BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	177,386	C→T	R80H (CGC→CAC)	yadS ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	177,386	0	C	T	100.0%	563.5 / NA	160	R80H (CGC→CAC)	yadS	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (79/81); total (79/81)

Only 100 of 174 total aligned reads displayed.

AAGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGCGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGC  >  NC_000913/177296‑177475

aaGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCGGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGgtgc                                                                                         <  2:139959/93‑1 (MQ=255)

aaGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGgtgc                                                                                         >  2:2807066/1‑93 (MQ=255)

  ggCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCAc                                                                                       >  1:2602252/1‑93 (MQ=255)

   gCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCAcc                                                                                      >  1:1087617/1‑93 (MQ=255)

   gCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCAcc                                                                                      >  1:3286180/1‑93 (MQ=255)

   gCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCAcc                                                                                      <  2:3009214/93‑1 (MQ=255)

      ttATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGc                                                                                   <  2:703439/93‑1 (MQ=255)

      ttATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGc                                                                                   <  2:3797571/93‑1 (MQ=255)

       tATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCa                                                                                  >  2:4592435/1‑93 (MQ=255)

       tATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCa                                                                                  >  2:1439855/1‑93 (MQ=255)

        aTTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCAc                                                                                 <  1:2462200/93‑1 (MQ=255)

          tCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGa                                                                               <  2:1177431/93‑1 (MQ=255)

           cACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGAt                                                                              <  1:571709/93‑1 (MQ=255)

           cACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGAt                                                                              <  1:3633219/93‑1 (MQ=255)

             cGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATgg                                                                            <  2:2290710/93‑1 (MQ=255)

               ccAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTc                                                                          <  1:2592227/93‑1 (MQ=255)

                cAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCa                                                                         >  1:3474462/1‑93 (MQ=255)

                 aaTGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAg                                                                        >  1:543277/1‑93 (MQ=255)

                  aTGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCTATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGc                                                                       >  2:2576478/1‑93 (MQ=255)

                  aTGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGc                                                                       >  2:192026/1‑93 (MQ=255)

                   tGCCGACAAACCCCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCa                                                                      <  1:2007716/93‑1 (MQ=255)

                   tGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCa                                                                      >  1:941698/1‑93 (MQ=255)

                    gCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCAt                                                                     <  2:4430435/93‑1 (MQ=255)

                         cAAACACCGCCAGACCAACGGTGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTgg                                                                <  1:2693757/93‑1 (MQ=255)

                         cAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTgg                                                                >  1:258323/1‑93 (MQ=255)

                          aaaCACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGt                                                               >  1:4014793/1‑93 (MQ=255)

                            acacCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGa                                                             >  2:3301099/1‑93 (MQ=255)

                              acCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGAcc                                                           >  1:4490109/1‑93 (MQ=255)

                              acCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGAcc                                                           >  1:1561531/1‑93 (MQ=255)

                              acCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGAcc                                                           >  1:4343191/1‑93 (MQ=255)

                               ccGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCa                                                          >  1:1545419/1‑93 (MQ=255)

                               ccGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCa                                                          <  1:4370046/93‑1 (MQ=255)

                               ccGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCa                                                          <  1:1966988/93‑1 (MQ=255)

                               ccGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCa                                                          <  1:914400/93‑1 (MQ=255)

                                cGCCACACCAACGGCGTCCAGCCCGGGCAACATCCAGTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCAt                                                         <  2:2657966/93‑1 (MQ=255)

                                  ccAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTg                                                       >  1:2382208/1‑93 (MQ=255)

                                   cAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGc                                                      <  1:4506107/93‑1 (MQ=255)

                                    aGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCa                                                     >  1:4110548/1‑93 (MQ=255)

                                    aGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCa                                                     >  1:3526688/1‑93 (MQ=255)

                                    aGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCa                                                     >  1:2194461/1‑93 (MQ=255)

                                     taCCAACGGCGTCCAGCGCCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGTCCATTGCaa                                                    <  2:3122152/92‑1 (MQ=255)

                                     gACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCaa                                                    >  2:121147/1‑93 (MQ=255)

                                     gACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCaa                                                    >  2:2605532/1‑93 (MQ=255)

                                     gACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCaa                                                    <  1:1870650/93‑1 (MQ=255)

                                     gACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCaa                                                    <  1:3611215/93‑1 (MQ=255)

                                     gACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCaa                                                    >  2:3509702/1‑93 (MQ=255)

                                      aCCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAAc                                                   <  1:3144810/93‑1 (MQ=255)

                                      aCCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAAc                                                   <  2:1130411/93‑1 (MQ=255)

                                          aCGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGAcc                                               <  2:1491234/93‑1 (MQ=255)

                                          aCGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGAcc                                               >  1:2741330/1‑93 (MQ=255)

                                          aCGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGAcc                                               >  2:1633579/1‑93 (MQ=255)

                                             gCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGa                                            <  1:3998683/93‑1 (MQ=255)

                                             gCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGa                                            <  1:3454301/93‑1 (MQ=255)

                                              cGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGAt                                           <  2:2444495/93‑1 (MQ=255)

                                               gTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATc                                          <  1:1445864/93‑1 (MQ=255)

                                                tCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCg                                         >  1:4048852/1‑93 (MQ=255)

                                                  cAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGt                                       >  1:2263722/1‑93 (MQ=255)

                                                   aGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTg                                      <  2:3810100/93‑1 (MQ=255)

                                                   aGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTg                                      >  1:2106991/1‑93 (MQ=255)

                                                   aGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTg                                      >  2:2110488/1‑93 (MQ=255)

                                                    gCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTgg                                     <  1:1770346/93‑1 (MQ=255)

                                                    gCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTgg                                     <  1:2839738/93‑1 (MQ=255)

                                                     cACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTggg                                    <  2:795577/93‑1 (MQ=255)

                                                      aCCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGa                                   >  2:2702080/1‑93 (MQ=255)

                                                       ccGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGAt                                  <  2:4519963/93‑1 (MQ=255)

                                                        cGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATc                                 >  2:3203246/1‑93 (MQ=255)

                                                          gCAACATCCATTTTGGTAAGCGTCTTGGCTTGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCtt                               <  1:3676340/93‑1 (MQ=255)

                                                           cAACATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCttt                              <  2:2596486/93‑1 (MQ=255)

                                                            aaCATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGGTCTTTc                             >  2:2878167/1‑93 (MQ=255)

                                                            aaCATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTc                             >  2:1771928/1‑93 (MQ=255)

                                                             aCATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCa                            <  1:1073355/93‑1 (MQ=255)

                                                             aCATCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCa                            <  1:1268178/93‑1 (MQ=255)

                                                               aTCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCAGGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCAcc                          <  2:4157327/93‑1 (MQ=255)

                                                                tCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCAccc                         >  2:4107689/1‑93 (MQ=255)

                                                                tCCATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCAccc                         <  2:2229670/93‑1 (MQ=255)

                                                                  cATTTTGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCaa                       <  1:3114186/93‑1 (MQ=255)

                                                                    ttttGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCaaaa                     <  2:4652209/93‑1 (MQ=255)

                                                                      ttGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATa                   <  1:527386/93‑1 (MQ=255)

                                                                       tGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATAc                  <  1:947423/93‑1 (MQ=255)

                                                                       tGGTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATAc                  <  2:616838/93‑1 (MQ=255)

                                                                        ggTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATAcc                 <  1:4334172/93‑1 (MQ=255)

                                                                        ggTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATAcc                 <  2:2429538/93‑1 (MQ=255)

                                                                        ggTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATAcc                 >  1:3403873/1‑93 (MQ=255)

                                                                        ggTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATAcc                 <  1:2821677/93‑1 (MQ=255)

                                                                         gTAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCg                <  1:1200044/93‑1 (MQ=255)

                                                                         gTAAGCGTCTTAGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACACAAAATACCg                >  2:2257889/1‑93 (MQ=255)

                                                                          tAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCgg               <  1:1647164/93‑1 (MQ=255)

                                                                          tAAGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCgg               <  2:1990083/93‑1 (MQ=255)

                                                                            aGCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGc             <  2:3551337/93‑1 (MQ=255)

                                                                             gCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGcc            <  2:1850262/93‑1 (MQ=255)

                                                                             gCGTCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGcc            >  2:3938642/1‑93 (MQ=255)

                                                                                tCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTg         >  1:3785615/1‑93 (MQ=255)

                                                                                tCTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCGTTCACCCAAAATACCGGGCCGTg         >  2:1752881/1‑93 (MQ=255)

                                                                                 cTTGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGa        <  2:1828366/93‑1 (MQ=255)

                                                                                  ttGGCTGGTGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGAt       <  1:104282/93‑1 (MQ=255)

                                                                                    ggctggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATcc     <  1:3921046/93‑1 (MQ=255)

                                                                                     gctggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCa    >  1:1428302/1‑93 (MQ=255)

                                                                                       tggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAgc  >  2:4288648/1‑93 (MQ=255)

                                                                                       tggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAgc  <  2:4388563/93‑1 (MQ=255)

                                                                                       tggtGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAgc  <  2:1341382/93‑1 (MQ=255)

AAGGCTTTATTCACGCCAATGCCGACAAACACCGCCAGACCAACGGCGTCCAGCACCGGCAACATCCATTTTGGTAAGCGTCTTGGCTGGCGCACCAGCACGATGGTCAGCATGCTGGTGACCATTGCAACGACCAGATCGGTGGGATCTTTCACCCAAAATACCGGGCCGTGATCCAGC  >  NC_000913/177296‑177475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`