BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	196,710	C→T	L55L (CTC→CTT)	yaeL →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	196,710	0	C	T	99.5%	662.4 / ‑5.5	183	L55L (CTC→CTT)	yaeL	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (98/84); total (98/85)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01

Only 100 of 188 total aligned reads displayed.

TCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCG  >  NC_000913/196620‑196799

 cATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGc                                                                                        >  1:3020728/1‑93 (MQ=255)

  aTTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCa                                                                                       >  1:474594/1‑93 (MQ=255)

  aTTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCa                                                                                       >  2:3138997/1‑93 (MQ=255)

  aTTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCa                                                                                       >  2:374286/1‑93 (MQ=255)

  aTTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCa                                                                                       >  2:367648/1‑93 (MQ=255)

   tttCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCAc                                                                                      >  2:1961215/1‑93 (MQ=255)

     tCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCg                                                                                    >  1:1527200/1‑93 (MQ=255)

       tGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGaa                                                                                  >  1:4173926/1‑93 (MQ=255)

        gggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAat                                                                                 <  1:2896197/93‑1 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  1:658269/93‑1 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  2:4025780/93‑1 (MQ=255)

         ggTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAata                                                                                <  1:3279044/93‑1 (MQ=255)

             gCCCGGCGTTGTGGTGTTCGCGCTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGtt                                                                            >  2:679384/1‑93 (MQ=255)

              cccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTa                                                                           >  1:1213277/1‑93 (MQ=255)

              cccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTa                                                                           <  2:4307197/93‑1 (MQ=255)

               ccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCCCCGAATATGTTAt                                                                          >  2:2022605/1‑93 (MQ=255)

               ccGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTAt                                                                          >  2:3826022/1‑93 (MQ=255)

                cGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATc                                                                         <  1:4113798/93‑1 (MQ=255)

                 ggCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCg                                                                        <  2:2598871/93‑1 (MQ=255)

                  gCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGACCTGATAAGCTTGGCACCGAATATGTTATCGc                                                                       >  1:2329914/1‑93 (MQ=255)

                     ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                    >  1:4628145/1‑93 (MQ=255)

                     ttGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCt                                                                    >  1:3568807/1‑93 (MQ=255)

                       gtggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGa                                                                  <  1:2621166/93‑1 (MQ=255)

                       gtggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGa                                                                  >  2:2954407/1‑93 (MQ=255)

                        tggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGAt                                                                 >  1:548418/1‑93 (MQ=255)

                         ggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGaac                                                                <  2:2958958/93‑3 (MQ=255)

                         ggtgTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATc                                                                >  1:3437530/1‑93 (MQ=255)

                          gtgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGAGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATcc                                                               <  2:1423924/93‑1 (MQ=255)

                           tgtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATccc                                                              <  1:2423741/93‑1 (MQ=255)

                            gtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCg                                                             >  1:1852344/1‑93 (MQ=255)

                            gtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCg                                                             <  2:2315451/93‑1 (MQ=255)

                            gtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCg                                                             <  2:3350930/93‑1 (MQ=255)

                            gtTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCg                                                             >  2:42960/1‑93 (MQ=255)

                             ttCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGt                                                            >  1:3741871/1‑93 (MQ=255)

                             ttCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGt                                                            <  1:249947/93‑1 (MQ=255)

                             ttCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGt                                                            >  2:2334703/1‑93 (MQ=255)

                              tCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGtt                                                           <  1:4507412/93‑1 (MQ=255)

                              tCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGtt                                                           <  2:344565/93‑1 (MQ=255)

                                gcgTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTgg                                                         >  1:3153456/1‑93 (MQ=255)

                                  gTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGc                                                       <  2:2072325/93‑1 (MQ=255)

                                  gTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGc                                                       <  1:889446/93‑1 (MQ=255)

                                       gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                  >  1:2094666/1‑93 (MQ=255)

                                       gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                  >  2:613241/1‑93 (MQ=255)

                                       gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                  <  2:1519692/93‑1 (MQ=255)

                                       gCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTa                                                  <  1:3481199/93‑1 (MQ=255)

                                         gTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATg                                                >  2:1422555/1‑93 (MQ=255)

                                          tttCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGt                                               <  1:4075719/93‑1 (MQ=255)

                                             ctcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaa                                            <  2:3214532/93‑1 (MQ=255)

                                              tcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCaaa                                           <  2:1766893/93‑1 (MQ=255)

                                              tcAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGAGCCCGTTGGGCGGTTATGTCaaa                                           <  2:4400717/93‑1 (MQ=255)

                                                aaTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAAt                                         >  1:952076/1‑93 (MQ=255)

