Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,488,168 A→G intergenic (+473/‑722) ald → / → cybB aldehyde dehydrogenase, NAD‑linked/cytochrome b(561)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,488,1680AG98.9% 287.3 / ‑4.8 94intergenic (+473/‑722)ald/cybBaldehyde dehydrogenase, NAD‑linked/cytochrome b(561)
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (44/49);  total (44/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01

CGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCACGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAG  >  NC_000913/1488078‑1488255
                                                                                          |                                                                                       
cGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACcgcg                                                                                       <  1:2694159/93‑1 (MQ=255)
 gggATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCgcgc                                                                                      >  1:1140677/1‑93 (MQ=255)
 gggATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCgcgc                                                                                      <  2:1603002/93‑1 (MQ=255)
 gggATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCgcgc                                                                                      >  2:1654752/1‑93 (MQ=255)
  ggATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACcgcgcg                                                                                     <  1:3509222/93‑1 (MQ=255)
   gATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCgg                                                                                    <  1:1349046/93‑1 (MQ=255)
    aTCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCggg                                                                                   <  1:410889/93‑1 (MQ=255)
    aTCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCggg                                                                                   <  1:890300/93‑1 (MQ=255)
     tCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGc                                                                                  >  2:3470499/1‑93 (MQ=255)
      cACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGcc                                                                                 <  1:1128302/93‑1 (MQ=255)
      cACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGcc                                                                                 <  2:1658180/93‑1 (MQ=255)
       aCCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCa                                                                                <  2:3368390/93‑1 (MQ=255)
       aCCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCa                                                                                <  1:45490/93‑1 (MQ=255)
       aCCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCa                                                                                <  2:621030/93‑1 (MQ=255)
        ccAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCAt                                                                               >  1:3662745/1‑93 (MQ=255)
           gACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGGATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATcca                                                                            >  2:1046437/1‑93 (MQ=255)
           gACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATcca                                                                            >  2:2300232/1‑93 (MQ=255)
            aCCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATccac                                                                           >  1:2120130/1‑93 (MQ=255)
            aCCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATccac                                                                           >  2:1605790/1‑93 (MQ=255)
             ccAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATccacc                                                                          >  2:1998292/1‑93 (MQ=255)
              cAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATccacca                                                                         <  2:666493/93‑1 (MQ=255)
                aTGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGt                                                                       >  1:303706/1‑93 (MQ=255)
                aTGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGt                                                                       >  2:1162124/1‑93 (MQ=255)
                 tGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTg                                                                      >  2:236601/1‑93 (MQ=255)
                  ggCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGa                                                                     <  2:1194202/93‑1 (MQ=255)
                   gCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGAc                                                                    <  2:1349211/93‑1 (MQ=255)
                   gCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGAc                                                                    >  2:4522336/1‑93 (MQ=255)
                     ttttGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTg                                                                  <  2:3601624/93‑1 (MQ=255)
                      tttGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGGCTgg                                                                 <  2:1295066/93‑1 (MQ=255)
                      tttGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTgg                                                                 <  1:361019/93‑1 (MQ=255)
                      tttGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTgg                                                                 <  1:1970931/93‑1 (MQ=255)
                      tttGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTgg                                                                 <  2:2344179/93‑1 (MQ=255)
                       ttGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTggg                                                                <  2:1086615/93‑1 (MQ=255)
                         gccgccCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTg                                                              <  2:3578951/93‑1 (MQ=255)
                             cccccGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAg                                                          <  2:4086051/93‑1 (MQ=255)
                             cccccGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAg                                                          >  2:1845304/1‑93 (MQ=255)
                              ccccGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGt                                                         >  2:1643379/1‑93 (MQ=255)
                              ccccGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGAGACTGGGTGCCAGt                                                         >  1:25458/1‑93 (MQ=255)
                               cccGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGta                                                        >  2:356571/1‑93 (MQ=255)
                               cccGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGta                                                        >  2:3173543/1‑93 (MQ=255)
                                ccGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGtat                                                       >  2:2252313/1‑93 (MQ=255)
                                 cGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGtata                                                      <  1:1924731/93‑1 (MQ=255)
                                 cGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGtata                                                      >  2:3458312/1‑93 (MQ=255)
                                 cGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGtata                                                      >  2:2815/1‑93 (MQ=255)
                                  gTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGtatcg                                                     >  2:3982216/1‑91 (MQ=255)
                                  gTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAg                                                     >  2:1036672/1‑93 (MQ=255)
                                   tAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAgg                                                    >  1:3604884/1‑93 (MQ=255)
                                   tAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAgg                                                    <  2:2728080/93‑1 (MQ=255)
                                     gtgtGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCa                                                  >  2:2696424/1‑93 (MQ=255)
