BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	17,618	A→G	T44A (ACG→GCG)	nhaA →	pH dependent Na+/H antiporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	17,618	0	A	G	100.0%	601.7 / NA	191	T44A (ACG→GCG)	nhaA	pH dependent Na+/H antiporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (94/97); total (94/97)

Only 100 of 200 total aligned reads displayed.

GGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGACGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTATTTTTCCTG  >  NC_000913/17528‑17707

 gAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGgcgc                                                                                        <  2:1798558/93‑1 (MQ=255)

    gCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCgg                                                                                     >  1:993779/1‑93 (MQ=255)

      attattCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGtt                                                                                   >  2:580213/1‑93 (MQ=255)

      attattCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGtt                                                                                   >  1:1095651/1‑93 (MQ=255)

       ttattCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTc                                                                                  >  1:3065942/1‑93 (MQ=255)

            tttATCAGTGCTGCTCTCCTGGCCATAACTATGGCCAACAGCGGCGCAACCAGTGCATAGTATCGCGACTAGCGGGAGGCGCAGGTTGAGCTc                                                                             <  2:2354789/92‑1 (MQ=255)

              tATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCg                                                                           >  1:1713119/1‑93 (MQ=255)

               aTCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCgg                                                                          <  2:1632183/93‑1 (MQ=255)

               aTCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCgg                                                                          >  2:3654584/1‑93 (MQ=255)

                 cATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGggt                                                                        <  1:4167911/93‑1 (MQ=255)

                  aTTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGggtt                                                                       >  2:938157/1‑93 (MQ=255)

                  aTTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGggtt                                                                       >  1:3634300/1‑93 (MQ=255)

                   ttGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGggttg                                                                      >  1:465856/1‑93 (MQ=255)

                      ccGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGggttggtt                                                                   <  2:4552797/93‑1 (MQ=255)

                         cTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCAc                                                                <  2:984893/93‑1 (MQ=255)

                         cTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCAc                                                                >  1:3873273/1‑93 (MQ=255)

                          tATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACt                                                               <  2:394374/93‑1 (MQ=255)

                           aTCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTc                                                              >  1:1778452/1‑93 (MQ=255)

                           aTCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTc                                                              <  2:843240/93‑1 (MQ=255)

                           aTCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTc                                                              <  1:1254740/93‑1 (MQ=255)

                            tCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCg                                                             >  1:2949111/1‑93 (MQ=255)

                                ggCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAAt                                                         >  2:2426466/1‑93 (MQ=255)

                                ggCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAAt                                                         <  1:678767/93‑1 (MQ=255)

                                 gCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATc                                                        >  2:2569516/1‑93 (MQ=255)

                                 gCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATc                                                        <  1:348582/93‑1 (MQ=255)

                                 gCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCCCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATc                                                        <  2:412204/93‑1 (MQ=255)

                                  cGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATca                                                       >  2:3779298/1‑93 (MQ=255)

                                   gatgatTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATcaa                                                      >  2:2791701/1‑93 (MQ=255)

                                   gatgatTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATcaa                                                      >  2:1356101/1‑93 (MQ=255)

                                    atgatTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTTACTCGAAATcaac                                                     >  1:894380/1‑93 (MQ=255)

                                    atgatTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATcaac                                                     >  1:1099994/1‑93 (MQ=255)

                                    atgatTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATcaac                                                     >  2:2025790/1‑93 (MQ=255)

                                    atgatTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATcaac                                                     >  2:1507804/1‑93 (MQ=255)

                                    atgatTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATcaac                                                     <  1:413650/93‑1 (MQ=255)

                                     tgatTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGCAATcaaca                                                    >  2:2687563/1‑93 (MQ=255)

                                      gatTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATcaacaa                                                   <  1:1193078/93‑1 (MQ=255)

                                       atTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACaaa                                                  >  1:4410488/1‑93 (MQ=255)

                                       atTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACaaa                                                  >  2:4222939/1‑93 (MQ=255)

                                       atTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACaaa                                                  <  2:4539263/93‑1 (MQ=255)

                                        ttATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACaaaa                                                 >  1:1478549/1‑93 (MQ=255)

                                        ttATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACaaaa                                                 >  1:3128117/1‑93 (MQ=255)

                                         tATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATcaacaacaa                                                >  1:500926/1‑93 (MQ=255)

                                         tATGGCCAACAGCGGCGCAACCAGAGGATGGTATCAAGACTTTCTGGAGGCGCCGGGTCAGCTCCGGGGTGGTTCACTCGTAATCAACaaaaa                                                >  2:672170/1‑93 (MQ=255)

                                          aTGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCaacaacaac                                               >  1:773611/1‑93 (MQ=255)

                                           tGGCCAACAGCGGCGCAACCAGTGTATGGTATCACGCCTTTCTGTAGGCGCCGGTTCAGCTCCGGGTTGGTTCGCTCGAAATCAACAAAAAcg                                              <  2:4068713/93‑2 (MQ=255)

