BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,512,627	T→C	V258A (GTC→GCC)	b1442 →	putative transport system permease protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,512,627	0	T	C	100.0%	308.8 / NA	100	V258A (GTC→GCC)	b1442	putative transport system permease protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (42/58); total (42/58)

Only 100 of 104 total aligned reads displayed.

CCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGTCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATGGCGGC  >  NC_000913/1512537‑1512714

ccTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGccc                                                                                       >  1:3732726/1‑93 (MQ=255)

 cTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGcccc                                                                                      >  1:151435/1‑93 (MQ=255)

    tCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCa                                                                                   <  2:285658/93‑1 (MQ=255)

     cGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAg                                                                                  >  2:2654384/1‑93 (MQ=255)

     cGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAg                                                                                  <  1:1363601/93‑1 (MQ=255)

      gCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGc                                                                                 <  2:616485/93‑1 (MQ=255)

      gCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGc                                                                                 <  1:1353634/93‑1 (MQ=255)

       cTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCt                                                                                >  1:3425503/1‑93 (MQ=255)

        tATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtg                                                                               <  1:594459/93‑1 (MQ=255)

         aTGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtgg                                                                              >  2:1555090/1‑93 (MQ=255)

          tgtgGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggt                                                                             <  1:493551/93‑1 (MQ=255)

          tgtgGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggt                                                                             >  2:1087436/1‑93 (MQ=255)

          tgtgGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggt                                                                             <  2:3857743/93‑1 (MQ=255)

          tgtgGTGCTGCCGCTGGCAATCCCGGGTATGGCCGCTGGCTCTATCTTTCCCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggt                                                                             <  2:1965548/93‑1 (MQ=255)

           gtggtgCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggtt                                                                            <  2:3635528/93‑1 (MQ=255)

             ggtgCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCtggttgg                                                                          <  1:2378913/93‑1 (MQ=255)

                gctgcCGCTGGCAATCCCGGGTATTGCCGCTGGCTTTATCTTTCCCTTCTCACTCACACGGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcc                                                                       <  1:1109163/93‑1 (MQ=255)

                gctgcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcc                                                                       >  2:3042154/1‑93 (MQ=255)

                gcggcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcc                                                                       <  2:2144008/90‑1 (MQ=255)

                 ctgcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcct                                                                      <  1:195994/93‑1 (MQ=255)

                   gcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcctcc                                                                    >  1:469499/1‑93 (MQ=255)

                   gcCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGtcctcc                                                                    >  2:1315161/1‑93 (MQ=255)

                    ccGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCa                                                                   <  1:4674265/93‑1 (MQ=255)

                     cggtGGCAATCCTGGTTATTGCCGCTGGCTCTATCTTTCCCTTCCCACTCACACGGGGCAATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAg                                                                  <  2:133278/90‑1 (MQ=255)

                     cGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTCCCTTCTCCCTCCCCCTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAg                                                                  <  2:1844599/93‑1 (MQ=255)

                     cGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTCCCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAg                                                                  <  1:967131/93‑1 (MQ=255)

                     cGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTCCCTTCTCACTCACACGGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAg                                                                  <  1:2548941/93‑1 (MQ=255)

                     cGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAg                                                                  <  1:2777543/93‑1 (MQ=255)

                     cGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAg                                                                  <  1:3032639/93‑1 (MQ=255)

                       cTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGa                                                                <  2:2695461/93‑1 (MQ=255)

                         ggCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGata                                                              >  2:398629/1‑93 (MQ=255)

                             aTCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATAtttt                                                          >  2:3195966/1‑93 (MQ=255)

                               ccggggTAGTGCCGCTGGCTCTATCTTTACCTTCTCCCTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTAt                                                        <  2:2743744/90‑1 (MQ=255)

                               cccGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTAt                                                        <  1:470497/93‑1 (MQ=255)

                                ccGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATc                                                       <  1:3773306/93‑1 (MQ=255)

                                  gggTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCCGGATATTTTATCgg                                                     >  1:3791240/1‑93 (MQ=255)

                                       ttGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAata                                                >  2:1268264/1‑93 (MQ=255)

                                        tGCCGCTGGCTTTTTCTTTCCCTCCTCCCCCACACGGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAatat                                               <  1:3951353/93‑1 (MQ=255)

                                          ccGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATgg                                             <  1:4383640/93‑1 (MQ=255)

                                          ccGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATgg                                             <  2:2166052/93‑1 (MQ=255)

                                          ccGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATgg                                             >  1:2790949/1‑93 (MQ=255)

                                          ccGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATgg                                             <  1:1282009/93‑1 (MQ=255)

                                          ccGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATgg                                             >  2:3850323/1‑93 (MQ=255)

                                          ccGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATgg                                             <  1:1119895/93‑1 (MQ=255)

                                           cGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGt                                            >  1:3782533/1‑93 (MQ=255)

                                           cGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGt                                            <  1:3747583/93‑1 (MQ=255)

                                             cTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGttt                                          >  2:4215975/1‑93 (MQ=255)

