BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,566,541	T→C	I103V (ATA→GTA)	b1491 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,566,541	0	T	C	99.0%	319.3 / NA	102	I103V (ATA→GTA)	b1491	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (46/55); minor base A (0/1); total (46/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 105 total aligned reads displayed.

TCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTATGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAACCGAG  >  NC_000913/1566451‑1566629

tCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGc                                                                                        >  1:2516606/1‑93 (MQ=255)

  ttACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCg                                                                                      >  1:1360941/1‑93 (MQ=255)

  ttACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCg                                                                                      >  2:2045805/1‑93 (MQ=255)

   tACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCga                                                                                     <  2:3494737/93‑1 (MQ=255)

     ccGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCgaga                                                                                   <  1:3506667/93‑1 (MQ=255)

      cGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGAc                                                                                  <  2:1638722/93‑1 (MQ=255)

        gTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGt                                                                                <  2:4128882/93‑1 (MQ=255)

         tCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGtt                                                                               >  2:1967442/1‑93 (MQ=255)

         tCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGtt                                                                               >  2:4103926/1‑93 (MQ=255)

           aTAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCCGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGc                                                                             <  1:461463/93‑1 (MQ=255)

            tAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCa                                                                            <  1:2447690/93‑1 (MQ=255)

            tAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCa                                                                            >  1:3676572/1‑93 (MQ=255)

             aaGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAg                                                                           >  2:3462773/1‑93 (MQ=255)

              aGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAga                                                                          <  2:1920038/93‑1 (MQ=255)

                 tCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAgatga                                                                       <  2:3233626/93‑1 (MQ=255)

                  cgcaCCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCTTGTTTACGCCGAGACGTTGCAgatgat                                                                      <  1:1334303/90‑1 (MQ=255)

                  cGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAgatgat                                                                      <  1:1334304/93‑1 (MQ=255)

                   ggACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATc                                                                     <  2:650562/93‑1 (MQ=255)

                    gACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATcc                                                                    <  1:1626424/93‑1 (MQ=255)

                    gACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATca                                                                    >  1:2222698/1‑92 (MQ=255)

                     aCCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCa                                                                   >  1:2944902/1‑93 (MQ=255)

                       cACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGt                                                                 <  1:559549/93‑1 (MQ=255)

                        aCGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAACAAGACCGTGTTTACGCCGATGCGTTGCAGGTGATCCAGtt                                                                >  1:3691214/1‑93 (MQ=255)

                         cGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGttt                                                               <  2:1192960/93‑1 (MQ=255)

                          ggCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTg                                                              <  2:2630030/93‑1 (MQ=255)

                           gCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGt                                                             >  2:2431066/1‑93 (MQ=255)

                           gCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGt                                                             <  2:2631957/93‑1 (MQ=255)

                           gCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGt                                                             <  1:1022492/93‑1 (MQ=255)

                           gCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGt                                                             >  1:1925399/1‑93 (MQ=255)

                             aaaaTTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCg                                                           >  1:1415738/1‑93 (MQ=255)

                               aaTTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGat                                                         <  2:1492351/93‑1 (MQ=255)

                                aTTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGatc                                                        >  2:543074/1‑93 (MQ=255)

                                aTTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGatc                                                        <  2:2929063/93‑1 (MQ=255)

                                 ttttCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGatca                                                       <  1:2101283/93‑1 (MQ=255)

                                  tttCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGatcat                                                      >  2:208052/1‑93 (MQ=255)

                                  tttCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGatcat                                                      <  1:3686775/93‑1 (MQ=255)

                                    tCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCg                                                    >  2:4484554/1‑93 (MQ=255)

                                    tCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCg                                                    >  1:1662562/1‑93 (MQ=255)

                                       aTGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCt                                                 <  1:4281300/93‑1 (MQ=255)

                                         ggCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCtgt                                               <  1:89775/93‑1 (MQ=255)

                                         ggCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCtgt                                               <  1:1235001/93‑1 (MQ=255)

                                         ggCCACAGGGCGGTACCGTCCGGATTGACCTGGAAAAAGACAGTGTTTAAGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCtgt                                               <  2:4683784/93‑1 (MQ=255)

                                         gacaacaGGGCGGTGCCGTCCGGCTTGACCTGGAAAAGGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCtgt                                               <  2:3687383/89‑1 (MQ=255)

                                          gCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCtgtt                                              <  2:3285964/93‑1 (MQ=255)

                                            cacaGGGGGGTACCGCCCGGCTTGACCTGGAAAAAGACCGTGTTTTCGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCtgttgt                                            <  1:1785624/93‑1 (MQ=255)

                                            cacaGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCtgttgt                                            >  1:367122/1‑93 (MQ=255)

                                              caGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCtgttgttg                                          >  1:3463036/1‑93 (MQ=255)

                                               aGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCtgttgttgt                                         <  1:4347932/93‑1 (MQ=255)

                                                 ggCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTac                                       <  1:664729/93‑1 (MQ=255)

                                                  gCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTaca                                      <  1:1344842/93‑1 (MQ=255)

                                                   cGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTacac                                     <  2:790408/93‑1 (MQ=255)

