BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	160,649	A→G	intergenic (‑45/+133)	dksA ← / ← sfsA	DksA/putative regulator for maltose metabolism

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	160,649	0	A	G	100.0%	542.7 / NA	173	intergenic (‑45/+133)	dksA/sfsA	DksA/putative regulator for maltose metabolism
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (75/98); total (75/98)

Only 100 of 182 total aligned reads displayed.

AGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGCGTATT  >  NC_000913/160561‑160738

agaATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGgaaaa                                                                                       <  2:2751677/93‑1 (MQ=255)

agaATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGgaaaa                                                                                       <  1:3114950/93‑1 (MQ=255)

   aTACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGa                                                                                    >  2:2918869/1‑93 (MQ=255)

   aTACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGa                                                                                    <  2:2565666/93‑1 (MQ=255)

    tACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAg                                                                                   >  1:4294876/1‑93 (MQ=255)

    tACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAg                                                                                   >  2:4493677/1‑93 (MQ=255)

    tACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAg                                                                                   >  1:1650306/1‑93 (MQ=255)

      cTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGc                                                                                 <  1:625091/93‑1 (MQ=255)

         aGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGTGGAAAATGAGGCCGc                                                                              <  1:1510294/93‑1 (MQ=255)

          gggACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCt                                                                             <  1:3857935/93‑1 (MQ=255)

           ggACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCta                                                                            <  1:2443622/93‑1 (MQ=255)

           ggACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCta                                                                            <  2:2632931/93‑1 (MQ=255)

           ggACGATGTTTTACGGTTGTGCCTTTCTTGCATGTTTCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCta                                                                            <  1:3829637/93‑1 (MQ=255)

             aCGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCtata                                                                          >  2:3876592/1‑93 (MQ=255)

               gATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATaaa                                                                        <  1:4084717/93‑1 (MQ=255)

               gATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATaaa                                                                        <  2:834108/93‑1 (MQ=255)

                aTGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGCAAATGAGGCCGCTATaaaa                                                                       >  2:2999414/1‑92 (MQ=255)

                aTGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAAt                                                                       <  2:3737906/93‑1 (MQ=255)

                aTGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAAt                                                                       >  2:1675575/1‑93 (MQ=255)

                aTGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAAt                                                                       <  2:4372754/93‑1 (MQ=255)

                aTGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAAt                                                                       >  2:859016/1‑93 (MQ=255)

                 tGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATa                                                                      <  1:22648/93‑1 (MQ=255)

                  gTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAg                                                                     >  2:4192444/1‑93 (MQ=255)

                   ttttACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGc                                                                    <  2:542262/93‑1 (MQ=255)

                    tttACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCa                                                                   <  2:2050817/93‑1 (MQ=255)

                     ttACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAg                                                                  <  1:3915806/93‑1 (MQ=255)

                     ttACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAg                                                                  >  2:599805/1‑93 (MQ=255)

                      tACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGa                                                                 <  2:2462521/93‑1 (MQ=255)

                       aCGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGAt                                                                <  1:1034657/93‑1 (MQ=255)

                       aCGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGAt                                                                <  1:347690/93‑1 (MQ=255)

                       aCGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGAt                                                                >  1:1789763/1‑93 (MQ=255)

                         ggTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGc                                                              <  2:3443608/93‑1 (MQ=255)

                          gTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCt                                                             >  1:1737144/1‑93 (MQ=255)

                          gTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCt                                                             <  1:3993368/93‑1 (MQ=255)

                          gTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCt                                                             >  1:4543749/1‑93 (MQ=255)

                           ttttGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCtt                                                            >  1:590590/1‑93 (MQ=255)

                            tttGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCttt                                                           <  2:3823549/93‑1 (MQ=255)

                            tttGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCttt                                                           <  2:4625562/93‑1 (MQ=255)

                            tttGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCttt                                                           <  1:2684829/93‑1 (MQ=255)

                            tttGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGCCCGCTATAAATAGCAGATGCttt                                                           <  2:3780866/93‑1 (MQ=255)

                              tGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTc                                                         <  1:2201880/93‑1 (MQ=255)

                               gCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTcc                                                        <  2:1178136/93‑1 (MQ=255)

                                cccTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCg                                                       <  2:4063015/93‑1 (MQ=255)

                                cccTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCg                                                       >  1:4266199/1‑93 (MQ=255)

                                cccTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCg                                                       >  2:2430597/1‑93 (MQ=255)

                                 ccTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCgg                                                      >  1:2655754/1‑93 (MQ=255)

                                   ttcttGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGAt                                                    >  2:3724321/1‑93 (MQ=255)

                                   ttcttGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGAt                                                    >  2:2080325/1‑93 (MQ=255)

                                    tcttGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATa                                                   <  1:980526/93‑1 (MQ=255)

                                    tcttGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATa                                                   <  1:2752170/93‑1 (MQ=255)

                                     cttGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAg                                                  >  1:1019658/1‑93 (MQ=255)

                                       tGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCa                                                >  1:2044527/1‑93 (MQ=255)

                                       tGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCa                                                <  2:4261625/93‑1 (MQ=255)

                                        gCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCATATGCTTTTCCGGATAGCaa                                               <  2:4552866/93‑1 (MQ=255)

                                        gCATGTTGCTGCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCaa                                               <  2:180869/93‑1 (MQ=255)

                                          aTGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAAtt                                             >  1:2969078/1‑93 (MQ=255)

                                          aTGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAAtt                                             >  2:3268484/1‑93 (MQ=255)

                                           tGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTa                                            <  1:4580316/93‑1 (MQ=255)

                                            gTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTAt                                           >  2:125072/1‑93 (MQ=255)

                                             ttGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATc                                          <  1:3524330/93‑1 (MQ=255)

                                             ttGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATc                                          >  1:4205578/1‑93 (MQ=255)

                                             ttGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATc                                          <  2:1970932/93‑1 (MQ=255)

                                                cTTCTCCTTAAAACGCACTCTCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTaa                                       >  1:3287739/1‑93 (MQ=255)

                                                 ttCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTaaa                                      <  2:3517595/93‑1 (MQ=255)

                                                 ttCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTaaa                                      <  2:4660868/93‑1 (MQ=255)

                                                 ttCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTaaa                                      <  2:2526507/93‑1 (MQ=255)

                                                 ttCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTaaa                                      >  2:3039390/1‑93 (MQ=255)

                                                     ccTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTa                                  >  2:2851375/1‑93 (MQ=255)

                                                     ccTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTa                                  <  1:3174931/93‑1 (MQ=255)

                                                      cTTAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTaa                                 >  2:3934943/1‑93 (MQ=255)

                                                       ttAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAac                                >  1:1177131/1‑93 (MQ=255)

                                                       ttAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAac                                >  2:2909921/1‑93 (MQ=255)

                                                       ttAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAac                                <  2:71529/93‑1 (MQ=255)

                                                        tAACACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAaca                               <  2:2027374/93‑1 (MQ=255)

                                                         aaCACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAacac                              >  1:3387007/1‑93 (MQ=255)

                                                         aaCACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAacac                              >  1:3891924/1‑93 (MQ=255)

                                                         aaCACGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAacac                              >  1:952625/1‑93 (MQ=255)

                                                          acacGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACt                             >  2:140635/1‑93 (MQ=255)

                                                           cacGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACtt                            <  2:627108/93‑1 (MQ=255)

                                                           cacGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACtt                            >  1:2782591/1‑93 (MQ=255)

                                                            acGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTg                           <  2:2184898/93‑1 (MQ=255)

                                                            acGCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTg                           <  1:4434652/93‑1 (MQ=255)

                                                             cggaCTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGa                          <  2:1639343/90‑1 (MQ=255)

                                                              gCACTATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGAc                         <  1:4309142/93‑1 (MQ=255)

                                                                  tATCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACt                     >  1:1982367/1‑93 (MQ=255)

                                                                   aTCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtg                    <  1:912262/93‑1 (MQ=255)

                                                                   aTCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtg                    <  1:1717711/93‑1 (MQ=255)

                                                                    tCGATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgt                   >  2:4120363/1‑93 (MQ=255)

                                                                    tCGATCACCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgt                   <  2:674901/93‑1 (MQ=255)

                                                                     cGATCCCCATGTGCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgtg                  <  2:3457447/93‑1 (MQ=255)

                                                                      gATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgtgt                 <  2:3185329/93‑1 (MQ=255)

                                                                      gATCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgtgt                 >  1:2092923/1‑93 (MQ=255)

                                                                       aTCCCCATGTTCGGGGGGAAAGTGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACtgtgtg                >  2:529779/1‑93 (MQ=255)

                                                                        tCCCCATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGa               >  1:2601250/1‑93 (MQ=255)

                                                                         ccccATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAg              >  2:4532994/1‑93 (MQ=255)

                                                                            cATGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGaa           >  1:3227117/1‑93 (MQ=255)

                                                                             aTGTTCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGaaa          >  2:1959604/1‑93 (MQ=255)

                                                                                ttCGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGc       <  2:3666091/93‑1 (MQ=255)

                                                                                  cGGGGGGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGCGt     >  2:1644904/1‑93 (MQ=255)

                                                                                    ggggGAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACCACTGTGTGAGGAACAGAGTAt   >  1:682269/1‑93 (MQ=255)

AGAATACTCAGGGACGATGTTTTACGGTTTTGCCCTTCTTGCATGTTGCTTCTCCTTAACACGCACTATCGATCCCCATGTTCGGGGGAAAAATGAGGCCGCTATAAATAGCAGATGCTTTTCCGGATAGCAATTATCTAAACGTAACACTTGACAACTGTGTGAGGAAAAGCGTATT  >  NC_000913/160561‑160738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`