BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	10,409	A→G	V29A (GTG→GCG)	yaaH ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	10,409	0	A	G	100.0%	594.1 / NA	188	V29A (GTG→GCG)	yaaH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (80/108); total (80/108)

Only 100 of 195 total aligned reads displayed.

TTGTACTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCACGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATAATT  >  NC_000913/10319‑10498

 tGTACTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGt                                                                                        <  1:2717164/93‑1 (MQ=255)

 tGTACTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGt                                                                                        <  2:3231966/93‑1 (MQ=255)

  gTACTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGtt                                                                                       <  1:4524190/93‑1 (MQ=255)

  gTACTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGtt                                                                                       >  1:3588561/1‑93 (MQ=255)

  gTACTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGtt                                                                                       <  2:1985071/93‑1 (MQ=255)

  gTACTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGtt                                                                                       <  1:259722/93‑1 (MQ=255)

   tACTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTtg                                                                                      <  1:1596871/93‑1 (MQ=255)

   tACTCCAGCAGACCAGCAAAAATGTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTtg                                                                                      <  1:2585663/93‑1 (MQ=255)

    aCTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTtgt                                                                                     <  2:165917/93‑1 (MQ=255)

    aCTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTtgt                                                                                     >  2:980787/1‑93 (MQ=255)

      tCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGc                                                                                   >  1:830702/1‑93 (MQ=255)

       ccAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGTGAAATAACCCGCGTTGTGCa                                                                                  <  2:3623212/93‑1 (MQ=255)

       ccAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCa                                                                                  <  2:1297071/93‑1 (MQ=255)

       ccAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCa                                                                                  <  1:3223506/93‑1 (MQ=255)

         agcagACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAgg                                                                                >  1:4182856/1‑93 (MQ=255)

          gcagACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGt                                                                               >  2:4149021/1‑93 (MQ=255)

          gcagACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGt                                                                               <  2:737262/93‑1 (MQ=255)

          gcagACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGt                                                                               >  1:1923896/1‑93 (MQ=255)

           cagACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGtt                                                                              <  2:4506152/93‑1 (MQ=255)

             gACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTaa                                                                            >  2:2702821/1‑93 (MQ=255)

              aCCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTCAg                                                                           >  1:77434/1‑93 (MQ=255)

                cAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCa                                                                         <  2:2821554/93‑1 (MQ=255)

                cAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCa                                                                         <  1:3517891/93‑1 (MQ=255)

                   gaaaaaTTTGCGGGAGGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGaa                                                                      <  2:1474092/92‑1 (MQ=255)

                     aaaaTTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAAtg                                                                    >  1:3834281/1‑93 (MQ=255)

                       aaTTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAAtggg                                                                  >  2:870986/1‑92 (MQ=255)

                        aTTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAAtggtg                                                                 <  2:1233538/93‑1 (MQ=255)

                        aTTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAAtggtg                                                                 <  1:1994656/93‑1 (MQ=255)

                        aTTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAAtggtg                                                                 >  1:3438543/1‑93 (MQ=255)

                         tttGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAAtggtgg                                                                >  2:4410671/1‑93 (MQ=255)

                            gcgcGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCa                                                             <  1:3422324/93‑1 (MQ=255)

                             cgcgATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCAt                                                            <  1:558092/93‑1 (MQ=255)

                              gcgATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATg                                                           <  1:4407422/93‑1 (MQ=255)

                               cgATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGc                                                          >  1:866913/1‑93 (MQ=255)

                                gATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGcc                                                         >  1:3098040/1‑93 (MQ=255)

                                   tccgccgTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGaa                                                      <  2:2155961/92‑1 (MQ=255)

                                   gccgccGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGaa                                                      <  2:2904683/93‑1 (MQ=255)

                                    ccgccgTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAg                                                     >  1:1184722/1‑93 (MQ=255)

                                      gccgTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGcc                                                   <  1:3993653/93‑1 (MQ=255)

                                      gccgTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGcc                                                   <  2:2263587/93‑1 (MQ=255)

                                      gccgTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGcc                                                   <  1:517822/93‑1 (MQ=255)

                                        cgTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCa                                                 >  2:1375155/1‑93 (MQ=255)

                                        cgTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCa                                                 <  1:925667/93‑1 (MQ=255)

                                         gTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCAt                                                <  1:1756770/93‑1 (MQ=255)

                                          tAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATc                                               <  2:1680852/93‑1 (MQ=255)

                                          tAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATc                                               <  1:3468586/93‑1 (MQ=255)

                                           aGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCa                                              <  1:1422422/93‑1 (MQ=255)

                                           aGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCa                                              <  1:4163122/93‑1 (MQ=255)

                                            gAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAg                                             >  2:3745406/1‑93 (MQ=255)

                                            gAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAg                                             >  1:3552650/1‑93 (MQ=255)

                                             aaaaTGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAgg                                            <  2:422095/93‑1 (MQ=255)