                                             cTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGttt                                          >  1:1637801/1‑93 (MQ=255)

                                               ggCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTAt                                        <  2:4167847/93‑1 (MQ=255)

                                                gCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTAtt                                       >  2:1041421/1‑93 (MQ=255)

                                                gCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTAtt                                       <  1:1257913/93‑1 (MQ=255)

                                                  tctATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTAtttc                                     >  2:4043478/1‑91 (MQ=255)

                                                   ctATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTccc                                    <  2:574182/93‑1 (MQ=255)

                                                   ctATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTccc                                    >  1:1316039/1‑93 (MQ=255)

                                                    tATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCca                                   <  2:2335199/93‑1 (MQ=255)

                                                     aTCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCcag                                  >  1:1204717/1‑93 (MQ=255)

                                                     aTCTTTACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCcag                                  >  2:1172754/1‑93 (MQ=255)

                                                        tttACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCcagcag                               >  1:1941660/1‑93 (MQ=255)

                                                         ttACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAgg                              <  1:2688463/93‑1 (MQ=255)

                                                         ttACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAgg                              <  1:2129853/93‑1 (MQ=255)

                                                          tACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAggg                             <  2:1850286/93‑1 (MQ=255)

                                                          tACCTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAggg                             >  2:1924910/1‑93 (MQ=255)

                                                            ccTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAggggg                           >  2:2637994/1‑93 (MQ=255)

                                                             cTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTTTTCCCAGCAGGGGGc                          >  2:466059/1‑93 (MQ=255)

                                                             cTTCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGc                          >  2:75206/1‑93 (MQ=255)

                                                              ttCTCACTCACACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCg                         >  2:1137825/1‑93 (MQ=255)

                                                                ctcactcaCACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGAt                       <  2:609434/93‑1 (MQ=255)

                                                                 ccnctcncNCTGGGCGATTTTANCGCCCCGCAGCTGGTTNGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGAtt                      <  1:1350010/92‑1 (MQ=255)

                                                                  cactcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTg                     <  2:1420262/93‑1 (MQ=255)

                                                                   actcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTgg                    >  1:623743/1‑93 (MQ=255)

                                                                   actcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTgg                    >  2:4167561/1‑93 (MQ=255)

                                                                    ctcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGc                   <  1:4411702/93‑1 (MQ=255)

                                                                     tcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCa                  >  1:4205242/1‑93 (MQ=255)

                                                                     tcacACTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCa                  >  2:452013/1‑93 (MQ=255)

                                                                      cacaCTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCaa                 <  1:1027142/93‑1 (MQ=255)

                                                                      cacaCTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCaa                 >  2:4640094/1‑93 (MQ=255)

                                                                       caccTGGGGGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAat                <  1:1264194/90‑1 (MQ=255)

                                                                       acacTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAat                <  1:3575649/93‑1 (MQ=255)

                                                                        cacTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAata               <  1:800780/93‑1 (MQ=255)

                                                                         gcTGGGTGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGTTTTATTCCCAGCAGGGGGCGATTGGCAatat              <  2:4057496/92‑1 (MQ=255)

                                                                         ccTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAatat              <  1:536481/92‑1 (MQ=255)

                                                                         acTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAatat              >  2:4143173/1‑93 (MQ=255)

                                                                          cTGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATg             <  1:2264091/93‑1 (MQ=255)

                                                                           tGGGCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGc            <  2:3551299/93‑1 (MQ=255)

                                                                            gggCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGTCAATATGcc           >  2:3763873/1‑93 (MQ=255)

                                                                            gggCGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGcc           >  2:4344980/1‑93 (MQ=255)

                                                                            gggCAATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGcc           <  1:71833/93‑1 (MQ=255)

                                                                              gCGATTTTATCGCCCCGCAGCTTGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGa         <  2:3003247/93‑1 (MQ=255)

                                                                               cGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGAt        <  2:3652515/93‑1 (MQ=255)

                                                                               cGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGAt        <  2:2005700/93‑1 (MQ=255)

                                                                               cGATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGAt        <  2:433911/93‑1 (MQ=255)

                                                                                gATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATg       <  1:231936/93‑1 (MQ=255)

                                                                                gATTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATg       <  2:2815972/93‑1 (MQ=255)

                                                                                 aTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATgg      <  2:2821031/93‑1 (MQ=255)

                                                                                 aTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATgg      >  2:587446/1‑93 (MQ=255)

                                                                                 aTTTTATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATgg      >  2:1602746/1‑93 (MQ=255)

                                                                                  ttttATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATggc     >  2:349884/1‑93 (MQ=255)

                                                                                  ttttATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATggc     >  2:1435303/1‑93 (MQ=255)

                                                                                    ttATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATggcgg   >  1:3456796/1‑93 (MQ=255)

                                                                                     tATCGCCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATggcggc  >  2:1616143/1‑93 (MQ=255)

CCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGTCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATGGCGGC  >  NC_000913/1512537‑1512714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`