Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,719,329 A→G V14V (GTA→GTG b1644 → putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,719,3290AG93.9% 368.8 / 9.4 132V14V (GTA→GTGb1644putative membrane protein
Reads supporting (aligned to +/- strand):  ref base A (4/4);  new base G (58/66);  total (62/70)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 134 total aligned reads displayed.

TTGCGATTTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGAACA  >  NC_000913/1719239‑1719418
                                                                                          |                                                                                         
  gCGATTTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCgg                                                                                       <  1:2467826/93‑1 (MQ=255)
   cGATTTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGt                                                                                      <  1:3866235/93‑1 (MQ=255)
    gATTTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTa                                                                                     >  1:2750718/1‑93 (MQ=255)
     aTTTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAg                                                                                    >  1:574816/1‑93 (MQ=255)
      tttGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGt                                                                                   <  1:4439130/93‑1 (MQ=255)
      tttGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGt                                                                                   >  1:3278833/1‑93 (MQ=255)
       ttGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGtt                                                                                  >  2:4379069/1‑93 (MQ=255)
       ttGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGtt                                                                                  <  2:2142611/93‑1 (MQ=255)
       ttGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGtt                                                                                  <  1:764180/93‑1 (MQ=255)
       ttGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGtt                                                                                  <  1:676274/93‑1 (MQ=255)
         gCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGc                                                                                <  2:2415814/93‑1 (MQ=255)
           gTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCgg                                                                              >  1:1087147/1‑93 (MQ=255)
           gTTTGCCTCGCTCTGGCAACACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGTgg                                                                              >  2:4585313/1‑93 (MQ=255)
            tttGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGt                                                                             >  1:4342530/1‑93 (MQ=255)
              tGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTc                                                                           <  1:4329326/93‑1 (MQ=255)
              tGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTc                                                                           <  1:4584018/93‑1 (MQ=255)
               gCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAACACAATTAAGTATTTCCCACCAATCATTGTGGCGGTAGTTGCGGTTCt                                                                          <  1:1806884/93‑1 (MQ=255)
               gCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCt                                                                          >  2:1244532/1‑93 (MQ=255)
                ccTTGCTCTGGCATTACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCtt                                                                         <  1:4260131/93‑1 (MQ=255)
                ccTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCGGTTCtt                                                                         >  2:2428210/1‑93 (MQ=255)
                 cTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTg                                                                        >  2:4430976/1‑93 (MQ=255)
                  ttGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGc                                                                       <  1:1556261/93‑1 (MQ=255)
                      tctGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGa                                                                   <  1:2773507/93‑1 (MQ=255)
                       ctGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGAt                                                                  <  2:2703964/93‑1 (MQ=255)
                       ctGCCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGAt                                                                  <  2:2876305/93‑1 (MQ=255)
                        tGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGAtg                                                                 >  1:3050088/1‑93 (MQ=255)
                          gCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGAtggt                                                               <  2:4594403/93‑1 (MQ=255)
                          gCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGAtggt                                                               <  2:2544982/93‑1 (MQ=255)
                          gCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGAtggt                                                               <  2:202240/93‑1 (MQ=255)
                          gCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGAtggt                                                               <  2:56972/93‑1 (MQ=255)
                           cAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGAtggtg                                                              <  2:879841/93‑1 (MQ=255)
                           cAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCGGTTCTTGCCGGAtggtg                                                              <  2:1785260/93‑1 (MQ=255)
                             aTACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGc                                                            <  2:66950/93‑1 (MQ=255)
                              tACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGTCGGAGGGTGGCt                                                           >  1:2069666/1‑93 (MQ=255)
                              tACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCt                                                           <  1:3731078/93‑1 (MQ=255)
                                cTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGGTGGTGGCtgg                                                         >  1:1245561/1‑92 (MQ=255)
                                cTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCtgt                                                         >  1:4479579/1‑93 (MQ=255)
                                 tGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCtgtg                                                        >  2:3881733/1‑93 (MQ=255)
                                   aTTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGa                                                      <  2:4684259/93‑1 (MQ=255)
                                   aTTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGa                                                      >  1:4325783/1‑93 (MQ=255)
                                   aTTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGa                                                      <  2:3569941/93‑1 (MQ=255)
                                   aTTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGa                                                      >  2:2928781/1‑93 (MQ=255)
                                    ttGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGaa                                                     >  1:4598242/1‑93 (MQ=255)
                                    tggCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGaa                                                     <  2:1598365/91‑1 (MQ=255)
                                     tGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAat                                                    <  1:964582/93‑1 (MQ=255)
                                       cGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAatta                                                  <  1:420058/93‑1 (MQ=255)
                                        gTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAattat                                                 >  2:4361753/1‑93 (MQ=255)
                                          ggTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGTattattc                                               >  1:3749749/1‑92 (MQ=255)
                                          ggTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAAttatta                                               <  1:2794955/93‑1 (MQ=255)