                                                aaTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAAt                                         >  2:2914592/1‑93 (MQ=255)

                                                 aTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATg                                        >  2:4537845/1‑93 (MQ=255)

                                                 aTAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATg                                        <  1:304953/93‑1 (MQ=255)

                                                  tAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGc                                       <  2:35726/93‑1 (MQ=255)

                                                    gggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTg                                     <  2:4203796/93‑1 (MQ=255)

                                                    gggTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTg                                     <  1:3969116/93‑1 (MQ=255)

                                                    gggTCTGGGAAGGCCCTCGGGCGGCGAACTGATAAGCTTGGCACGGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTg                                     <  2:808527/93‑1 (MQ=255)

                                                      gTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGa                                   <  2:4087038/93‑1 (MQ=255)

                                                      gTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGa                                   <  1:3526071/93‑1 (MQ=255)

                                                      gTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCATGATCCCGCTGGGCGGTTATGTCAAAATGCTGGa                                   >  2:1078752/1‑93 (MQ=255)

                                                       tttGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGAt                                  >  2:3033337/1‑93 (MQ=255)

                                                        ttGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATg                                 <  1:1389832/93‑1 (MQ=255)

                                                         tGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGa                                <  2:3526632/93‑1 (MQ=255)

                                                           gTAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgc                              <  1:3118055/93‑1 (MQ=255)

                                                            tAAGGCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcg                             <  2:358157/93‑1 (MQ=255)

                                                            tAAGGCGCTCTGGCGGCGAACTGATAAGCCTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcg                             >  1:3883459/1‑93 (MQ=255)

                                                               ggCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcgc                          >  2:2687412/1‑93 (MQ=255)

                                                               ggCGCTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAgcgcgc                          <  2:273501/93‑1 (MQ=255)

                                                                gcgcTCTGGCGGCGAACTTATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTGAAAATGCTGGATGAGCGCGCa                         <  2:1902422/93‑1 (MQ=255)

                                                                 cgcTCTGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAg                        <  1:1046875/93‑1 (MQ=255)

                                                                   ctctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGaa                      >  2:33678/1‑93 (MQ=255)

                                                                    tctGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAAc                     <  1:1548170/93‑1 (MQ=255)

                                                                      tGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCg                   <  1:4304047/93‑1 (MQ=255)

                                                                      tGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCg                   >  2:4639729/1‑93 (MQ=255)

                                                                      tGGCGGCGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCg                   >  1:587764/1‑93 (MQ=255)

                                                                       ggcggcGAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGACCGCGCAGAACCgg                  <  2:4501488/93‑1 (MQ=255)

                                                                        gcggcgAACTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGt                 >  2:2790154/1‑93 (MQ=255)

                                                                              aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc           >  2:1001332/1‑93 (MQ=255)

                                                                              aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc           >  2:4668258/1‑93 (MQ=255)

                                                                              aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc           >  1:1922152/1‑93 (MQ=255)

                                                                              aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc           <  1:3655985/93‑1 (MQ=255)

                                                                              aaCTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTcc           >  1:57669/1‑93 (MQ=255)

                                                                                ctcaTAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCgg         <  2:1837306/90‑1 (MQ=255)

                                                                                cTGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCgg         >  1:4040051/1‑93 (MQ=255)

                                                                                 tGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGa        >  1:2009730/1‑93 (MQ=255)

                                                                                 tGATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGa        >  2:3909034/1‑93 (MQ=255)

                                                                                  gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       >  1:132415/1‑93 (MQ=255)

                                                                                  gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       >  1:1664370/1‑93 (MQ=255)

                                                                                  gATAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGaa       <  2:3066479/93‑1 (MQ=255)

                                                                                   aTAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGTATGAGCGCGCAGAACCGGTCGTTCCGGAAc      <  2:736964/93‑1 (MQ=255)

                                                                                    tAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACt     <  1:1594445/93‑1 (MQ=255)

                                                                                    tAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACt     >  1:2206325/1‑93 (MQ=255)

                                                                                    tAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACt     >  2:3096901/1‑93 (MQ=255)

                                                                                    tAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACt     >  1:3413646/1‑93 (MQ=255)

                                                                                    tAAGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACt     >  2:1700832/1‑93 (MQ=255)

                                                                                     aaGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTc    >  2:1351146/1‑93 (MQ=255)

                                                                                      aGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTcc   >  2:4546990/1‑93 (MQ=255)

                                                                                      aGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTcc   >  2:1618010/1‑93 (MQ=255)

                                                                                      aGCTTGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGGCGTTCCGGAACTcc   >  2:1132515/1‑93 (MQ=255)

TCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCG  >  NC_000913/196620‑196799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`