                                                    ggTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACg                                    >  1:830894/1‑93 (MQ=255)

                                                     gTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACgg                                   <  1:1883797/93‑1 (MQ=255)

                                                      tACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCTCCTGTTGTTGTACACggg                                  <  2:3711745/93‑1 (MQ=255)

                                                         cGTCCGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGccc                               <  2:2257612/93‑1 (MQ=255)

                                                            ccGGCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGc                            <  1:3705979/93‑1 (MQ=255)

                                                               gCTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCtgg                         >  2:2408973/1‑93 (MQ=255)

                                                                cTTGACCTGGAAACAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCtggt                        <  1:2678231/93‑1 (MQ=255)

                                                                cTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCtggt                        <  2:878910/93‑1 (MQ=255)

                                                                cTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCtggt                        <  2:2103682/93‑1 (MQ=255)

                                                                cTTGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCtggt                        <  1:833934/93‑1 (MQ=255)

                                                                 ttGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCtggtg                       >  1:3900159/1‑93 (MQ=255)

                                                                  tGACCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCTCCTGTTGTTGTACACGGGCCCGGCtggtgg                      <  1:1194505/93‑1 (MQ=255)

                                                                    aCCTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTgggg                    >  2:1817010/1‑93 (MQ=255)

                                                                     ccTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGt                   >  1:649672/1‑93 (MQ=255)

                                                                     ccTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGt                   >  1:3913631/1‑93 (MQ=255)

                                                                      cTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGtt                  >  1:3921560/1‑93 (MQ=255)

                                                                      cTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGtt                  >  1:1623058/1‑93 (MQ=255)

                                                                      cTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGtt                  <  1:652922/93‑1 (MQ=255)

                                                                      cTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGtt                  >  1:3504310/1‑93 (MQ=255)

                                                                      cTGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGtt                  <  1:2584313/93‑1 (MQ=255)

                                                                       tGGAAAAAGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTa                 <  1:2450961/93‑1 (MQ=255)

                                                                        ggAAAAAGACCGTGTTTACGCCGAGACCTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGGGGTGTTAc                >  2:1237710/1‑93 (MQ=255)

                                                                          aaaaaGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTa              >  2:1201883/1‑93 (MQ=255)

                                                                          aaaaaGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTa              >  1:2911379/1‑93 (MQ=255)

                                                                           aaaaGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTaa             >  2:1440685/1‑93 (MQ=255)

                                                                           aaaaGACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTaa             <  1:1681019/93‑1 (MQ=255)

                                                                               gACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGtt         >  1:2546829/1‑93 (MQ=255)

                                                                               gACCGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGGGGGGTTACTAATGtt         >  2:4271043/1‑93 (MQ=255)

                                                                               gACCGTGTTTACCCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCCGCTGGTGGGGTTACTAATGtt         >  1:752520/1‑93 (MQ=255)

                                                                                 ccGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTaa       >  2:2474295/1‑93 (MQ=255)

                                                                                 ccGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTaa       <  1:1201883/93‑1 (MQ=255)

                                                                                 ccGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCCGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTaa       <  1:2516567/93‑1 (MQ=255)

                                                                                  cGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAc      >  2:2537670/1‑93 (MQ=255)

                                                                                  cGTGTTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAc      <  1:1746032/93‑1 (MQ=255)

                                                                                   gtgtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGGTCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAcc     >  2:4145550/1‑93 (MQ=255)

                                                                                   gtgtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAcc     <  1:3228407/93‑1 (MQ=255)

                                                                                   gtgtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAcc     >  1:2748147/1‑93 (MQ=255)

                                                                                   gtgtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAcc     <  1:3890621/93‑1 (MQ=255)

                                                                                   gtgtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAcc     <  2:679027/93‑1 (MQ=255)

                                                                                   gtgtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAcc     <  1:1630439/93‑1 (MQ=255)

                                                                                   gtgtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAcc     <  1:970833/93‑1 (MQ=255)

                                                                                    tgtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAACCg    >  1:1029439/1‑93 (MQ=255)

                                                                                    tgtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAACCg    >  2:281944/1‑93 (MQ=255)

                                                                                     gtTTACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAACCGa   >  1:1651317/1‑93 (MQ=255)

                                                                                      tttACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAACCGAg  <  2:2908818/93‑1 (MQ=255)

                                                                                      tttACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAACCGAg  >  1:529968/1‑93 (MQ=255)

                                                                                      tttACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAACCGAg  <  1:1420547/93‑1 (MQ=255)

                                                                                      tttACGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAAACGAg  >  2:1957337/1‑93 (MQ=255)

                                                                                      tttACGCCGAGACGTTGCAGATGATCCACTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCAGGCTAGTGCGGTTACTAATGTTAACCgcg  >  1:1257697/1‑91 (MQ=255)

TCTTACCGGTCATAAGATCGGACCACGGCAAAATTTTCGATGGCCACAGGGCGGTACCGTCCGGCTTGACCTGGAAAAAGACCGTGTTTATGCCGAGACGTTGCAGATGATCCAGTTTGTCGATCATCGCCTGTTGTTGTACACGGGCCCGGCTGGTGGGGTTACTAATGTTAACCGAG  >  NC_000913/1566451‑1566629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`