                                           tGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACa                                              <  2:955877/93‑1 (MQ=255)

                                           tGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACa                                              <  2:3958591/93‑1 (MQ=255)

                                           tGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACa                                              <  2:898760/93‑1 (MQ=255)

                                             gCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATg                                            >  2:619312/1‑93 (MQ=255)

                                              ccAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGc                                           <  2:3295109/93‑1 (MQ=255)

                                              ccAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGc                                           <  1:323569/93‑1 (MQ=255)

                                               cAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCt                                          <  1:2890527/93‑1 (MQ=255)

                                               cAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCt                                          >  2:3103785/1‑93 (MQ=255)

                                               cAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCt                                          >  2:1992827/1‑93 (MQ=255)

                                                aaCAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTg                                         >  1:651230/1‑93 (MQ=255)

                                                aaCAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTg                                         >  2:3835297/1‑93 (MQ=255)

                                                 aCAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGt                                        <  2:2922801/93‑1 (MQ=255)

                                                 aCAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGt                                        <  2:3367518/93‑1 (MQ=255)

                                                   aGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTa                                      <  1:834671/93‑1 (MQ=255)

                                                    gcggcgCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTag                                     >  1:1593965/1‑92 (MQ=255)

                                                    gcggcgCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTAt                                     <  1:4067452/93‑1 (MQ=255)

                                                    gcggcgCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTAt                                     >  1:4579368/1‑93 (MQ=255)

                                                    gcggcgCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTAt                                     <  1:3844396/93‑1 (MQ=255)

                                                     cggcgCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATg                                    <  1:2872445/93‑1 (MQ=255)

                                                     cggcgCAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATg                                    <  1:2082561/93‑1 (MQ=255)

                                                          cAACCAGTGGATGTTATCACTACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATaa                               <  1:3346318/93‑1 (MQ=255)

                                                          cAACCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATaa                               >  1:3292228/1‑93 (MQ=255)

                                                           aaCCAGTGGATGGTATCACGAGTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATaaa                              >  2:957818/1‑93 (MQ=255)

                                                           aaCCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATaaa                              >  1:2190271/1‑93 (MQ=255)

                                                            aCCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAAt                             <  1:4499437/93‑1 (MQ=255)

                                                            aCCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAAt                             <  1:2239313/93‑1 (MQ=255)

                                                            aCCAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAAt                             <  2:126264/93‑1 (MQ=255)

                                                              cAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGa                           <  2:731271/93‑1 (MQ=255)

                                                              cAGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGa                           <  2:2610893/93‑1 (MQ=255)

                                                               aGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGAc                          >  1:341794/1‑93 (MQ=255)

                                                               aGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGAc                          <  1:1961366/93‑1 (MQ=255)

                                                               aGTGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGAc                          <  2:4364276/93‑1 (MQ=255)

                                                                 tGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGAcgc                        <  2:2819132/93‑1 (MQ=255)

                                                                 tGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGAcgc                        >  2:372685/1‑93 (MQ=255)

                                                                 tGGATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGAcgc                        <  1:4045065/93‑1 (MQ=255)

                                                                   gATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACgcgc                      >  2:2874317/1‑93 (MQ=255)

                                                                   gATGGTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGATGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACgcgc                      >  1:2513329/1‑93 (MQ=255)

                                                                      tgTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGa                   <  1:3994947/92‑1 (MQ=255)

                                                                      ggTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGa                   <  2:1960798/93‑1 (MQ=255)

                                                                      ggTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGa                   <  1:2349816/93‑1 (MQ=255)

                                                                       gTATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGAt                  <  1:463822/93‑1 (MQ=255)

                                                                        tATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATg                 <  1:3525428/93‑1 (MQ=255)

                                                                        tATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATg                 >  1:4609249/1‑93 (MQ=255)

                                                                        tATCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATg                 <  2:2265635/93‑1 (MQ=255)

                                                                          tCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGc               <  2:2148536/93‑1 (MQ=255)

                                                                          tCACGACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGc               <  2:2667313/93‑1 (MQ=255)

                                                                              gACTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTa           <  1:3689026/93‑1 (MQ=255)

                                                                                cTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTAtt         <  2:2454263/93‑1 (MQ=255)

                                                                                cTTTCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTAtt         >  2:487039/1‑93 (MQ=255)

                                                                                 tttCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTAttt        >  2:2070651/1‑93 (MQ=255)

                                                                                  ttCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTAtttt       <  2:2772754/93‑1 (MQ=255)

                                                                                  ttCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTAtttt       <  1:4147219/93‑1 (MQ=255)

                                                                                   tCTGGAGGCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTAttttt      <  2:381539/93‑1 (MQ=255)

                                                                                       gaggCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTATTTTTCCTg  <  2:4281475/93‑1 (MQ=255)

                                                                                       gaggCGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTATTTTTCCTg  <  1:2046167/93‑1 (MQ=255)

GGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGACGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTATTTTTCCTG  >  NC_000913/17528‑17707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`