705/1‑93 (MQ=255)

                 tCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTc                                                                     <  2:3464655/93‑1 (MQ=255)

                 tCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGCTGGTGATTGTCGCCGGGGAAACGGGTTc                                                                     >  1:4395950/1‑93 (MQ=255)

                   cTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTg                                                                   >  1:3757493/1‑93 (MQ=255)

                   cTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTg                                                                   >  1:3569021/1‑93 (MQ=255)

                     gACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGt                                                                 >  2:1011401/1‑93 (MQ=255)

                     caCAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGt                                                                 <  2:1871931/92‑1 (MQ=255)

                      aCAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTa                                                                <  1:1230836/93‑1 (MQ=255)

                      aCAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTa                                                                >  2:1560509/1‑93 (MQ=255)

                      aCAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTa                                                                >  1:4143071/1‑93 (MQ=255)

                        aaTTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTaaa                                                              >  2:1738205/1‑93 (MQ=255)

                          tttACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAAc                                                            <  1:824094/93‑1 (MQ=255)

                            tACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGa                                                          >  1:3838103/1‑93 (MQ=255)

                              ccGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACt                                                        >  2:2258650/1‑93 (MQ=255)

                               cGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGAGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTc                                                       >  1:2305986/1‑93 (MQ=255)

                                ggTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCa                                                      >  1:2371845/1‑93 (MQ=255)

                                ggTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCa                                                      <  1:4011768/93‑1 (MQ=255)

                                 gTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAg                                                     >  2:3275022/1‑93 (MQ=255)

                                  ttAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGt                                                    >  1:3471009/1‑93 (MQ=255)

                                  ttAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGt                                                    <  2:227160/93‑1 (MQ=255)

                                  ttAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGt                                                    >  1:1416117/1‑93 (MQ=255)

                                  ttACTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGt                                                    <  2:1866103/93‑1 (MQ=255)

                                   tAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGtt                                                   <  1:2117076/93‑1 (MQ=255)

                                      tCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTAcc                                                >  2:4331524/1‑93 (MQ=255)

                                        aGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGa                                              >  1:3251115/1‑93 (MQ=255)

                                        aGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGa                                              >  2:398783/1‑93 (MQ=255)

                                        aGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGGTACCGa                                              >  2:3204129/1‑93 (MQ=255)

                                          aaaaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGaaa                                            >  1:2180307/1‑93 (MQ=255)

                                          aaaaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGaaa                                            >  2:3149235/1‑93 (MQ=255)

                                           aaaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGaaaa                                           <  2:1992454/93‑1 (MQ=255)

                                           aaaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGaaaa                                           <  2:1197995/93‑1 (MQ=255)

                                           aaaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGaaaa                                           <  2:3989418/93‑1 (MQ=255)

                                           aaaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGGTCTGGTAAAACGACTCAGTTACCGaaaa                                           >  2:2550128/1‑93 (MQ=255)

                                            aaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAt                                          >  1:359652/1‑93 (MQ=255)

                                            aaaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAt                                          >  1:2796139/1‑93 (MQ=255)

                                             aaaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATc                                         >  2:1847693/1‑93 (MQ=255)

                                              aaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAAtat                                        >  1:1716627/1‑91 (MQ=255)

                                              aaCAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCt                                        <  2:1536018/93‑1 (MQ=255)

                                                cAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGt                                      >  1:2412207/1‑93 (MQ=255)

                                                cAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGt                                      <  1:1720944/93‑1 (MQ=255)

                                                 aGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTa                                     >  2:3474205/1‑93 (MQ=255)

                                                  ggACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTAt                                    <  2:1124029/93‑1 (MQ=255)

                                                   gACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATg                                   <  1:1364333/93‑1 (MQ=255)

                                                   gACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATg                                   <  1:1726711/93‑1 (MQ=255)

                                                    aCATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATgg                                  <  2:3744831/93‑1 (MQ=255)

                                                     cATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGa                                 <  1:49543/93‑1 (MQ=255)

                                                     cATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGa                                 <  1:3873139/93‑1 (MQ=255)

                                                     cATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGa                                 <  1:2762115/93‑1 (MQ=255)

                                                      aTTCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAg                                <  1:3190394/93‑1 (MQ=255)

                                                       ttCTCGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGc                               >  1:967035/1‑93 (MQ=255)

                                                        tctcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCt                              >  1:1181500/1‑93 (MQ=255)

                                                        tctcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCt                              <  2:3349151/93‑1 (MQ=255)

                                                          tcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgg                            >  2:2017704/1‑93 (MQ=255)

                                                          tcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgg                            <  2:4296311/93‑1 (MQ=255)

                                                          tcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTgg                            >  2:3615370/1‑93 (MQ=255)

                                                          tcGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTAAGTTACCGAAAATCTGTATGGAGCTgg                            >  2:3510117/1‑93 (MQ=255)

                                                           cGAAGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTggg                           >  2:1994254/1‑93 (MQ=255)

                                                             aaGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgc                         <  1:3366287/93‑1 (MQ=255)

                                                              aGCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgcg                        >  1:1354489/1‑93 (MQ=255)

                                                               gCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgcgc                       >  1:4463225/1‑93 (MQ=255)

                                                               gCGATTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGgcgc                       >  2:4310252/1‑93 (MQ=255)

                                                                  aTTCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCggg                    >  1:966031/1‑93 (MQ=255)

                                                                   ttCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGa                   >  2:712961/1‑93 (MQ=255)

                                                                   ttCGTGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGa                   <  1:257950/93‑1 (MQ=255)

                                                                       tGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaa               >  2:1148901/1‑93 (MQ=255)

                                                                       tGATCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTaa               <  2:4540982/93‑1 (MQ=255)

                                                                         aTCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAg             <  1:302707/93‑1 (MQ=255)

                                                                          tCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTTCCGAAAATCTGTATAGCGCTGGGGCGCGGGATTAAAgg            >  1:4274717/1‑93 (MQ=255)

                                                                          tCACCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAgg            >  2:966565/1‑93 (MQ=255)

                                                                          tCACCAGGTGGTGATTGTCGCCAGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAgg            <  1:1285462/93‑1 (MQ=255)

                                                                            aCCAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGAc          >  1:593095/1‑93 (MQ=255)

                                                                             ccAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACt         <  2:3608981/93‑1 (MQ=255)

                                                                             ccAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACt         <  1:1238509/93‑1 (MQ=255)

                                                                              cAGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTg        >  2:3156827/1‑93 (MQ=255)

                                                                               aGGTGGTGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGa       >  1:3104683/1‑93 (MQ=255)

                                                                                ggtggtGATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGAt      >  2:4669658/1‑93 (MQ=255)

                                                                                    gtgATTGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGc  >  2:1752143/1‑93 (MQ=255)

CGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGC  >  NC_000913/1481286‑1481462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`