BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,759,287	G→A	L177L (CTG→TTG)	ynhC ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,759,287	0	G	A	99.0%	347.8 / ‑5.1	99	L177L (CTG→TTG)	ynhC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (54/44); total (55/44)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.64e-01

Only 100 of 109 total aligned reads displayed.

CGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCC  >  NC_000913/1759197‑1759376

cGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaat                                                                                         >  2:2385385/1‑93 (MQ=255)

  ttGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatcc                                                                                       >  1:1168982/1‑93 (MQ=255)

  ttGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatcc                                                                                       >  1:4456226/1‑93 (MQ=255)

    gATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccag                                                                                     >  1:2974428/1‑93 (MQ=255)

     aTAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccaga                                                                                    <  2:4367778/93‑1 (MQ=255)

      tAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccagat                                                                                   <  1:2603693/93‑1 (MQ=255)

      tAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccagat                                                                                   >  1:3459043/1‑93 (MQ=255)

      tAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGccaaatccagat                                                                                   >  1:4481054/1‑93 (MQ=255)

       aGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAgatg                                                                                  <  1:389138/93‑1 (MQ=255)

        gTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAgatga                                                                                 <  1:455380/93‑1 (MQ=255)

          gAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGatgatg                                                                               <  2:2072364/93‑1 (MQ=255)

           aaCCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGt                                                                              >  2:1999117/1‑93 (MQ=255)

            aCCGTTCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTc                                                                             <  2:3419635/93‑1 (MQ=255)

             ccGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCg                                                                            <  2:3867225/93‑1 (MQ=255)

             ccGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCg                                                                            >  2:3002955/1‑93 (MQ=255)

              cGTGCCCCGATAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAAATGATGTCgg                                                                           <  2:2840474/93‑1 (MQ=255)

                   cccGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATg                                                                      <  1:412774/93‑1 (MQ=255)

                     cGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATggg                                                                    >  1:1994951/1‑93 (MQ=255)

                     cGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATggg                                                                    >  2:2367843/1‑93 (MQ=255)

                      ggTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGc                                                                   >  1:2286743/1‑93 (MQ=255)

                      ggTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGc                                                                   <  1:3305862/93‑1 (MQ=255)

                      ggTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGc                                                                   <  2:1441612/93‑1 (MQ=255)

                       gTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCa                                                                  >  1:612473/1‑93 (MQ=255)

                         aaaaTGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAgt                                                                <  1:3493271/93‑1 (MQ=255)

                          aaaTGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAgtg                                                               >  2:2462257/1‑93 (MQ=255)

                             tcaCGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTc                                                            <  1:1259349/91‑1 (MQ=255)

                              gACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCa                                                           >  1:1233738/1‑93 (MQ=255)

                              gACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCa                                                           <  2:3914050/93‑1 (MQ=255)

                                cGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCAcc                                                         >  2:724474/1‑93 (MQ=255)

                                cGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCAcc                                                         >  1:1899570/1‑93 (MQ=255)

                                cGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCAcc                                                         <  2:3925042/93‑1 (MQ=255)

                                 gAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACct                                                        <  1:2610502/93‑1 (MQ=255)

                                 gAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACct                                                        >  2:3925879/1‑93 (MQ=255)

                                 gAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCAGCCAAATCCAGCTGATGTCGGTAATGGGCAGTGCTCACct                                                        >  1:174678/1‑93 (MQ=255)

                                 gAGCATAATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACct                                                        >  2:3898870/1‑93 (MQ=255)

                                  aGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACctc                                                       >  2:2496046/1‑93 (MQ=255)

                                   gCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACctct                                                      <  2:1747575/93‑1 (MQ=255)

                                   gCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACctct                                                      >  2:150850/1‑93 (MQ=255)

                                    catcatTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCtt                                                     <  2:3502394/93‑1 (MQ=255)

                                    catcatTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCtt                                                     >  2:4684933/1‑93 (MQ=255)

                                     atcatTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTc                                                    <  2:3845460/93‑1 (MQ=255)

                                      tcatTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCa                                                   >  2:2282597/1‑93 (MQ=255)

                                        atTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCAcc                                                 <  2:2103694/93‑1 (MQ=255)

                                        atTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCAcc                                                 <  2:1299110/93‑1 (MQ=255)

                                        atTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCAcc                                                 >  1:2808091/1‑93 (MQ=255)

                                         ttCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCt                                                <  2:2878261/93‑1 (MQ=255)

                                         ttCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCt                                                >  1:3471820/1‑93 (MQ=255)

                                            aGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGcc                                             >  1:441192/1‑93 (MQ=255)

                                             ggCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCa                                            <  1:1934870/93‑1 (MQ=255)

                                              gCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCAc                                           <  1:4239717/93‑1 (MQ=255)

                                                 gACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGcc                                        >  1:1632315/1‑93 (MQ=255)

                                                 gACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGcc                                        >  1:2390701/1‑93 (MQ=255)

                                                 gACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGcc                                        >  1:4189423/1‑93 (MQ=255)

                                                   cAAAATTTTCGATCACCGTTGCTTCGGCACCTCCCGCAAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCt                                      <  1:1835884/93‑1 (MQ=255)

                                                   cAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCt                                      <  1:1416048/93‑1 (MQ=255)

                                                   aaaaaTGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCt                                      <  2:1346017/92‑1 (MQ=255)

                                                    aaaaTGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTg                                     >  1:2725612/1‑93 (MQ=255)

                                                    aaaaTGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTg                                     <  1:2186243/93‑1 (MQ=255)

                                                     aaaTGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTgg                                    >  2:4318701/1‑93 (MQ=255)

                                                       aTGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTTGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGt                                  >  1:2112000/1‑93 (MQ=255)

                                                       aTGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGt                                  <  2:2234508/93‑1 (MQ=255)

                                                       aTGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGt                                  <  1:2700827/93‑1 (MQ=255)

                                                         gTTCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGa                                >  2:1882758/1‑93 (MQ=255)

                                                           tCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGata                              <  2:3311162/93‑1 (MQ=255)

                                                           tCGATCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGata                              <  1:903631/93‑1 (MQ=255)

                                                               tCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCa                          <  2:1521284/93‑1 (MQ=255)

                                                               tCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCa                          >  1:2205731/1‑93 (MQ=255)

                                                               tCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCa                          <  2:752260/93‑1 (MQ=255)

                                                               tCACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGAAATGGGCAGAGCTAACCTCTTCACCTGCCACGGCCTGGTGGATCTGCa                          >  2:4491529/1‑93 (MQ=255)

                                                                cACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAt                         <  1:3024274/93‑1 (MQ=255)

                                                                cACCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAt                         >  1:2821657/1‑93 (MQ=255)

                                                                 aCCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAtt                        >  2:1749433/1‑93 (MQ=255)

                                                                 aCCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAtt                        >  1:4338435/1‑93 (MQ=255)

                                                                 aCCGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCAtt                        >  2:4082758/1‑93 (MQ=255)

                                                                  ccGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTa                       >  2:216629/1‑93 (MQ=255)

                                                                  ccGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTa                       >  2:3607977/1‑93 (MQ=255)

                                                                   cGTTGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTaa                      <  2:868976/93‑1 (MQ=255)

                                                                     ttGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACa                    >  1:522458/1‑93 (MQ=255)

                                                                     ttGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACa                    >  2:4651422/1‑93 (MQ=255)

                                                                     ttGCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACa                    >  1:1035440/1‑93 (MQ=255)

                                                                       gCTTCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGc                  >  1:2523796/1‑93 (MQ=255)

                                                                         ttCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCaa                >  2:102855/1‑93 (MQ=255)

                                                                          tCGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAAt               <  1:1982471/93‑1 (MQ=255)

                                                                           cGGCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATg              <  1:2410237/93‑1 (MQ=255)

                                                                             gCACCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGc            <  1:821854/93‑1 (MQ=255)

                                                                               aCCTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCtt          <  2:4148556/93‑1 (MQ=255)

                                                                               aCCTCCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCtt          <  2:2881172/93‑1 (MQ=255)

                                                                                ccTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCttt         <  1:1498945/93‑1 (MQ=255)

                                                                                ccTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCttt         <  2:2741696/93‑1 (MQ=255)

                                                                                ccTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCttt         >  2:3360079/1‑93 (MQ=255)

                                                                                 cTTCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTg        >  2:4303750/1‑93 (MQ=255)

                                                                                  ttCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCCCCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgc       <  1:3346799/93‑1 (MQ=255)

                                                                                  ttCCGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgc       >  1:1520676/1‑93 (MQ=255)

                                                                                    ccGCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgccg     >  1:797908/1‑93 (MQ=255)

                                                                                      gCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCCCGCCCTGGGTGATATGCATTCACAGCAATGGCTTTgccggc   >  2:2097513/1‑93 (MQ=255)

                                                                                      gCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgccggc   >  2:1475904/1‑93 (MQ=255)

                                                                                      gCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgccggc   >  2:2097512/1‑93 (MQ=255)

                                                                                      gCCAAATCCAGATGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgccggc   >  2:2428572/1‑93 (MQ=255)

                                                                                       ccaaatccagatGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgccggcc  <  2:1766111/93‑1 (MQ=255)

                                                                                       ccaaatccagatGATGTCGGTAATGGGCAGTGCTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTgccggcc  <  2:1078009/93‑1 (MQ=255)

CGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCAGATCCAGATGATGTCGGTAATGGGCAGTGTTCACCTCTTCACCTGCCACGCCCTGGGTGATATGCATTAACAGCAATGGCTTTGCCGGCC  >  NC_000913/1759197‑1759376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`