BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,712,211	A→G	V473V (GTA→GTG)	ydgR →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,712,211	0	A	G	99.0%	312.7 / ‑4.4	101	V473V (GTA→GTG)	ydgR	putative transport protein
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (56/44); total (56/45)
Fisher's exact test for biased strand distribution p-value = 4.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.31e-01

Only 100 of 103 total aligned reads displayed.

CGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTC  >  NC_000913/1712123‑1712300

cGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGa                                                                                       <  2:832316/93‑1 (MQ=255)

cGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGa                                                                                       <  1:271743/93‑1 (MQ=255)

 ggATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGAt                                                                                      >  2:2777030/1‑93 (MQ=255)

 ggATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGAt                                                                                      <  2:4078038/93‑1 (MQ=255)

 ggATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGAt                                                                                      <  2:3304266/93‑1 (MQ=255)

  gATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGAtg                                                                                     >  1:2941830/1‑93 (MQ=255)

     aaCGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGAtgctg                                                                                  >  2:1668136/1‑93 (MQ=255)

      aCGTTCCCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGAtgctgc                                                                                 <  2:1684221/93‑1 (MQ=255)

      aCGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGAtgctgc                                                                                 >  2:285442/1‑93 (MQ=255)

      aCGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTAATTGCAGTGCTGAtgctgc                                                                                 <  2:4584123/93‑1 (MQ=255)

       cGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATgctgct                                                                                <  1:3976273/93‑1 (MQ=255)

        gTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGctgctg                                                                               >  2:2291754/1‑93 (MQ=255)

         ttACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGa                                                                              <  2:3080810/93‑1 (MQ=255)

         ttACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTGATGCTGCTGa                                                                              <  1:2671749/93‑1 (MQ=255)

          tACCGATCCGCTGATGTCACTGGAATTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGctgctgcc                                                                             <  1:4530148/93‑3 (MQ=255)

             cGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACcgc                                                                          <  2:1072306/93‑1 (MQ=255)

              gATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACcgcg                                                                         >  1:2843010/1‑93 (MQ=255)

              gATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACcgcg                                                                         <  1:2018711/93‑1 (MQ=255)

              gATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACcgcg                                                                         >  1:4564219/1‑93 (MQ=255)

              gATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGATGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACcgcg                                                                         >  1:3237285/1‑93 (MQ=255)

               aTCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCgcgc                                                                        <  1:28181/93‑1 (MQ=255)

                tCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGcc                                                                       <  1:2419454/93‑1 (MQ=255)

                tCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGcc                                                                       <  1:3303618/93‑1 (MQ=255)

                tCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGcc                                                                       >  1:2378730/1‑93 (MQ=255)

                  cGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGa                                                                     >  2:2187873/1‑93 (MQ=255)

                   gCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGaa                                                                    >  1:2727993/1‑93 (MQ=255)

                   gCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGaa                                                                    >  2:2073600/1‑93 (MQ=255)

                    cTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGaaa                                                                   >  2:4629440/1‑93 (MQ=255)

                     tGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAAc                                                                  >  1:1152368/1‑93 (MQ=255)

                     tGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAAc                                                                  >  1:2324485/1‑93 (MQ=255)

                     tGATGTCACTGGAAGTCTAAGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAAc                                                                  >  2:4526554/1‑93 (MQ=255)

                      gATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACt                                                                 >  1:1571660/1‑93 (MQ=255)

                      gATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACt                                                                 >  1:3848336/1‑93 (MQ=255)

                      gATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGCGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACt                                                                 >  1:1187625/1‑93 (MQ=255)

                       aTGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTg                                                                <  2:2714929/93‑1 (MQ=255)

                          tCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCAc                                                             >  1:4678434/1‑93 (MQ=255)

                               ggAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCAt                                                        <  1:2045562/93‑1 (MQ=255)

                                gAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATg                                                       >  2:4424537/1‑93 (MQ=255)

                                  aGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGAc                                                     <  1:2725713/93‑1 (MQ=255)

                                  aGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGAc                                                     <  1:3680608/93‑1 (MQ=255)

                                   gTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACg                                                    >  2:3944073/1‑93 (MQ=255)

                                   gTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACg                                                    >  2:3931434/1‑93 (MQ=255)

                                   gTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACg                                                    >  1:467421/1‑93 (MQ=255)

                                    tCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGATATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGc                                                   >  1:3307739/1‑93 (MQ=255)

                                     cTATGGTCGCGTATTCTTGCAGATTGGAGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCa                                                  >  1:1625693/1‑93 (MQ=255)

                                      tATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAg                                                 >  1:1034499/1‑93 (MQ=255)

                                       aTGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAgg                                                >  1:2591561/1‑93 (MQ=255)

                                       aTGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAgg                                                >  1:4488628/1‑93 (MQ=255)

                                        tGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGa                                               <  2:3120395/93‑1 (MQ=255)

                                        tGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGa                                               <  1:4078813/93‑1 (MQ=255)