                                     gtgtGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCa                                                  >  1:3263303/1‑93 (MQ=255)
                                         ggggAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGaa                                              <  1:2939594/93‑1 (MQ=255)
                                          gggAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAAt                                             <  1:3196959/93‑1 (MQ=255)
                                           ggAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATg                                            <  1:3296668/93‑1 (MQ=255)
                                           ggAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATg                                            <  2:3217193/93‑1 (MQ=255)
                                             aaTGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGgt                                          >  1:3662110/1‑93 (MQ=255)
                                               tGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGgtcg                                        >  1:1360391/1‑93 (MQ=255)
                                                gATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGgtcgt                                       >  1:1708970/1‑93 (MQ=255)
                                                  tatTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCa                                     <  2:2471690/93‑1 (MQ=255)
                                                  tatTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCa                                     >  1:4278582/1‑93 (MQ=255)
                                                     tttCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCg                                  <  1:1751761/93‑1 (MQ=255)
                                                      ttCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGt                                 <  1:1097206/93‑1 (MQ=255)
                                                      ttCTCCCGGTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGt                                 <  2:1682262/93‑1 (MQ=255)
                                                        cTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGc                               >  1:1973525/1‑93 (MQ=255)
                                                           cgggtGCGCGGGAGGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGa                            <  2:2213340/89‑1 (MQ=255)
                                                             gCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACt                          <  2:3020044/93‑1 (MQ=255)
                                                             gCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACt                          >  1:2990496/1‑93 (MQ=255)
                                                             gCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACt                          >  1:4407824/1‑93 (MQ=255)
                                                             gCTGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACt                          <  2:2575055/93‑1 (MQ=255)
                                                               tGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTc                        <  1:2582549/93‑1 (MQ=255)
                                                               tGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTc                        >  1:3195694/1‑93 (MQ=255)
                                                               tGCGCGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTc                        <  2:3908093/93‑1 (MQ=255)
                                                                gcgcGTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCt                       <  1:3938255/93‑1 (MQ=255)
                                                                  gcgTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTAt                     <  1:1962032/93‑1 (MQ=255)
                                                                   cgTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATc                    >  1:3433830/1‑93 (MQ=255)
                                                                   cgTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATc                    <  2:4383802/93‑1 (MQ=255)
                                                                   cgTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATc                    <  1:1944629/93‑1 (MQ=255)
                                                                    gTGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTAtgc                   >  2:1476146/1‑91 (MQ=255)
                                                                     tGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATccc                  <  1:2352122/93‑1 (MQ=255)
                                                                     tGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATccc                  <  1:2637331/93‑1 (MQ=255)
                                                                     tGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATccc                  <  1:2696849/93‑1 (MQ=255)
                                                                     tGAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATccc                  >  1:3416313/1‑93 (MQ=255)
                                                                      gAAGCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCg                 >  1:4623483/1‑93 (MQ=255)
                                                                         gCACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGaaa              <  1:4493950/93‑1 (MQ=255)
                                                                          cACGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAAc             <  2:2140067/93‑1 (MQ=255)
                                                                            cGTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTg           >  1:4437810/1‑93 (MQ=255)
                                                                             gTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGt          >  1:1317977/1‑93 (MQ=255)
                                                                             gTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGt          <  1:3299657/93‑1 (MQ=255)
                                                                             gTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGt          >  2:1850449/1‑93 (MQ=255)
                                                                             gTAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGt          >  1:254734/1‑93 (MQ=255)
                                                                              tAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTc         >  1:4166049/1‑93 (MQ=255)
                                                                              tAAATCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTc         <  2:544183/93‑1 (MQ=255)
                                                                               aaaTCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCa        <  2:4096800/93‑1 (MQ=255)
                                                                                aaTCTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCAt       >  2:4028264/1‑93 (MQ=255)
                                                                                   cTTTACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCa    <  1:3810771/93‑1 (MQ=255)
                                                                                    tttACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCaa   <  2:1396412/93‑1 (MQ=255)
                                                                                    tttACCACGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCaa   <  2:1781627/93‑1 (MQ=255)
                                                                                     ttACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAg  >  2:2469701/1‑93 (MQ=255)
                                                                                     ttACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAg  >  2:4123552/1‑93 (MQ=255)
                                                                                     ttACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAg  <  1:4648233/93‑1 (MQ=255)
                                                                                     ttACCGCGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAg  <  2:82340/93‑1 (MQ=255)
                                                                                          |                                                                                       
CGGGATCACCAGACCAATGGCTTTTGCCGCCCCCGTAGTGTGGGGAATGATATTTTCTGCCGCTGCGCGTGAAGCACGTAAATCTTTACCACGCGGGCCATCCACCAGTGACTGGGTGCCAGTATAGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAG  >  NC_000913/1488078‑1488255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: