BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,778,478	T→C	A18A (GCT→GCC)	ydiR →	putative flavoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,778,478	0	T	C	100.0%	414.7 / NA	131	A18A (GCT→GCC)	ydiR	putative flavoprotein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (64/67); total (64/67)

Only 100 of 136 total aligned reads displayed.

GAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGG  >  NC_000913/1778390‑1778567

gaaAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATACTGAACGTTATGCCGAAc                                                                                       >  2:2826113/1‑93 (MQ=255)

 aaaGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACt                                                                                      <  1:3649013/93‑1 (MQ=255)

  aaGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTg                                                                                     >  1:2267359/1‑93 (MQ=255)

   aGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGt                                                                                    >  2:2713717/1‑93 (MQ=255)

   aGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGt                                                                                    <  1:2597968/93‑1 (MQ=255)

    gCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGtt                                                                                   >  2:1841443/1‑93 (MQ=255)

     cccTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGttt                                                                                  <  1:3847649/93‑1 (MQ=255)

      ccTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTg                                                                                 >  2:77385/1‑93 (MQ=255)

      ccTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTg                                                                                 >  2:4468571/1‑93 (MQ=255)

        tgaactgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTggc                                                                               <  1:1049062/93‑1 (MQ=255)

        tgaactgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTggc                                                                               <  1:1909857/93‑1 (MQ=255)

             tgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGgcgc                                                                          <  1:1731725/93‑1 (MQ=255)

             tgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGgcgc                                                                          <  2:816439/93‑1 (MQ=255)

             tgaaGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGgcgc                                                                          <  2:587926/93‑1 (MQ=255)

                aGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCa                                                                       <  2:3563645/93‑1 (MQ=255)

                aGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCa                                                                       >  1:156268/1‑93 (MQ=255)

                     aCGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAAt                                                                  <  2:3068069/93‑1 (MQ=255)

                     aCGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAAt                                                                  >  2:87816/1‑93 (MQ=255)

                      cGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATg                                                                 <  1:2298139/93‑1 (MQ=255)

                      cGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATg                                                                 <  2:4626380/93‑1 (MQ=255)

                       ggAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATgg                                                                <  1:2641414/93‑1 (MQ=255)

                       ggAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATgg                                                                >  2:3967731/1‑93 (MQ=255)

                       ggAGAAGAAACGATGAGTCAATGAAACAGCGTAAGGGTATTTAGCGATAATCCTGAACGTTCTGCAGAAGTGTCTGGAGGGGCTCAGCAATgg                                                                <  2:3657821/93‑1 (MQ=255)

                        gagaAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATggg                                                               <  2:2343453/93‑1 (MQ=255)

                        gagaAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATggg                                                               >  1:1823059/1‑93 (MQ=255)

                            agaaACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCa                                                           >  2:1064007/1‑93 (MQ=255)

                              aaaCGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAAc                                                         >  2:2907248/1‑93 (MQ=255)

                                 cGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAgg                                                      <  2:3519705/93‑1 (MQ=255)

                                  gATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGgt                                                     >  2:744350/1‑93 (MQ=255)

                                   aTGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGgtg                                                    >  2:2710186/1‑93 (MQ=255)

                                   aTGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGgtg                                                    >  2:2502173/1‑93 (MQ=255)

                                   aTGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGgtg                                                    >  1:4415228/1‑93 (MQ=255)

                                    tGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGgtgt                                                   >  2:3429911/1‑93 (MQ=255)

                                     taGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTa                                                  <  2:1160690/92‑1 (MQ=255)

                                     gAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTa                                                  <  2:4164521/93‑1 (MQ=255)

                                      aGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTAt                                                 >  1:867990/1‑93 (MQ=255)

                                      aGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTAt                                                 <  1:4552562/93‑1 (MQ=255)

                                        tCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGc                                               <  2:3259171/93‑1 (MQ=255)

                                          aaTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCa                                             >  1:3244906/1‑93 (MQ=255)

                                          aaTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCa                                             <  1:682168/93‑1 (MQ=255)

                                          aaTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCa                                             >  1:1451370/1‑93 (MQ=255)

                                          aaTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCa                                             >  2:597269/1‑93 (MQ=255)

                                          aaTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCa                                             <  1:3886285/93‑1 (MQ=255)

                                           aTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCAt                                            >  1:4543278/1‑93 (MQ=255)

                                           aTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCAt                                            >  1:1492707/1‑93 (MQ=255)

                                           aTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCAt                                            >  1:1492708/1‑93 (MQ=255)

                                           aTTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCAt                                            <  1:3687322/93‑1 (MQ=255)

                                            ttAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCAtt                                           >  1:2957411/1‑93 (MQ=255)

                                             tagaCAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGATCTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTg                                          <  2:3788240/90‑1 (MQ=255)

                                             tAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTg                                          <  2:3218575/93‑1 (MQ=255)

                                               aaCAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTa                                        >  2:4333771/1‑93 (MQ=255)

                                                aCAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTAc                                       >  1:4494769/1‑93 (MQ=255)

                                                 cAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACa                                      <  2:2464877/93‑1 (MQ=255)

                                                   gCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACaaa                                    >  1:869089/1‑93 (MQ=255)

                                                     gTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAAt                                  <  1:1017423/93‑1 (MQ=255)

                                                      tCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATa                                 <  2:963266/93‑1 (MQ=255)

                                                      tCTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGCCCAACAGGTGTATGCCATTGTACAAAATa                                 <  1:283121/93‑1 (MQ=255)

                                                       cTGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATAc                                <  2:1774379/93‑1 (MQ=255)

                                                        tgtgTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATAcc                               <  1:165151/90‑1 (MQ=255)

                                                        tGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATAcc                               >  2:2898164/1‑93 (MQ=255)

                                                        tGGGTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATAcc                               >  2:850625/1‑93 (MQ=255)

                                                         gggTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCg                              >  1:3351803/1‑93 (MQ=255)

                                                           gTCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGAc                            >  2:1867147/1‑93 (MQ=255)

                                                            tCTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGAcc                           >  2:525171/1‑93 (MQ=255)

                                                             cTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCa                          <  1:4511101/93‑1 (MQ=255)

                                                             cTTTAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCa                          <  1:879346/93‑1 (MQ=255)

                                                              tttAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAg                         >  1:3046918/1‑93 (MQ=255)

                                                              tttAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAg                         >  1:3032899/1‑93 (MQ=255)

                                                                tAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGgc                       <  1:1586878/93‑1 (MQ=255)

                                                                tAGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGgc                       <  2:4202797/93‑1 (MQ=255)

                                                                 aGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGgcg                      >  2:781632/1‑93 (MQ=255)

                                                                 aGCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGgcg                      >  2:297561/1‑93 (MQ=255)

                                                                  gCGATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGgcgc                     >  1:721643/1‑93 (MQ=255)

                                                                    gATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcag                   >  2:4607509/1‑93 (MQ=255)

                                                                    gATAATCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcag                   <  1:1215098/93‑1 (MQ=255)

                                                                     aTAATCCTGAACGTTACGCCGAACTGTTTGGCGGCGCTCAGCAATGGGTCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcagg                  <  1:2027708/93‑1 (MQ=255)

                                                                       aaTCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcaggca                <  2:3939745/93‑1 (MQ=255)

                                                                        aTCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcaggcag               >  1:1217409/1‑93 (MQ=255)

                                                                         tCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGt              >  2:4213097/1‑93 (MQ=255)

                                                                         tCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGt              <  1:3912033/93‑1 (MQ=255)

                                                                         tCCTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGt              <  2:217448/93‑1 (MQ=255)

                                                                          ccTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGtt             >  1:3636173/1‑93 (MQ=255)

                                                                           cTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTa            <  1:1735454/93‑1 (MQ=255)

                                                                           cTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTa            <  2:3373171/93‑1 (MQ=255)

                                                                           cTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTa            >  2:152377/1‑93 (MQ=255)

                                                                           cTGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTa            <  1:2732181/93‑1 (MQ=255)

                                                                            tGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACACAATACCGACCAGGCGCAGGCAGTTAt           >  2:4327372/1‑93 (MQ=255)

                                                                            tGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTAt           >  1:64334/1‑93 (MQ=255)

                                                                            tGAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTAt           >  2:1932260/1‑93 (MQ=255)

                                                                             gAACGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATg          >  1:1087770/1‑93 (MQ=255)

                                                                               aCGTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGcc        >  1:2070962/1‑93 (MQ=255)

                                                                                 gTTATGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCCTTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCtt      >  1:330733/1‑93 (MQ=255)

                                                                                    aTGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATg   <  2:834055/93‑1 (MQ=255)

                                                                                    aTGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATg   <  2:2013081/93‑1 (MQ=255)

                                                                                    aTGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATg   <  1:1260049/93‑1 (MQ=255)

                                                                                    aTGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATg   <  2:3305867/93‑1 (MQ=255)

                                                                                    aTGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATg   <  2:15074/93‑1 (MQ=255)

                                                                                     tGCCGAACTGTTTGGCGGCGCTCAGCAATGGGTCTAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATgg  <  2:2941773/93‑1 (MQ=255)

                                                                                     tGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATgg  <  2:1105590/93‑1 (MQ=255)

                                                                                     tGCCGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATgg  >  1:26438/1‑93 (MQ=255)

GAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGG  >  NC_000913/1778390‑1778567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`