                                         ggTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGAt                                              >  2:2585500/1‑93 (MQ=255)

                                         ggTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGAt                                              <  1:421997/93‑1 (MQ=255)

                                          gTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATg                                             <  2:4348163/93‑1 (MQ=255)

                                           tCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGa                                            <  2:2510606/93‑1 (MQ=255)

                                            tgcgTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGAc                                           <  2:3879884/92‑1 (MQ=255)

                                              cgTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGc                                         <  2:1197750/93‑1 (MQ=255)

                                              cgTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGc                                         <  2:4421123/93‑1 (MQ=255)

                                               gTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCt                                        >  2:2894123/1‑93 (MQ=255)

                                               gTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCt                                        <  1:1670693/93‑1 (MQ=255)

                                                tATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTg                                       >  1:1461133/1‑93 (MQ=255)

                                                tATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTg                                       >  1:1162104/1‑93 (MQ=255)

                                                tATTCTTGCAGATTGGGGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTg                                       >  2:6730/1‑93 (MQ=255)

                                                  ttCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCa                                     >  2:29256/1‑93 (MQ=255)

                                                  ttCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCa                                     <  2:4002694/93‑1 (MQ=255)

                                                  ttCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCa                                     >  2:2513468/1‑93 (MQ=255)

                                                    cTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGa                                   <  1:700111/93‑1 (MQ=255)

                                                     ttGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGAc                                  <  1:3232914/93‑1 (MQ=255)

                                                     ttGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGAc                                  >  2:1289330/1‑93 (MQ=255)

                                                       gCAGATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACaa                                >  1:4487533/1‑93 (MQ=255)

                                                          gATTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAgc                             >  1:3752997/1‑93 (MQ=255)

                                                           aTTGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAgcg                            <  1:193537/93‑1 (MQ=255)

                                                            ttGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAgcgg                           >  1:2791445/1‑93 (MQ=255)

                                                            ttGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAgcgg                           >  1:4545421/1‑93 (MQ=255)

                                                            ttGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAgcgg                           <  2:558117/93‑1 (MQ=255)

                                                             tGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAgcggc                          >  2:1201161/1‑93 (MQ=255)

                                                             tGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAgcggc                          <  2:1067847/93‑1 (MQ=255)

                                                             tGGTGTCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAgcggc                          >  1:1596902/1‑93 (MQ=255)

                                                               gtatCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCAGGACGCAGGATGACGCTGCAGACAAAGCGGCGa                        <  1:1801127/90‑1 (MQ=255)

                                                                 gtCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGaaa                      <  2:2244111/93‑1 (MQ=255)

                                                                 gtCGCTACTGCCGTTATTGCAGTGCTGAGGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGaaa                      <  1:917241/93‑1 (MQ=255)

                                                                  tCGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAag                     <  1:2565405/93‑1 (MQ=255)

                                                                   cGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAagc                    <  2:3311072/93‑1 (MQ=255)

                                                                   cGCTACTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAagc                    >  1:2831485/1‑93 (MQ=255)

                                                                      tactacCTTAATTGCAGTGCTGATGCTCCTGCCCGCGCCGAAGCTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAagcacc                 <  2:3554108/93‑3 (MQ=255)

                                                                       aCTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGcc                >  2:2864181/1‑93 (MQ=255)

                                                                       aCTGCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGcc                >  1:899134/1‑93 (MQ=255)

                                                                          gCCGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTa             >  2:619579/1‑93 (MQ=255)

                                                                           ccGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAg            <  2:3844684/93‑1 (MQ=255)

                                                                           ccGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAg            <  1:1597822/93‑1 (MQ=255)

                                                                            cGTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGc           <  1:539720/93‑1 (MQ=255)

                                                                             gTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCg          >  2:1315944/1‑93 (MQ=255)

                                                                             gTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCg          >  2:2553916/1‑93 (MQ=255)

                                                                             gTTATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCg          >  2:3654197/1‑93 (MQ=255)

                                                                              ttATTGCCGTGCTGATGCTGCTGACAGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCCGGCAAAGCGGCGAATGCAGCCGTAGCGt         >  2:3308540/1‑93 (MQ=255)

                                                                              ttATTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCga         >  1:1449320/1‑92 (MQ=255)

                                                                              ttATTGCAGTGCTCATGCTGCTGCCCGCGCCGAAACTGCACCGCATGACGCAGAATGACGCTGCAGACAAAGCGGCGAAAGCGGCCGTAGCGt         <  2:55884/93‑1 (MQ=255)

                                                                                aTTGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTaa       >  1:978262/1‑93 (MQ=255)

                                                                                  tGCAGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTaaaa     >  2:4025162/1‑93 (MQ=255)

                                                                                     aGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTc  <  1:2940865/93‑1 (MQ=255)

                                                                                     aGTGCTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTc  >  2:553622/1‑93 (MQ=255)

CGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTC  >  NC_000913/1712123‑1712300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`