BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,493,567	T→C	F86L (TTT→CTT)	b1423 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,493,567	0	T	C	100.0%	318.1 / NA	103	F86L (TTT→CTT)	b1423	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (43/60); total (43/60)

Only 100 of 112 total aligned reads displayed.

AATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGAT  >  NC_000913/1493477‑1493656

aaTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGctt                                                                                         <  2:3854821/93‑1 (MQ=255)

aaTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGctt                                                                                         >  2:2912689/1‑93 (MQ=255)

aaTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGctt                                                                                         <  2:1195620/93‑1 (MQ=255)

aaTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGctt                                                                                         >  2:117649/1‑93 (MQ=255)

aaTGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGctt                                                                                         >  2:117648/1‑93 (MQ=255)

   gCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGcc                                                                                      <  1:293944/93‑1 (MQ=255)

    cAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCa                                                                                     <  1:1777278/93‑1 (MQ=255)

     aGACGAGCTGGCGCGACTGAATGTTGAACGTCCTGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGTTACTCTTCGGCGGATGCTTGCGAt                                                                                    >  1:2687685/1‑93 (MQ=255)

     aGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAt                                                                                    >  2:1370434/1‑93 (MQ=255)

     aGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAt                                                                                    >  1:3958777/1‑93 (MQ=255)

      gACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGCCTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAtt                                                                                   >  2:1653730/1‑93 (MQ=255)

      gACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAtt                                                                                   >  2:2797791/1‑93 (MQ=255)

      gACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAtt                                                                                   >  2:3877660/1‑93 (MQ=255)

      gACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAtt                                                                                   >  2:2014745/1‑93 (MQ=255)

      gACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCAtt                                                                                   >  2:3939017/1‑93 (MQ=255)

        cGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTAt                                                                                 <  1:1013470/93‑1 (MQ=255)

        cGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTAt                                                                                 <  1:1589322/93‑1 (MQ=255)

         gAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGGCATTATg                                                                                >  2:2111380/1‑93 (MQ=255)

         gAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATg                                                                                <  1:2906552/93‑1 (MQ=255)

          aGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATgg                                                                               <  1:3444852/93‑1 (MQ=255)

          aGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATgg                                                                               <  1:2540236/93‑1 (MQ=255)

          aGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATgg                                                                               >  2:2633100/1‑93 (MQ=255)

           gCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATggg                                                                              <  1:141489/93‑1 (MQ=255)

              ggCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGAt                                                                           <  1:4659926/93‑1 (MQ=255)

               gcgcGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATg                                                                          >  2:1630326/1‑93 (MQ=255)

                  cgACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTGGCTACTCTTCGGCGGATGCTGGCCATTATGGGGATGTAc                                                                       <  2:4389398/93‑1 (MQ=255)

                   gACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTAcc                                                                      >  1:2123084/1‑93 (MQ=255)

                    gcTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTAccc                                                                     <  1:3905927/92‑1 (MQ=255)

                    aatGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTAGCCATTATGGGGATGTAccc                                                                     >  1:3126217/3‑93 (MQ=255)

                    aCTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTAccc                                                                     >  2:3214710/1‑93 (MQ=255)

                      tGAATGTTGAACCTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTAccccg                                                                   >  1:4177073/1‑91 (MQ=255)

                       gAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGt                                                                  <  2:4589595/93‑1 (MQ=255)

                       gAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGt                                                                  >  2:2910886/1‑93 (MQ=255)

                       gAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGt                                                                  <  1:1208633/93‑1 (MQ=255)

                          tGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAg                                                               >  2:4314170/1‑93 (MQ=255)

                           gTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGc                                                              >  1:3842896/1‑93 (MQ=255)

                              gAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTAt                                                           <  2:3499908/93‑1 (MQ=255)

                                aCGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTa                                                         <  1:980214/93‑1 (MQ=255)

                                aCGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTa                                                         >  1:2262350/1‑93 (MQ=255)

                                aCGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTa                                                         <  1:2147377/93‑1 (MQ=255)

                                  gTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACg                                                       <  1:757112/93‑1 (MQ=255)

                                    cATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAt                                                     >  1:1712652/1‑93 (MQ=255)

                                       ggggCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctc                                                  >  2:3784352/1‑93 (MQ=255)

                                       ggggCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctc                                                  <  1:3063609/93‑1 (MQ=255)

                                         ggCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctctc                                                <  2:3868645/93‑1 (MQ=255)

                                         ggCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGAtctctc                                                <  2:1568674/93‑1 (MQ=255)

                                           cGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgc                                              >  1:3325883/1‑93 (MQ=255)

                                            gATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgca                                             <  1:3334792/93‑1 (MQ=255)

                                             aTTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcag                                            <  2:2110292/93‑1 (MQ=255)

                                             aTTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcag                                            >  2:174193/1‑93 (MQ=255)

                                             aTTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcag                                            >  2:1166944/1‑93 (MQ=255)

                                              ttCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcagg                                           >  2:1868146/1‑93 (MQ=255)

                                              ttCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcagg                                           <  1:1986921/93‑1 (MQ=255)

                                              ttCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcagg                                           <  1:4296450/93‑1 (MQ=255)

                                               tCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggc                                          <  2:2882941/93‑1 (MQ=255)

                                                 gcgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCgcaggcag                                        <  2:2095554/93‑1 (MQ=255)

                                                  cgTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGcaggcagg                                       <  1:1867119/93‑1 (MQ=255)

                                                   gTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGTGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAggg                                      >  2:2922022/1‑93 (MQ=255)

                                                   gTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCTCagggaggg                                      >  2:4048273/1‑93 (MQ=255)

                                                    ttGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAgggg                                     <  1:2028819/93‑1 (MQ=255)

                                                    ttGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAgggg                                     >  1:2606375/1‑93 (MQ=255)

                                                    ttGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAgggg                                     <  2:2104692/93‑1 (MQ=255)

                                                     tGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGt                                    <  2:4512338/93‑1 (MQ=255)

                                                     tGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGt                                    >  2:2323250/1‑93 (MQ=255)

                                                       ggACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGc                                  >  2:2831446/1‑93 (MQ=255)

                                                       ggACTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGc                                  >  1:2543750/1‑93 (MQ=255)

                                                         aCTGCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCg                                <  1:3699148/93‑1 (MQ=255)

                                                            gCACAAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTa                             <  2:2033427/93‑1 (MQ=255)

                                                              acaAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACa                           >  1:3020986/1‑93 (MQ=255)

                                                              acaAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACa                           <  1:1297012/93‑1 (MQ=255)

                                                               caAGAGCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACAt                          <  1:4417125/93‑1 (MQ=255)

                                                               caAGAGCTAGCTACTCTGCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACAt                          <  2:2089898/93‑1 (MQ=255)

                                                                 agagCTTGCTGCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTc                        <  2:1121018/93‑1 (MQ=255)

                                                                 agagCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTc                        >  1:1487033/1‑93 (MQ=255)

                                                                 agagCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTc                        <  1:4635046/93‑1 (MQ=255)

                                                                   agCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGa                      <  1:146980/93‑1 (MQ=255)

                                                                   agCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGa                      <  1:3148657/93‑1 (MQ=255)

                                                                   agCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGa                      <  2:3854464/93‑1 (MQ=255)

                                                                    gCTTGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGAc                     <  1:1717643/93‑1 (MQ=255)

                                                                       tGCTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGc                  >  2:2620253/1‑93 (MQ=255)

                                                                        gCTACTCTTCGGCGGATGCTTGCTATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCa                 <  1:623289/93‑1 (MQ=255)

                                                                         cTACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAt                >  1:2501694/1‑93 (MQ=255)

                                                                          tACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAtt               >  1:2870180/1‑93 (MQ=255)

                                                                          tACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAtt               <  2:1816924/93‑1 (MQ=255)

                                                                          tACTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAtt               <  2:3646576/93‑1 (MQ=255)

                                                                           tctctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAttt              <  1:2643802/92‑1 (MQ=255)

                                                                           tctctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAttt              <  1:2892363/92‑1 (MQ=255)

                                                                           tctctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAttt              <  1:2598750/92‑1 (MQ=255)

                                                                           aCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAttt              <  1:1049777/93‑1 (MQ=255)

                                                                           aCTCTTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCAttt              >  1:3795336/1‑93 (MQ=255)

                                                                            ctctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACATCAtttg             >  1:4580500/1‑92 (MQ=255)

                                                                             tctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCg            >  2:2113419/1‑93 (MQ=255)

                                                                             tctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCg            >  1:4449492/1‑93 (MQ=255)

                                                                             tctTCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCg            <  1:1374594/93‑1 (MQ=255)

                                                                               ttCGGCGGATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGc          >  1:316361/1‑93 (MQ=255)

                                                                                  ggcggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCa       <  1:4083601/93‑1 (MQ=255)

                                                                                   gcggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCAt      <  2:4250185/93‑1 (MQ=255)

                                                                                    cggATGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCAtt     <  2:4674276/93‑1 (MQ=255)

                                                                                     ggATGCTTGCCATTGTGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtg    <  2:2422743/93‑1 (MQ=255)

                                                                                       aTGCTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATtgat  <  2:866678/93‑1 (MQ=255)

AATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGAT  >  NC_000913/1493477‑1493656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`