BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,642,279	A→G	V30A (GTC→GCC)	b1560 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,642,279	0	A	G	100.0%	319.7 / NA	102	V30A (GTC→GCC)	b1560	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (62/40); total (62/40)

Only 100 of 108 total aligned reads displayed.

TGGCAGATTACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGACCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACGCAC  >  NC_000913/1642191‑1642367

tGGCAGATTACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGgccac                                                                                      >  1:312884/1‑93 (MQ=255)

tGGCAGATTACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGgccac                                                                                      >  2:4416131/1‑93 (MQ=255)

   cAGATTACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGCGGATTATGAAATATCTGGATGGATTCACGGACCGGCATAAGGGCCACCAg                                                                                   >  1:2083607/1‑93 (MQ=255)

    aGATTACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGc                                                                                  >  2:1108826/1‑93 (MQ=255)

    aGATTACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGc                                                                                  >  1:1560935/1‑93 (MQ=255)

      aTTACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAGTATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGccc                                                                                >  1:2749173/1‑93 (MQ=255)

      aTTACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGccc                                                                                <  2:2917214/93‑1 (MQ=255)

       ttACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCa                                                                               >  1:863585/1‑93 (MQ=255)

       ttACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCa                                                                               >  2:1201331/1‑93 (MQ=255)

        tACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCaa                                                                              <  2:4456203/93‑1 (MQ=255)

        tACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCaa                                                                              <  2:263708/93‑1 (MQ=255)

        tACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCaa                                                                              <  2:2689596/93‑1 (MQ=255)

           gCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCt                                                                           <  2:1514297/93‑1 (MQ=255)

            cATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTc                                                                          >  1:3085330/1‑93 (MQ=255)

             aTGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCa                                                                         <  1:3248287/93‑1 (MQ=255)

              tGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAg                                                                        >  2:2556641/1‑93 (MQ=255)

              tGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAg                                                                        >  1:2421447/1‑93 (MQ=255)

               gCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAgg                                                                       >  2:3813365/1‑93 (MQ=255)

                cTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGc                                                                      <  1:3339790/93‑1 (MQ=255)

                cTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGc                                                                      <  2:607299/93‑1 (MQ=255)

                 tttttGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCa                                                                     >  2:2057620/1‑93 (MQ=255)

                  ttttGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCCAGCTCAGGCAc                                                                    >  1:1559273/1‑93 (MQ=255)

                   tttGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCAcc                                                                   <  2:3383133/93‑1 (MQ=255)

                    ttGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCa                                                                  >  1:339443/1‑93 (MQ=255)

                    ttGGTTCCGGTACCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCa                                                                  <  2:579415/93‑1 (MQ=255)

                       gttccggttccACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGaa                                                               <  2:1784977/93‑1 (MQ=255)

                       gttccggttccACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGaa                                                               >  1:1024192/1‑93 (MQ=255)

                        ttccggttgcTCCAGCACTCGAGTATTATGAAATATCTCTATGTATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCCCCAGAAc                                                              <  1:3254342/93‑1 (MQ=255)

                        ttccggttccACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAAc                                                              <  1:1083003/93‑1 (MQ=255)

                          ccggttccACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAg                                                            >  1:3483756/1‑93 (MQ=255)

                          ccggtgccACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAg                                                            <  1:2140044/93‑1 (MQ=255)

                             gttccACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTc                                                         >  1:1243529/1‑93 (MQ=255)

                              ttccACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCt                                                        >  2:3758712/1‑93 (MQ=255)

                               tccACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTa                                                       <  2:1735242/93‑1 (MQ=255)

                                cagccaGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTaa                                                      <  2:914019/90‑1 (MQ=255)

                                 caccaGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAg                                                     >  1:3948723/1‑93 (MQ=255)

                                  accaGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGt                                                    <  2:3343948/93‑1 (MQ=255)

                                   ccaGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTa                                                   >  1:4008199/1‑93 (MQ=255)

                                   ccaGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTa                                                   >  1:776176/1‑93 (MQ=255)

                                    caGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTaa                                                  <  1:3600735/93‑1 (MQ=255)

                                     aGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAAt                                                 <  2:1168136/93‑1 (MQ=255)

                                     aGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAAt                                                 <  2:3766087/93‑1 (MQ=255)

                                      gCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATa                                                >  1:2160935/1‑93 (MQ=255)

                                        aCTCGAGGGTTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAAAAGGTCTAAGTAATAcc                                              >  1:988547/1‑93 (MQ=255)

                                            gAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCa                                          <  1:1232561/93‑1 (MQ=255)

                                            gAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCa                                          >  1:2824849/1‑93 (MQ=255)

                                             aGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCAc                                         <  2:4281057/93‑1 (MQ=255)

                                              ggATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACg                                        >  2:1112116/1‑93 (MQ=255)

                                              ggATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACg                                        >  2:3416940/1‑93 (MQ=255)

                                              ggATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACg                                        >  1:3922650/1‑93 (MQ=255)

