| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,678,414 | A→G | G278G (GGA→GGG) | b1605 → | putative arginine/ornithine antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,678,414 | 0 | A | G | 98.8% | 261.2 / NA | 85 | G278G (GGA→GGG) | b1605 | putative arginine/ornithine antiporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (41/43); minor base T (0/1); total (41/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AACGCTGCTTTCGCTGGGTGTGGTGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGACCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGCAGCAGAAGTAC > NC_000913/1678324‑1678502 | aaCGCTGCTTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGcc > 1:2851819/1‑93 (MQ=255) aCGCTGCTTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCa < 1:753850/93‑1 (MQ=255) gctgctTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATg < 1:2263401/93‑1 (MQ=255) cctgctTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATg < 1:560248/92‑1 (MQ=255) ctgctTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATgg > 2:3228795/1‑93 (MQ=255) ctgctTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATgg < 2:1414576/93‑1 (MQ=255) ctgctTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATgg < 1:2305426/93‑1 (MQ=255) tgctTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATggg > 2:4226585/1‑93 (MQ=255) tgctTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATggg < 2:4390730/93‑1 (MQ=255) tgctTTCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGAAGGGGCCATggg > 2:3978269/1‑93 (MQ=255) tttCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCg > 1:404610/1‑93 (MQ=255) tCGCTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGaa < 1:1155289/93‑1 (MQ=255) cTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAatc > 2:2271774/1‑93 (MQ=255) cTGGGTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAatc > 2:3554163/1‑93 (MQ=255) gggTGTGGCGGCGCGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAatcat < 1:2944905/93‑1 (MQ=255) gggTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGCAatcat > 2:98001/1‑93 (MQ=255) gggTGTGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAatcat < 2:1338472/93‑1 (MQ=255) gtgtGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAatcatcc > 2:3276459/1‑92 (MQ=255) gtgtGGCGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAatcatca < 1:4103202/93‑1 (MQ=255) tgtgGCGGCACGTCTTGATCGGGCTGAACTTCGTTACCGGTCGATGGCCGGTCTGATGGGGGAAATGATGGGTCCATGGGGCGAAatcatcat < 2:433596/93‑1 (MQ=255) ggcggCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGc < 2:1362682/90‑1 (MQ=255) ggcggCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGc < 2:1785001/90‑1 (MQ=255) gtcACGTCCTGAACAGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGc < 1:259135/91‑1 (MQ=255) cACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCg < 1:3451289/93‑1 (MQ=255) cGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGt > 1:1130147/1‑93 (MQ=255) gTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGtt < 1:3756130/93‑1 (MQ=255) tCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGttt > 2:2555023/1‑93 (MQ=255) tCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGCGGCGAAATCATCATCGCTGCCCGttt > 2:2832277/1‑93 (MQ=255) ccTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑g < 1:1361999/93‑1 (MQ=255) cTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCTGTTT‑Ga > 2:2192595/1‑93 (MQ=255) cTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑Ga < 1:2917692/93‑1 (MQ=255) tGAACTGGGTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GAt < 1:4380358/93‑1 (MQ=255) tGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GAt > 1:3617305/1‑93 (MQ=255) gAACTGGCTGAAATTCGTATCCTGTTAATGGCCGTTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATc < 2:4645013/93‑1 (MQ=255) aaCTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCg > 2:3087477/1‑93 (MQ=255) aaCTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCg > 1:3982497/1‑93 (MQ=255) aCTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGt < 1:3970011/93‑1 (MQ=255) aCTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGt > 1:4103695/1‑93 (MQ=255) aCTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGt > 2:3515892/1‑93 (MQ=255) cTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGtt < 1:4121570/93‑1 (MQ=255) tGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGTCATGGGGCGAAATCATCATCGATGCCGGTTT‑GATCGttt > 2:2537252/1‑93 (MQ=255) ggCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTc < 2:3821267/93‑1 (MQ=255) cTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCg > 2:1324163/1‑93 (MQ=255) taaaTTCGTAACCCGTCAATGGGCGGTCTTGTTGTGGAAATTATTGGGCCATGGGGCGAAATCATCATTCCCGCCCGTTTGGATCGTTccctt < 2:1233993/92‑3 (MQ=255) aaaTTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGttt < 2:1560871/93‑1 (MQ=255) ttCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTgcg > 2:2434841/1‑93 (MQ=255) gTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTgcggcg > 1:3618694/1‑93 (MQ=255) tAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGgcgc < 1:4335842/93‑1 (MQ=255) tAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGgcgc < 2:569336/93‑1 (MQ=255) aaCCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGcgcg > 1:2936288/1‑93 (MQ=255) aaCCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGcgcg < 1:3463989/93‑1 (MQ=255) aCCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGt > 1:2699303/1‑93 (MQ=255) ccGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTAc > 1:860800/1‑93 (MQ=255) ccGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTAc > 1:2283610/1‑93 (MQ=255) ccGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTAc > 1:194883/1‑93 (MQ=255) ccGTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTAc < 1:1227555/93‑1 (MQ=255) gTCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACtt < 1:2076719/93‑1 (MQ=255) tCAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTa > 2:1863195/1‑93 (MQ=255) cAATGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTaa < 2:3541883/93‑1 (MQ=255) aaTGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAg > 1:4942/1‑93 (MQ=255) aaTGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAg > 2:2597014/1‑93 (MQ=255) aaTGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAg > 2:312634/1‑93 (MQ=255) aTGGCCTGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGc < 2:3788721/93‑1 (MQ=255) aTGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGc > 2:2465695/1‑93 (MQ=255) aTGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGc < 1:3983863/93‑1 (MQ=255) tGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCt > 1:3961621/1‑93 (MQ=255) tGGCCGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCt < 1:3283963/93‑1 (MQ=255) ccGGTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGa < 1:865170/93‑1 (MQ=255) gTCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACca > 2:2478945/1‑93 (MQ=255) tCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACcat > 2:11329/1‑93 (MQ=255) tCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACcat > 1:1361667/1‑93 (MQ=255) tCTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACcat > 1:5661/1‑93 (MQ=255) cTGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACcatc < 1:527951/93‑1 (MQ=255) tGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACcatca < 1:2065302/93‑1 (MQ=255) tGATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACcatca < 2:814418/93‑1 (MQ=255) gATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACcatcat < 2:2532991/93‑1 (MQ=255) gATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACcatcat > 2:3590009/1‑93 (MQ=255) gATGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACcatcat < 1:2665189/93‑1 (MQ=255) aTGGTGGAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATg < 1:1965851/93‑1 (MQ=255) tggtggAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGCTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATgg > 1:2412886/1‑93 (MQ=255) ggtggAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGgc < 1:754997/93‑1 (MQ=255) ggtggAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGgc > 1:4044417/1‑93 (MQ=255) gAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATTgcagca > 1:4365864/1‑93 (MQ=255) gAAATGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGgcagca > 1:198396/1‑93 (MQ=255) aaaTGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGcagcag > 1:1429708/1‑93 (MQ=255) aaTGATGGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGCAGCAGa > 1:3057598/1‑93 (MQ=255) atgatgGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGCAGCAGaa < 1:2996833/93‑1 (MQ=255) tgatgGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGCAGCAGAAg < 1:165237/93‑1 (MQ=255) tgGGGCCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGCAGCAGAAGTAc < 2:982532/93‑1 (MQ=255) | AACGCTGCTTTCGCTGGGTGTGGTGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGACCATGGGGCGAAATCATCATCGCTGCCGGTTT‑GATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGCAGCAGAAGTAC > NC_000913/1678324‑1678502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |