BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,707,432	T→C	I89I (ATT→ATC)	ydgO →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,707,432	0	T	C	98.9%	284.1 / ‑4.5	94	I89I (ATT→ATC)	ydgO	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (53/39); total (54/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.41e-01

Only 100 of 104 total aligned reads displayed.

TCTCGTACTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATTCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTGGGACAAAA  >  NC_000913/1707342‑1707521

tctcGTACTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATccc                                                                                         >  1:599966/1‑93 (MQ=255)

cctcGTACTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATccc                                                                                         <  2:2576690/92‑1 (MQ=255)

     tACTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATcccccccc                                                                                    >  1:4501176/1‑93 (MQ=255)

     tACTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATcccccccc                                                                                    >  2:4529904/1‑93 (MQ=255)

     tACTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATcccccccc                                                                                    >  2:2319321/1‑93 (MQ=255)

       cTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTc                                                                                  >  2:466608/1‑93 (MQ=255)

       cTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTc                                                                                  <  1:3424858/93‑1 (MQ=255)

        tCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTcg                                                                                 >  1:1941674/1‑93 (MQ=255)

          aaaCTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTcgcg                                                                               >  1:840206/1‑93 (MQ=255)

          aaaCTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTcgcg                                                                               >  1:2726639/1‑93 (MQ=255)

            aCTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGcc                                                                             >  1:2481056/1‑93 (MQ=255)

            aCTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGcc                                                                             >  1:489690/1‑93 (MQ=255)

              tACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCAt                                                                           >  1:3492732/1‑93 (MQ=255)

               aCGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCAtg                                                                          >  1:1759169/1‑93 (MQ=255)

                 gCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCAtggt                                                                        <  1:976079/93‑1 (MQ=255)

                    aGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGa                                                                     >  2:2761961/1‑93 (MQ=255)

                    aGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGa                                                                     >  1:3772676/1‑93 (MQ=255)

                     gCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGAt                                                                    <  1:1743558/93‑1 (MQ=255)

                      cAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATACCCCCCCTCGCGCCATGGTGGATg                                                                   <  1:72525/93‑1 (MQ=255)

                       aGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATgg                                                                  <  1:1654657/93‑1 (MQ=255)

                       aGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATgg                                                                  >  2:1266475/1‑93 (MQ=255)

                        gTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGt                                                                 <  1:1183177/93‑1 (MQ=255)

                        gTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGCGGATGGt                                                                 >  2:1458342/1‑93 (MQ=255)

                           ggTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCgg                                                              >  2:2620991/1‑92 (MQ=255)

                            gTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTg                                                             <  2:4370373/93‑1 (MQ=255)

                            gTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTg                                                             <  1:203176/93‑1 (MQ=255)

                              acccGCAACGTTGAAAGATAACTCAGCATT‑CTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTg                                                          <  2:653379/91‑1 (MQ=255)

                              aGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCt                                                           <  2:2293976/93‑1 (MQ=255)

                                ccGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTgg                                                         >  2:3046440/1‑93 (MQ=255)

                                  gCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGt                                                       >  2:651574/1‑93 (MQ=255)

                                  gCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGt                                                       >  2:1319464/1‑93 (MQ=255)

                                   cAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTa                                                      >  2:2004241/1‑93 (MQ=255)

                                    aaCGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTag                                                     >  1:1935358/1‑92 (MQ=255)

                                    aaCGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTAc                                                     >  2:712331/1‑93 (MQ=255)

                                    aaCGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTAc                                                     >  2:2922061/1‑93 (MQ=255)

                                    aaCGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTAc                                                     <  1:3874437/93‑1 (MQ=255)

                                     aCGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACg                                                    >  1:3319374/1‑93 (MQ=255)

                                      cGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACgg                                                   <  2:1317479/93‑1 (MQ=255)

                                       gTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGgt                                                  >  1:2884102/1‑93 (MQ=255)

                                       gTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGgt                                                  <  2:4383173/93‑1 (MQ=255)

                                        ttGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGgtg                                                 >  1:2970439/1‑93 (MQ=255)

                                        ttGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTA‑TCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGgtgt                                                >  2:4291785/1‑93 (MQ=255)

                                         tGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGgtgt                                                <  2:3872594/93‑1 (MQ=255)

                                          gAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGtt                                               <  2:1843067/93‑1 (MQ=255)

                                          gAAAGATAACTCAGCATTGCTGACAGGCTTATGGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGtt                                               <  2:2123197/93‑1 (MQ=255)

                                           aaaGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGttt                                              <  2:400459/93‑1 (MQ=255)

                                            aaGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCCTGGTGGATGGTCGTGCTGGGTGCGGTGTTTg                                             >  2:3994954/1‑93 (MQ=255)

                                            aaGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTg                                             <  2:3738121/93‑1 (MQ=255)

                                             aGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGc                                            <  2:4500060/93‑1 (MQ=255)

                                              gATAACTTAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCg                                           >  2:2110861/1‑93 (MQ=255)

                                              gATAACTCAGCATTGCTGACAGGGTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGAACGGTGTTTGCg                                           >  2:3936713/1‑93 (MQ=255)

                                              gATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGTTGGATGGTCGTGCTGGGTACGGTGTTTGCg                                           >  1:2021822/1‑93 (MQ=255)

                                              gATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCg                                           >  1:2354829/1‑93 (MQ=255)

                                              gATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGGGGATGGTCGTGCTGGGTACGGTGTTTGCg                                           >  1:405465/1‑93 (MQ=255)

                                              aaTAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCg                                           <  2:3216767/92‑1 (MQ=255)

                                               aTAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGCTGGTCGTGCTGGGGACGGTGTTTGCgg                                          >  2:1881498/1‑93 (MQ=255)

                                               aTAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCgg                                          >  1:3794968/1‑93 (MQ=255)

                                                tAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGt                                         >  1:727458/1‑93 (MQ=255)

                                                   cTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGat                                      <  1:3488738/93‑1 (MQ=255)

                                                   cTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGat                                      <  1:1472283/93‑1 (MQ=255)

                                                    tCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGatc                                     >  2:1407102/1‑93 (MQ=255)

                                                     cAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGatca                                    <  1:4383103/93‑1 (MQ=255)

                                                     cAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGatca                                    <  1:167247/93‑1 (MQ=255)

                                                      aGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGatcat                                   <  2:2114029/93‑1 (MQ=255)

                                                      aGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGatcat                                   <  1:4434992/93‑1 (MQ=255)

                                                          ttGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGGCATGGTGGGTGGGCGGGCTGGGGACCGGGGTTGCCGTGATTATCggt                               >  2:2555869/1‑91 (MQ=255)

                                                          ttGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCt                               >  1:536225/1‑93 (MQ=255)

                                                          ttGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCt                               >  1:1289333/1‑93 (MQ=255)

                                                          ttGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCt                               >  2:546382/1‑93 (MQ=255)

                                                          ttGCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCt                               >  2:4093365/1‑93 (MQ=255)

                                                            gCTGACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTaa                             >  1:4124484/1‑93 (MQ=255)

                                                             cTGACAGGCTTATTGCTGGCGGTAAGTACCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTaaa                            <  2:4614610/93‑1 (MQ=255)

                                                               gACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGGTCATCGCTAAACa                          <  2:2597984/93‑1 (MQ=255)

                                                               gACAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACa                          >  1:672323/1‑93 (MQ=255)

                                                                aCAGGCTTATTGCTGGCGGTAAGTCTCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAg                         <  1:827541/93‑1 (MQ=255)

                                                                aCAGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAg                         <  2:3558924/93‑1 (MQ=255)

                                                                aCAGGCTCATTGCTGGCGATAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTGCGCGGTTTTCACCGCTAAAcgg                         <  2:2292170/93‑3 (MQ=255)

                                                                  aGGCTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGGACGGTGTTTGCGGTGATCATCGCTAAACAGtt                       >  2:4066060/1‑93 (MQ=255)

                                                                  aGGCTTATTGCTGGCGGTAAGTACCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGtt                       <  1:149240/93‑1 (MQ=255)

                                                                     cTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCCTGGTGGATGGTCGTGCTGGGGACGGGGTTTGCGGTGATCATCGCTAAACAGTTGTa                    >  1:4005369/1‑93 (MQ=255)

                                                                     cTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTa                    >  2:2844419/1‑93 (MQ=255)

                                                                     cTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTa                    <  2:4349419/93‑1 (MQ=255)

                                                                     cTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTa                    <  1:2302832/93‑1 (MQ=255)

                                                                     cTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTa                    <  1:1467891/93‑1 (MQ=255)

                                                                     cTTATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTa                    <  2:212544/93‑1 (MQ=255)

                                                                     cTTAGTGCTGGCGGGAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGGTCATCGCTAATCAGTTGTa                    <  2:4586316/93‑1 (MQ=255)

                                                                      ttATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGGGGATGGTCGTGCTTGGGGCGGAGTTTGCGGTGATTATCGCTGAAAAGATGTAt                   >  2:4001690/1‑93 (MQ=255)

                                                                       tATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATg                  <  2:1135713/93‑1 (MQ=255)

                                                                       tATTGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATg                  >  1:4361550/1‑93 (MQ=255)

                                                                         ttGCTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGGGTTTTCGGTGATCATCGCTAAACAGTTGTATGGc                >  2:2250949/1‑93 (MQ=255)

                                                                            cTGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGt             >  1:4378421/1‑93 (MQ=255)

                                                                             tGGCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTc            <  2:2562010/93‑1 (MQ=255)

                                                                              ggCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCt           <  1:1922998/93‑1 (MQ=255)

                                                                              ggCGGTAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCt           >  1:1152434/1‑93 (MQ=255)

                                                                                cGGTAAGTCTCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTgg         <  1:3631318/93‑1 (MQ=255)

                                                                                   tAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTGGGAc      >  1:4294260/1‑93 (MQ=255)

                                                                                   tAAGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTGGGAc      >  1:4270619/1‑93 (MQ=255)

                                                                                     aGTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTGGGACaa    >  1:563511/1‑93 (MQ=255)

                                                                                      gTATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTGGGACaaa   <  2:1159895/93‑1 (MQ=255)

                                                                                       tATCCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTGGGACaaaa  <  2:1176648/93‑1 (MQ=255)

TCTCGTACTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATTCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTGGGACAAAA  >  NC_000913/1707342‑1707521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`