BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,619,900	T→C	V182A (GTA→GCA)	ydeF →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,619,900	0	T	C	100.0%	373.6 / NA	118	V182A (GTA→GCA)	ydeF	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (54/64); total (54/64)

Only 100 of 120 total aligned reads displayed.

GCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTA  >  NC_000913/1619810‑1619989

gCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCACATTTGGGCaa                                                                                         >  1:3047332/1‑93 (MQ=255)

 cACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCaaa                                                                                        <  1:4600309/93‑1 (MQ=255)

  aCGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAg                                                                                       >  2:3452507/1‑93 (MQ=255)

  aCGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTCCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAg                                                                                       >  1:3114535/1‑93 (MQ=255)

   cGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAgc                                                                                      <  1:3164578/93‑1 (MQ=255)

      tGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCa                                                                                   >  2:2221654/1‑93 (MQ=255)

      tGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCa                                                                                   <  1:4646485/93‑1 (MQ=255)

       gTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAg                                                                                  <  2:3940730/93‑1 (MQ=255)

        ttGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGc                                                                                 <  2:4532936/93‑1 (MQ=255)

          ggTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGGTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCga                                                                               >  1:2766488/1‑93 (MQ=255)

            tAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCgaga                                                                             <  1:3840658/93‑1 (MQ=255)

               tGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGaaaa                                                                          <  1:667529/93‑1 (MQ=255)

               tGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGaaaa                                                                          >  2:1274516/1‑93 (MQ=255)

                gCAGAGCATCAATCTGCCCTTCTGGGTGGCAGCTATCTGGTCCGCGTTTCACATGCTTTTCATTCCAATTTGGGCAAAGTGCAGGGAGAAAat                                                                         >  2:2874222/1‑93 (MQ=255)

                  agagCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAatca                                                                       <  2:3208327/93‑1 (MQ=255)

                   gagCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAatcat                                                                      <  1:3613103/93‑1 (MQ=255)

                    agCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAatcatc                                                                     <  1:3452507/93‑1 (MQ=255)

                    agCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAatcatc                                                                     <  1:4134831/93‑1 (MQ=255)

                      cATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGc                                                                   <  1:1377327/93‑1 (MQ=255)

                       aTCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGcc                                                                  >  2:2642357/1‑93 (MQ=255)

                           aTCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACgg                                                              <  1:4434982/93‑1 (MQ=255)

                           aTCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACgg                                                              >  2:2833913/1‑93 (MQ=255)

                            tCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGa                                                             >  1:3945274/1‑93 (MQ=255)

                              tGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGaaa                                                           >  1:3878489/1‑93 (MQ=255)

                              tGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGaaa                                                           <  2:2129408/93‑1 (MQ=255)

                               gCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAAc                                                          <  1:3034891/93‑1 (MQ=255)

                               gCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAAc                                                          <  1:3210798/93‑1 (MQ=255)

                               gCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGACACCGAGAc                                                          >  2:3043120/1‑93 (MQ=255)

                                cccTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACa                                                         <  1:553608/93‑1 (MQ=255)

                                cccTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACa                                                         <  2:2320281/93‑1 (MQ=255)

                                 ccTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGACACAg                                                        >  2:2055923/1‑93 (MQ=255)

                                 ccTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAg                                                        <  1:3378224/93‑1 (MQ=255)

                                   ttCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGc                                                      >  2:4077530/1‑93 (MQ=255)

                                     ctggctggCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAGGCGCAGCGAGAAAATCATCGTAACGGCAGCGGGCAg                                                    >  2:1185289/1‑93 (MQ=255)

                                      tggctggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAgt                                                   <  2:1202584/93‑1 (MQ=255)

                                      tggctggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAgt                                                   <  2:2473996/93‑1 (MQ=255)

                                        gctggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAgtgt                                                 <  2:3229155/93‑1 (MQ=255)

                                          tggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCt                                               <  2:1475494/93‑1 (MQ=255)

                                          tggcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCt                                               <  1:1509794/93‑1 (MQ=255)

                                            gcAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTgg                                             >  1:3108783/1‑93 (MQ=255)

                                               gCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCg                                          >  2:2378400/1‑93 (MQ=255)

                                                cTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGc                                         <  1:4263949/93‑1 (MQ=255)

                                                 tATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGcc                                        >  2:935616/1‑93 (MQ=255)

                                                   tCTGTTCCGCGTTTCCCATGCTTTTCATTCACATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGCCGCCGa                                      >  1:1330578/1‑93 (MQ=255)

                                                    cTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGGAACAGGCAGGGTCTGGCCGCCGaa                                     >  2:3212417/1‑93 (MQ=255)

                                                     tGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGGAACAGGCAGTGTCTGGTCGCCGaaa                                    >  1:1894254/1‑93 (MQ=255)

