BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,705,521	C→T	V193V (GTC→GTT)	b1629 →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,705,521	0	C	T	100.0%	364.8 / NA	104	V193V (GTC→GTT)	b1629	putative membrane protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (48/56); total (48/56)

Only 100 of 106 total aligned reads displayed.

TAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCAT  >  NC_000913/1705431‑1705610

tAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGt                                                                                         <  2:3816119/93‑1 (MQ=255)

tAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGt                                                                                         >  2:3250542/1‑93 (MQ=255)

tAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGt                                                                                         >  1:965444/1‑93 (MQ=255)

  aGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTag                                                                                       >  1:1620063/1‑93 (MQ=255)

  aGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTag                                                                                       >  2:693729/1‑93 (MQ=255)

  aGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTag                                                                                       >  2:3059522/1‑93 (MQ=255)

   gATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTaga                                                                                      >  1:1608935/1‑93 (MQ=255)

    aTTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTagag                                                                                     >  1:3381175/1‑93 (MQ=255)

     ttGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAgg                                                                                    >  2:2508725/1‑93 (MQ=255)

      tGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAggg                                                                                   >  2:4282183/1‑93 (MQ=255)

      tGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGAGCGGCTCAGGTTGTAGAggg                                                                                   <  1:3981406/93‑1 (MQ=255)

      tGAAACGTTAATAATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAggg                                                                                   <  2:3740231/93‑1 (MQ=255)

       gAAACGTTGATTATCACCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGt                                                                                  <  2:4071038/93‑1 (MQ=255)

       gAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGt                                                                                  >  2:4185970/1‑93 (MQ=255)

       gAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGt                                                                                  >  1:3011868/1‑93 (MQ=255)

        aaaCGTTGATTATCACCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTa                                                                                 <  2:2087642/93‑1 (MQ=255)

          aCGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTAtt                                                                               >  2:4617063/1‑93 (MQ=255)

          aCGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTAtt                                                                               >  2:4254931/1‑93 (MQ=255)

            gTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCg                                                                             >  1:2538532/1‑93 (MQ=255)

              tGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCa                                                                           <  2:609477/93‑1 (MQ=255)

               gATTATCACCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAt                                                                          <  1:4227040/93‑1 (MQ=255)

               gATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAt                                                                          >  1:2620165/1‑93 (MQ=255)

                aTTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAtt                                                                         >  2:4101803/1‑93 (MQ=255)

                aTTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAtt                                                                         >  2:4221096/1‑93 (MQ=255)

                aTTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCAtt                                                                         <  1:4009434/93‑1 (MQ=255)

                  tATCACCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCt                                                                       <  1:106553/93‑1 (MQ=255)

                  tATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCt                                                                       <  1:23957/93‑1 (MQ=255)

                   aTCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCtt                                                                      <  1:3027387/93‑1 (MQ=255)

                    tCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTg                                                                     >  2:2832108/1‑93 (MQ=255)

                    tCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTg                                                                     <  2:432023/93‑1 (MQ=255)

                    tCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTg                                                                     >  1:1902060/1‑93 (MQ=255)

                    tCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTg                                                                     >  2:2203634/1‑93 (MQ=255)

                     cAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTgc                                                                    <  2:2373836/93‑1 (MQ=255)

                     cAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGGATTCGCATTCTTgc                                                                    >  2:2391395/1‑93 (MQ=255)

                      aaCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTgcg                                                                   <  1:1299898/93‑1 (MQ=255)

                       aCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTgcgc                                                                  >  1:3884220/1‑93 (MQ=255)

                       aCGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTgcgc                                                                  <  2:798161/93‑1 (MQ=255)

                         gcgGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGGATTCGCATTCTTGCGCat                                                                >  2:3157080/1‑93 (MQ=255)

                          cgGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCata                                                               <  2:1566724/93‑1 (MQ=255)

                            gCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATAtt                                                             <  2:1429786/93‑1 (MQ=255)

                             cTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTc                                                            <  2:2071190/93‑1 (MQ=255)

                             cTGAGGGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTc                                                            <  2:577199/93‑1 (MQ=255)

                              tGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGGATTCGCATTCTTGCGCATATTCt                                                           >  2:1968953/1‑93 (MQ=255)

                               gAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTg                                                          >  1:362552/1‑93 (MQ=255)

                                aGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGc                                                         >  2:1631521/1‑93 (MQ=255)

                                 gTGCGATCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCGCAGGTTGTAGAGGGTATTCGCATCCTTGCGCATATTCTGCa                                                        <  2:1777397/93‑1 (MQ=255)

                                  tGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAg                                                       <  1:1665857/93‑1 (MQ=255)

                                      aGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGCATTCGCATTCTTGCGCATATTCTGCAGCCAc                                                   >  2:3036453/1‑93 (MQ=255)