                                               gATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGt                                       >  2:3731492/1‑93 (MQ=255)

                                               gATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGt                                       <  2:462090/93‑1 (MQ=255)

                                                aTTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGtt                                      >  2:1353439/1‑93 (MQ=255)

                                                aTTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGtt                                      >  2:696283/1‑93 (MQ=255)

                                                 ttATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTa                                     >  2:1128012/1‑93 (MQ=255)

                                                  tATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTAc                                    <  1:66952/93‑1 (MQ=255)

                                                   aTGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTAcc                                   >  2:2720177/1‑93 (MQ=255)

                                                   aTGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTAcc                                   <  1:1380814/93‑1 (MQ=255)

                                                    tGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCt                                  >  1:3763499/1‑93 (MQ=255)

                                                      aaaTATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTcc                                >  1:3592372/1‑93 (MQ=255)

                                                       aaTATCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCa                               >  1:4230336/1‑93 (MQ=255)

                                                         tatCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGa                             >  1:1291034/1‑93 (MQ=255)

                                                         tatCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGACTAAGTAATACCCGCACGTTACCTCCAGa                             >  1:2445207/1‑93 (MQ=255)

                                                          atCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGAt                            <  1:3395480/93‑1 (MQ=255)

                                                          atCTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGCCTAAGTAATACCCGCACGTTAACTCCAgct                            >  2:1045574/1‑91 (MQ=255)

                                                            cTGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATcc                          >  2:246576/1‑93 (MQ=255)

                                                             tGTATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCg                         <  2:4047971/93‑1 (MQ=255)

                                                               tATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGtt                       <  1:3426181/93‑1 (MQ=255)

                                                               tATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGtt                       >  2:3587948/1‑93 (MQ=255)

                                                               tATGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGtt                       >  2:240067/1‑93 (MQ=255)

                                                                 tGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGc                     >  2:4656463/1‑93 (MQ=255)

                                                                 tGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGc                     >  1:3035660/1‑93 (MQ=255)

                                                                 tGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGc                     >  1:676450/1‑93 (MQ=255)

                                                                 tGGATTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGc                     >  1:157540/1‑93 (MQ=255)

                                                                    aTTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCATAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTgg                  >  1:1176045/1‑93 (MQ=255)

                                                                    aTTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTgg                  >  1:3853244/1‑93 (MQ=255)

                                                                    aTTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTgg                  >  1:4150029/1‑93 (MQ=255)

                                                                    aTTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTgg                  <  1:4155786/93‑1 (MQ=255)

                                                                    aTTCACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTgg                  <  1:4442607/93‑1 (MQ=255)

                                                                      tCACGGCCCGGCTGAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATCCCCGCACGTTACCTCCAGATCCGTTGCTGGaa                <  2:567072/93‑1 (MQ=255)

                                                                       cACGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGaaa               >  2:3974353/1‑93 (MQ=255)

                                                                         cGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGt             <  2:3351786/93‑1 (MQ=255)

                                                                         cGGCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGt             <  1:1401564/93‑1 (MQ=255)

                                                                          ggCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTg            <  1:4052426/93‑1 (MQ=255)

                                                                           gCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGc           >  1:4193209/1‑93 (MQ=255)

                                                                           gCCCGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGc           >  1:2034318/1‑93 (MQ=255)

                                                                             ccGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCgg         <  2:1173175/93‑1 (MQ=255)

                                                                             ccGGCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCgg         <  1:2209795/93‑1 (MQ=255)

                                                                               ggCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGa       <  2:2989560/93‑1 (MQ=255)

                                                                                gCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGAc      >  2:1116854/1‑93 (MQ=255)

                                                                                gCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGAc      >  2:1840634/1‑93 (MQ=255)

                                                                                gCTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGAc      >  1:1591341/1‑93 (MQ=255)

                                                                                 cTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACg     <  1:1590658/93‑1 (MQ=255)

                                                                                 cTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACg     >  1:3076865/1‑93 (MQ=255)

                                                                                 cTTAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACg     >  1:2699782/1‑93 (MQ=255)

                                                                                  ttAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACGc    >  2:3640422/1‑93 (MQ=255)

                                                                                  ttAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACGc    >  1:4217790/1‑93 (MQ=255)

                                                                                   tAAGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACGCa   >  1:3892129/1‑93 (MQ=255)

                                                                                    aaGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACGCAc  >  1:3086878/1‑93 (MQ=255)

                                                                                    aaGGGCCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACGCAc  <  2:3571968/93‑1 (MQ=255)

TGGCAGATTACGCATGCTTTTTGGTTCCGGTTCCACCAGCACTCGAGGATTATGAAATATCTGTATGGATTCACGGCCCGGCTTAAGGACCACCAGCCCAAGCTCAGGCACCAGAACAGGTCTAAGTAATACCCGCACGTTACCTCCAGATCCGTTGCTGGAAAGTGCGGGACGCAC  >  NC_000913/1642191‑1642367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`