                                                     tGTTCCGCGTTTCCCATGCTTTTCAGTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGaaa                                    <  1:2031372/93‑1 (MQ=255)

                                                      gTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAg                                   <  2:3370723/93‑1 (MQ=255)

                                                      gTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAg                                   <  2:2906338/93‑1 (MQ=255)

                                                       ttCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGt                                  <  1:2099105/93‑1 (MQ=255)

                                                           gcgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTtta                              <  1:3160926/93‑1 (MQ=255)

                                                           ccgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTtta                              <  2:780696/92‑1 (MQ=255)

                                                            cgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttat                             >  1:37299/1‑93 (MQ=255)

                                                            cgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttat                             <  1:3461335/93‑1 (MQ=255)

                                                            cgTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttat                             >  2:1105861/1‑93 (MQ=255)

                                                             gTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttatt                            >  1:3330738/1‑93 (MQ=255)

                                                             gTTTCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttatt                            <  1:100040/93‑1 (MQ=255)

                                                              tttCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTttatta                           <  1:2704824/93‑1 (MQ=255)

                                                               ttCCCATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGACACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTAc                          >  2:1123375/1‑93 (MQ=255)

                                                                 cccATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACaa                        <  2:3771569/93‑1 (MQ=255)

                                                                 cccATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACaa                        >  1:4244877/1‑93 (MQ=255)

                                                                   cATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGa                      >  1:4184868/1‑93 (MQ=255)

                                                                   cATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGa                      <  2:3737132/93‑1 (MQ=255)

                                                                   cATGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGa                      >  1:4132760/1‑93 (MQ=255)

                                                                    aTGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGAt                     >  1:2665367/1‑93 (MQ=255)

                                                                    aTGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGAt                     <  2:3098487/93‑1 (MQ=255)

                                                                     tGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATa                    >  2:1345748/1‑93 (MQ=255)

                                                                     tGCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGGCGCCGAAAGTTTTATTACAAGATa                    >  2:3905262/1‑93 (MQ=255)

                                                                      gCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaa                   <  1:2117962/93‑1 (MQ=255)

                                                                      gCTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaa                   <  2:446200/93‑1 (MQ=255)

                                                                       cTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaaa                  <  2:4510632/93‑1 (MQ=255)

                                                                       cTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaaa                  <  1:1051213/93‑1 (MQ=255)

                                                                       cTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaaa                  <  1:2369624/93‑1 (MQ=255)

                                                                       cTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaaa                  <  1:990386/93‑1 (MQ=255)

                                                                       cTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaaa                  >  1:4387207/1‑93 (MQ=255)

                                                                       cTTTTCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaaa                  <  1:3443015/93‑1 (MQ=255)

                                                                        ttttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATaaac                 <  2:4503545/93‑2 (MQ=255)

                                                                        ttttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAg                 >  1:4381936/1‑93 (MQ=255)

                                                                        ttttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAg                 >  1:4369256/1‑93 (MQ=255)

                                                                         tttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGc                <  1:1737829/93‑1 (MQ=255)

                                                                         tttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGc                >  2:1195276/1‑93 (MQ=255)

                                                                         tttCATTCAAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGc                <  1:2794241/93‑1 (MQ=255)

                                                                          ttcattcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCa               >  1:328914/1‑93 (MQ=255)

                                                                          ttcattcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCa               <  2:959221/93‑1 (MQ=255)

                                                                          ttcattcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTAAAAGATAAAGCa               >  1:4378374/1‑93 (MQ=255)

                                                                           tcattcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCAc              >  2:205512/1‑93 (MQ=255)

                                                                           tcattcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCAc              <  2:2721268/93‑1 (MQ=255)

                                                                              ttcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACtgt           >  1:2410714/1‑93 (MQ=255)

                                                                               tcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAACGTTTTATTACAAGATAAAGCACtgtt          >  1:2627517/1‑93 (MQ=255)

                                                                               tcaAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACtgtt          <  1:3899602/93‑1 (MQ=255)

                                                                                caAATTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACtgttg         <  2:1964567/93‑1 (MQ=255)

                                                                                  aaTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTtgtg       <  2:644121/93‑1 (MQ=255)

                                                                                   aTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTgg      >  1:4047274/1‑93 (MQ=255)

                                                                                   aTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTgg      >  2:1252809/1‑93 (MQ=255)

                                                                                   aTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTgg      >  2:1252810/1‑93 (MQ=255)

                                                                                   aTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTgg      >  1:1907870/1‑93 (MQ=255)

                                                                                   aTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTgg      >  2:4636316/1‑93 (MQ=255)

                                                                                   aTTTGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTgg      >  2:940704/1‑93 (MQ=255)

                                                                                    tttGGGCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGt     >  1:1393935/1‑93 (MQ=255)

                                                                                       gggCAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTa  >  1:2538878/1‑93 (MQ=255)

GCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTA  >  NC_000913/1619810‑1619989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`