                                       gCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcg                                                  >  1:4078530/1‑93 (MQ=255)

                                       gCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCAcg                                                  >  1:3499569/1‑93 (MQ=255)

                                          gTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGa                                               >  2:4538040/1‑93 (MQ=255)

                                            aCATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGaaa                                             <  2:2112535/93‑1 (MQ=255)

                                             cATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAAt                                            >  1:3145205/1‑93 (MQ=255)

                                             cATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCACATATTCTGCAGCCACGCGAAAt                                            >  1:3047658/1‑93 (MQ=255)

                                              aTTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAAtt                                           <  2:2566257/93‑1 (MQ=255)

                                              aTTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAAtt                                           <  1:3213579/93‑1 (MQ=255)

                                                tACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCATGCGAAATTCt                                         >  2:1767945/1‑93 (MQ=255)

                                                 aCCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCtt                                        <  2:2917379/93‑1 (MQ=255)

                                                 aCCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCtt                                        <  2:808349/93‑1 (MQ=255)

                                                  ccgccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGACATTCTTa                                       <  2:3805112/93‑1 (MQ=255)

                                                  ccgccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTa                                       <  1:2207861/93‑1 (MQ=255)

                                                   cgccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTAt                                      >  1:787565/1‑93 (MQ=255)

                                                    gccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATc                                     <  1:4357246/93‑1 (MQ=255)

                                                    gccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATc                                     <  1:3433565/93‑1 (MQ=255)

                                                    gccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGAGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATc                                     <  1:201513/93‑1 (MQ=255)

                                                     ccgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCg                                    >  1:4659179/1‑93 (MQ=255)

                                                      cgATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCgg                                   <  2:1801176/93‑1 (MQ=255)

                                                       gATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGc                                  <  1:126034/93‑1 (MQ=255)

                                                       gATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGc                                  >  2:442745/1‑93 (MQ=255)

                                                       gATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGc                                  >  1:4213423/1‑93 (MQ=255)

                                                        aTGACCGTTTGATGCAGGATTGTGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCa                                 <  2:4312258/93‑1 (MQ=255)

                                                        aTGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGct                                 >  1:2112149/1‑92 (MQ=255)

                                                         tGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCAt                                <  2:1500888/93‑1 (MQ=255)

                                                         tGACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGCATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCAt                                >  2:2793489/1‑93 (MQ=255)

                                                          gACCGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCAtt                               >  1:1997828/1‑93 (MQ=255)

                                                            ccGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGa                             <  2:2930357/93‑1 (MQ=255)

                                                             cGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGaa                            <  1:2976104/93‑1 (MQ=255)

                                                             cGTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGaa                            <  1:984549/93‑1 (MQ=255)

                                                              gTTTGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAg                           >  1:1517501/1‑93 (MQ=255)

                                                               tttGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGa                          <  1:451409/93‑1 (MQ=255)

                                                               tttGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGa                          <  2:4198997/93‑1 (MQ=255)

                                                                 tGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATa                        <  1:3105219/93‑1 (MQ=255)

                                                                 tGATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATa                        <  1:4089320/93‑1 (MQ=255)

                                                                  gATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATaa                       >  1:4487060/1‑93 (MQ=255)

                                                                  gATGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATaa                       <  1:3047048/93‑1 (MQ=255)

                                                                   aTGCAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAAc                      <  1:4130163/93‑1 (MQ=255)

                                                                      cAGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACaaa                   <  2:2692108/93‑1 (MQ=255)

                                                                       aGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAc                  <  1:3170148/93‑1 (MQ=255)

                                                                       aGGATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAc                  <  2:2449128/93‑1 (MQ=255)

                                                                        ggATTGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAAcc                 <  2:1331553/93‑1 (MQ=255)

                                                                           ttGCGCGGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCa              <  1:2878109/93‑1 (MQ=255)

                                                                             gcgcGGCTGAGGTTGTAGAGGGTATTCGCATTCTTGCTCATATTCTACAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAgg            <  1:2193262/93‑1 (MQ=255)

                                                                               gcgGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCg          >  2:651236/1‑93 (MQ=255)

                                                                                cgGCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGa         >  1:4513562/1‑93 (MQ=255)

                                                                                 ggCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGAt        <  1:2945002/93‑1 (MQ=255)

                                                                                  gCTCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGAtt       >  1:3069810/1‑93 (MQ=255)

                                                                                    tCAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTc     >  2:3777047/1‑93 (MQ=255)

                                                                                     cAGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTcc    <  1:2905693/93‑1 (MQ=255)

                                                                                      aGGTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCa   >  2:187648/1‑93 (MQ=255)

                                                                                       ggTTGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCAt  >  1:1735016/1‑93 (MQ=255)

TAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCAT  >  NC_000913/1705431‑1705610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`