                                          ggTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAAttatta                                               >  1:1945996/1‑93 (MQ=255)
                                             aaCTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACAt                                            >  2:1294277/1‑93 (MQ=255)
                                             aaCTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACAt                                            <  2:204789/93‑1 (MQ=255)
                                             aaCTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACAt                                            <  1:3085110/93‑1 (MQ=255)
                                              aCTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATg                                           >  2:2987707/1‑93 (MQ=255)
                                              aCTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATg                                           <  2:2141757/93‑1 (MQ=255)
                                               cTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGc                                          <  1:2259337/93‑1 (MQ=255)
                                                tATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCa                                         <  1:3199843/93‑1 (MQ=255)
                                                tATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCa                                         >  1:1008874/1‑93 (MQ=255)
                                                 aTGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCaa                                        <  2:4158151/93‑1 (MQ=255)
                                                  tGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAAt                                       >  2:2414193/1‑93 (MQ=255)
                                                  tGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAAt                                       <  1:2217382/93‑1 (MQ=255)
                                                  tGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAAt                                       <  1:610345/93‑1 (MQ=255)
                                                   gTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAAtc                                      <  1:4415674/93‑1 (MQ=255)
                                                   gTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAAtc                                      <  1:4415675/93‑1 (MQ=255)
                                                     cAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAAtctc                                    <  2:1319875/93‑1 (MQ=255)
                                                     cAATTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAAtctc                                    >  1:552444/1‑93 (MQ=255)
                                                       aTTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCg                                  >  1:3017923/1‑93 (MQ=255)
                                                       aTTAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCg                                  <  2:4222164/93‑1 (MQ=255)
                                                        ttAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGt                                 <  1:3872015/93‑1 (MQ=255)
                                                        ttAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGt                                 >  1:530830/1‑93 (MQ=255)
                                                         tAAAACAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTg                                >  1:910888/1‑93 (MQ=255)
                                                           aaaCAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGa                              <  2:2118274/93‑1 (MQ=255)
                                                           aaaCAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGa                              <  1:3604269/93‑1 (MQ=255)
                                                           aaaCAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGa                              <  1:3303567/93‑1 (MQ=255)
                                                            aaCAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGac                             >  1:4116690/1‑93 (MQ=255)
                                                              cAATTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGacac                           <  1:2339115/93‑1 (MQ=255)
                                                               aaTTAAGTATTTCTCAACAATCATTGTGGCGGTAGTTTCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACAcg                          >  2:4079048/1‑93 (MQ=255)
                                                                    aGTATTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACg                     <  1:3428038/93‑1 (MQ=255)
                                                                       aTTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGa                  >  1:3239376/1‑93 (MQ=255)
                                                                       aTTTCTCAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGa                  >  2:506839/1‑93 (MQ=255)
                                                                           ctcAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAAt              >  1:1181160/1‑93 (MQ=255)
                                                                           ctcAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAAt              <  2:3392099/93‑1 (MQ=255)
                                                                            tcAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGGAAATa             >  2:2827032/1‑93 (MQ=255)
                                                                            tcAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATa             >  1:1767272/1‑93 (MQ=255)
                                                                            tcAACAATCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATa             >  2:2240565/1‑93 (MQ=255)
                                                                             caacaaTCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATAc            <  1:2109547/93‑1 (MQ=255)
                                                                              aacaaTCATTGTGGCGGTAGGTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGGGGGCACGCGACGGGAAAATGcg           >  1:2288711/1‑93 (MQ=255)
                                                                                caaTCATTGTAGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATAcgcg         >  2:1179033/1‑93 (MQ=255)
                                                                                 aaTCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATAAgcgc        >  1:1801547/1‑93 (MQ=255)
                                                                                  aTCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCa       <  2:1339074/93‑1 (MQ=255)
                                                                                  aTCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCa       <  1:3136491/93‑1 (MQ=255)
                                                                                   tCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGGAAATACGCGCAg      >  2:1244371/1‑93 (MQ=255)
                                                                                   tCATTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAg      >  2:3531943/1‑93 (MQ=255)
                                                                                     aTTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAgga    >  2:4498478/1‑91 (MQ=255)
                                                                                     aTTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGaa    >  1:2213601/1‑93 (MQ=255)
                                                                                     aTTGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGaa    >  2:3182225/1‑93 (MQ=255)
                                                                                      ttGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGAAc   >  2:3725670/1‑93 (MQ=255)
                                                                                      ttGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGAAc   >  1:4261907/1‑93 (MQ=255)
                                                                                      ttGTGGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGAAc   >  1:1546780/1‑93 (MQ=255)
                                                                                       tgtgGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGAACa  <  2:1591252/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTGCGATTTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAACTATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGAACA  >  NC_000913/1719239‑1719418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: