Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,656,923 T→C P277P (CCT→CCC)  b1587 → putative oxidoreductase major subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,656,9230TC99.1% 322.0 / ‑4.9 105P277P (CCT→CCC) b1587putative oxidoreductase major subunit
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (45/59);  total (46/59)
Fisher's exact test for biased strand distribution p-value = 4.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01

Only 100 of 109 total aligned reads displayed.

AAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCTATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGA  >  NC_000913/1656833‑1657009
                                                                                          |                                                                                      
aaaaGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCAt                                                                                      >  2:775355/1‑93 (MQ=255)
 aaaGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCAtt                                                                                     >  1:3878463/1‑93 (MQ=255)
  aaGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTc                                                                                    <  2:1374971/93‑1 (MQ=255)
  aaGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGAAGAATGGCTCCCCATTc                                                                                    >  1:3858800/1‑93 (MQ=255)
     cgcgcgAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGcc                                                                                 <  1:2892964/93‑1 (MQ=255)
      gcgcgAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGccc                                                                                >  2:1679300/1‑93 (MQ=255)
        gcgAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCgg                                                                              >  1:2147615/1‑93 (MQ=255)
        gcgAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCgg                                                                              <  1:1859673/93‑1 (MQ=255)
          gagaAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGc                                                                            >  1:511941/1‑93 (MQ=255)
           agaAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCa                                                                           >  2:4672926/1‑93 (MQ=255)
            gaAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCAc                                                                          >  1:600857/1‑93 (MQ=255)
             aaaTCGAACGCGAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCAcc                                                                         <  1:3713637/93‑1 (MQ=255)
             aaaTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCAcc                                                                         <  1:674786/93‑1 (MQ=255)
              aaTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCg                                                                        >  1:195580/1‑93 (MQ=255)
               aTCGAACTCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGa                                                                       <  2:1669142/93‑1 (MQ=255)
               aTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGa                                                                       <  2:1392322/93‑1 (MQ=255)
               aTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGa                                                                       <  1:2272927/93‑1 (MQ=255)
               aTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGa                                                                       <  2:1613382/93‑1 (MQ=255)
               aTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGa                                                                       >  2:3990184/1‑93 (MQ=255)
               aTCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGa                                                                       >  1:2803806/1‑93 (MQ=255)
                tCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGAt                                                                      <  1:846866/93‑1 (MQ=255)
                 cGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATg                                                                     >  2:528650/1‑93 (MQ=255)
                  gAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGc                                                                    <  1:2700440/93‑1 (MQ=255)
                  gAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGc                                                                    <  1:2918964/93‑1 (MQ=255)
                   aaCGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGcc                                                                   <  2:1766567/93‑1 (MQ=255)
                    aCGGCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGCTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCcg                                                                  <  1:773214/93‑1 (MQ=255)
                    aCGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCcg                                                                  >  2:2699948/1‑93 (MQ=255)
                     cGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCcgc                                                                 >  1:11812/1‑93 (MQ=255)
                       ccAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGACgcgc                                                               >  2:156988/1‑93 (MQ=255)
                        cAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCt                                                              >  1:2782321/1‑93 (MQ=255)
                         aaaaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTg                                                             >  1:4441093/1‑93 (MQ=255)
                         aaaaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTg                                                             >  1:3022415/1‑93 (MQ=255)
                         aaaaTGATTGTTATCGATCCGCAATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTg                                                             <  2:2577928/93‑1 (MQ=255)
                          aaaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTgg                                                            >  1:2348961/1‑93 (MQ=255)
                          aaaTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTgg                                                            >  1:1560916/1‑93 (MQ=255)
                           aaTGATTGTTATCTATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGt                                                           <  2:3470941/93‑1 (MQ=255)
                            aTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGGTCCCCATTCGCCCGGGCACCGACGCCGCGCTCGtg                                                          >  2:739902/1‑92 (MQ=255)
                            aTGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGtt                                                          <  1:2273966/93‑1 (MQ=255)
                              gATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGc                                                        >  2:3504303/1‑93 (MQ=255)
                              gATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGc                                                        <  1:2197250/93‑1 (MQ=255)
                               aTTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGGTGCg                                                       >  2:4359941/1‑93 (MQ=255)
                                ttGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCgg                                                      >  1:1692073/1‑93 (MQ=255)
                                ttGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCgg                                                      <  2:961416/93‑1 (MQ=255)
                                 tGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCggg                                                     <  1:2355296/93‑1 (MQ=255)
                                  tttATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGt                                                    <  1:1231031/92‑1 (MQ=255)
                                  gTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGt                                                    >  1:4122463/1‑93 (MQ=255)
                                   ttATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTa                                                   <  1:1166019/93‑1 (MQ=255)
                                     aTCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAtt                                                 >  1:2847164/1‑93 (MQ=255)
                                     aTCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAtt                                                 <  1:4097535/93‑1 (MQ=255)
                                     aTCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTAtt                                                 >  1:2536411/1‑93 (MQ=255)
                                     aTCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCAGCGCTGGATGCGGGGAtt                                                 >  2:4299466/1‑93 (MQ=255)
                                      tCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTg                                                >  1:4638149/1‑93 (MQ=255)
                                       cGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCTCTGGTTGCGGGTATTGc                                               <  2:988111/93‑1 (MQ=255)
                                        gATCCGCGATATACCGATACGACTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGCTGCGGGTATTGcc                                              >  1:4649211/1‑93 (MQ=255)
                                          tCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTg                                            >  2:1807089/1‑93 (MQ=255)
                                           ccGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTgg                                           <  1:4319695/93‑1 (MQ=255)
                                            cgcgATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTggg                                          >  2:3355769/1‑93 (MQ=255)
                                             gcgATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATGCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGt                                         <  1:1466328/93‑1 (MQ=255)
                                              cgATATCCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTa                                        <  1:3100297/93‑1 (MQ=255)
                                               gATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCTATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTAt                                       >  1:2653166/1‑93 (MQ=255)
                                               gATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCCCCGATGCCGCGCTGCTTGCGGGGCTTGCCTGGGTAt                                       >  1:3318558/1‑93 (MQ=255)
                                               gATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTAt                                       <  1:749612/93‑1 (MQ=255)
                                               gATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTAt                                       >  1:2652678/1‑93 (MQ=255)
                                                atatACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTAtt                                      <  2:2933705/93‑1 (MQ=255)
                                                atatACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTAtt                                      <  2:1448888/93‑1 (MQ=255)
                                                 tataCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTg                                     >  2:2829761/1‑93 (MQ=255)
                                                 tataCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTg                                     >  1:3902618/1‑93 (MQ=255)
                                                  ataCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGa                                    <  2:3384562/93‑1 (MQ=255)
                                                  ataCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGa                                    <  2:3384686/93‑1 (MQ=255)
                                                   taCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGAt                                   >  1:972461/1‑93 (MQ=255)
                                                    aCCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCTGGTATTGCCTGGGTATTGAtt                                  <  2:141899/93‑1 (MQ=255)
                                                     ccGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTa                                 >  1:3699302/1‑93 (MQ=255)
                                                       gATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAAc                               <  1:2469677/93‑1 (MQ=255)
                                                        aTACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACg                              <  1:1570453/93‑1 (MQ=255)
                                                        aTACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCAGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACg                              >  1:3307869/1‑93 (MQ=255)
                                                         tACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGa                             <  2:2252359/93‑1 (MQ=255)
                                                         tACGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGa                             <  1:1307458/93‑1 (MQ=255)
                                                          aCGGCAGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGaa                            <  1:3661972/93‑1 (MQ=255)
                                                           cGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTTATTAACGaaa                           <  2:85040/93‑1 (MQ=255)
                                                           cGGCTGCCGGTCGTGAAGACGAATGGCTCCCCATCCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGaaa                           <  1:1064091/93‑1 (MQ=255)
                                                             gCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAt                         >  2:1354626/1‑93 (MQ=255)
                                                             gCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAt                         <  1:4512399/93‑1 (MQ=255)
                                                             gCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAt                         <  2:1768497/93‑1 (MQ=255)
                                                             gCTGCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAt                         <  1:2312921/93‑1 (MQ=255)
                                                               tGCCGGTCGTGAAGACCAACGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGGTGCGGGTATTGCCTCGGGATTTATTAAGGaaaagcc                       >  2:4580925/1‑90 (MQ=255)
                                                                gCCGGTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAAtctc                      <  2:1493205/93‑1 (MQ=255)
                                                                    gTCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTg                  <  1:3911499/93‑1 (MQ=255)
                                                                     tCGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGa                 >  1:2455033/1‑93 (MQ=255)
                                                                      cGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGAt                <  1:3517665/93‑1 (MQ=255)
                                                                      cGTGAAGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGAt                >  1:207652/1‑93 (MQ=255)
                                                                           aGACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAAcc           <  1:2004360/93‑1 (MQ=255)
                                                                           aGACGAATGGCTCCCCATTCGCCCGCGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAAcc           <  2:3105313/93‑1 (MQ=255)
                                                                            gACGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCt          <  1:1665431/93‑1 (MQ=255)
                                                                             aCGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCtt         <  1:3971444/93‑1 (MQ=255)
                                                                             aCGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCtt         <  2:2929939/93‑1 (MQ=255)
                                                                              cGAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCttt        >  1:625031/1‑93 (MQ=255)
                                                                               gAATGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCtttt       <  2:2912375/93‑1 (MQ=255)
                                                                                aaTGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTtc      <  1:725545/93‑1 (MQ=255)
                                                                                aaTGGCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTtc      <  2:3332704/93‑1 (MQ=255)
                                                                                    gCTCCCCATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGa  <  2:2105023/93‑1 (MQ=255)
                                                                                          |                                                                                      
AAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCTATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGA  >  NC_000913/1656833‑1657009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