                                             aaaaTGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAgg                                            <  2:1208000/93‑1 (MQ=255)

                                               aaTGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTCAGCAGAATGGTGGTCATGCCGAAACCCATCAAGcc                                          >  2:1568636/1‑93 (MQ=255)

                                               aaTGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGcc                                          <  2:2563560/93‑1 (MQ=255)

                                               aaTGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGcc                                          <  2:1602302/93‑1 (MQ=255)

                                               aaTGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGcc                                          <  2:12758/93‑1 (MQ=255)

                                                aTGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGccc                                         >  2:3799223/1‑93 (MQ=255)

                                                 tGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCa                                        >  1:4594296/1‑93 (MQ=255)

                                                   cccATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGc                                      <  2:755684/93‑1 (MQ=255)

                                                    ccATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCg                                     >  1:258403/1‑93 (MQ=255)

                                                      aTGGCAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGt                                   >  2:4062609/1‑93 (MQ=255)

                                                         gCAAGAATAAGACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGcc                                <  1:989999/93‑1 (MQ=255)

                                                          cAAGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCg                               <  2:3414027/93‑1 (MQ=255)

                                                           aaGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCgg                              >  1:2379763/1‑93 (MQ=255)

                                                           aaGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCgg                              >  2:1153075/1‑93 (MQ=255)

                                                            aGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGa                             >  1:1856409/1‑93 (MQ=255)

                                                            aGAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGa                             <  1:1500410/93‑1 (MQ=255)

                                                             gAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGAt                            >  1:2238850/1‑93 (MQ=255)

                                                             gAATAATACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGAt                            >  2:2686969/1‑93 (MQ=255)

                                                              aataatACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGAtt                           <  1:3370813/93‑1 (MQ=255)

                                                              aataatACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGAtt                           >  1:1676078/1‑93 (MQ=255)

                                                              aataatACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGAtt                           >  2:3290826/1‑93 (MQ=255)

                                                              aataatACCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGAtt                           <  2:143470/93‑1 (MQ=255)

                                                               ataataCCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTa                          <  1:2067508/93‑1 (MQ=255)

                                                                taataCCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAg                         >  1:1546134/1‑93 (MQ=255)

                                                                 aataCCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGc                        >  1:2192195/1‑93 (MQ=255)

                                                                   taCCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCa                      <  1:4494666/93‑1 (MQ=255)

                                                                    aCCGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCaa                     >  1:693724/1‑93 (MQ=255)

                                                                     ccGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAAc                    <  1:1582073/93‑1 (MQ=255)

                                                                      cGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACt                   <  2:670202/93‑1 (MQ=255)

                                                                      cGTCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACt                   <  1:3912927/93‑1 (MQ=255)

                                                                        tCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTa                 <  2:2505304/93‑1 (MQ=255)

                                                                        tCCAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTa                 <  2:4131701/93‑1 (MQ=255)

                                                                         ccAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAg                <  2:3352726/93‑1 (MQ=255)

                                                                         ccAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAg                <  2:1011139/93‑1 (MQ=255)

                                                                          cAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAgt               <  2:2483337/93‑1 (MQ=255)

                                                                          cAGAGCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAgt               <  1:2408009/93‑1 (MQ=255)

                                                                            gagCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGTCCCAGCGGTGCCGGATTAGCCAACTTAgtgt             <  2:347228/93‑1 (MQ=255)

                                                                             agCGAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGtt            <  1:446813/93‑1 (MQ=255)

                                                                                gAAATATCCCGCGTGTGGCAGTTTAAGCAGAATGGAGGCCATCCCAAGGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGcc         <  2:2227208/93‑1 (MQ=255)

                                                                                gAAATAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGcc         >  1:3954023/1‑93 (MQ=255)

                                                                                  aaTAGCCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCa       <  2:50022/93‑1 (MQ=255)

                                                                                  aaTAACCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCa       <  2:17737/93‑1 (MQ=255)

                                                                                     aaCCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATaa    <  1:327684/93‑1 (MQ=255)

                                                                                     aaCCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATaa    <  2:3879431/93‑1 (MQ=255)

                                                                                     aaCCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATaa    <  1:2874320/93‑1 (MQ=255)

                                                                                      aCCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATAAt   <  2:1519661/93‑1 (MQ=255)

                                                                                      aCCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATAAt   <  1:4103092/93‑1 (MQ=255)

                                                                                      aCCCGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATAAt   >  2:2081796/1‑93 (MQ=255)

                                                                                       cccGCGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATAAtt  <  1:2907358/93‑1 (MQ=255)

TTGTACTCCAGCAGACCAGCAAAAATTTGCGCGATGCCGCCGTAGAAAATGCCCATGGCAAGAATAATACCGTCCAGAGCGAAATAACCCACGTTGTGCAGGTTAAGCAGAATGGTGGTCATGCCGAAGCCCATCAGGCCCAGCGGTGCCGGATTAGCCAACTTAGTGTTGCCCATAATT  >  NC_000913/10319‑10498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`