BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,957,451	T→C	L140L (CTA→CTG)	b1875 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,957,451	0	T	C	100.0%	354.4 / NA	114	L140L (CTA→CTG)	b1875	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (53/61); total (53/61)

Only 100 of 120 total aligned reads displayed.

AGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCA  >  NC_000913/1957361‑1957540

aGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAg                                                                                         <  1:3453021/93‑1 (MQ=255)

 gttgttTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAgg                                                                                        >  1:1143194/1‑93 (MQ=255)

 gttgttTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAgg                                                                                        >  1:3912413/1‑93 (MQ=255)

  ttgttTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGc                                                                                       <  1:2372326/93‑1 (MQ=255)

    gttTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTg                                                                                     >  1:3833020/1‑93 (MQ=255)

     ttttGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGa                                                                                    >  2:1841655/1‑93 (MQ=255)

      tttGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAg                                                                                   <  1:343810/93‑1 (MQ=255)

      tttGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAg                                                                                   >  1:3616852/1‑93 (MQ=255)

       ttGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGt                                                                                  <  1:4264655/93‑1 (MQ=255)

         gCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTcc                                                                                >  2:4244001/1‑93 (MQ=255)

          ccATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCt                                                                               <  1:1747660/93‑1 (MQ=255)

          ccATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCt                                                                               >  1:1040081/1‑93 (MQ=255)

           cATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCtt                                                                              <  2:2321109/93‑1 (MQ=255)

           cATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCtt                                                                              >  2:4006998/1‑93 (MQ=255)

           cATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGGCCtt                                                                              >  2:3245742/1‑93 (MQ=255)

            aTCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtc                                                                             >  1:267757/1‑93 (MQ=255)

            aTCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtc                                                                             <  1:184906/93‑1 (MQ=255)

             tCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGCTCCCCGGCAGGCTGAGCCCCtcc                                                                            >  2:3787444/1‑92 (MQ=255)

             tCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtca                                                                            >  1:1917290/1‑93 (MQ=255)

             tCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtca                                                                            >  2:2810472/1‑93 (MQ=255)

             tCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtca                                                                            >  2:2271091/1‑93 (MQ=255)

             tCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtca                                                                            >  2:426818/1‑93 (MQ=255)

                gTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTtcatca                                                                         >  1:4359341/1‑93 (MQ=255)

                 tGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAg                                                                        <  1:4303627/93‑1 (MQ=255)

                 tGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAg                                                                        >  2:3046314/1‑93 (MQ=255)

                    ccGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGaaa                                                                     >  2:1579591/1‑93 (MQ=255)

                    ccGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGaaa                                                                     <  1:851662/93‑1 (MQ=255)

                      cccATCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGc                                                                   <  2:3914762/92‑1 (MQ=255)

                       ccAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCGGAGTCCTTCATCAGAAAGCa                                                                  <  2:4203600/93‑1 (MQ=255)

                        cAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCaa                                                                 <  1:2987200/93‑1 (MQ=255)

                        cAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCaa                                                                 <  2:2274351/93‑1 (MQ=255)

                        cAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCaa                                                                 <  2:2844905/93‑1 (MQ=255)

                         aGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAAt                                                                <  1:3213894/93‑1 (MQ=255)

                          gCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATg                                                               <  2:4083721/93‑1 (MQ=255)

                           cGTCGGATTCGGTAATCGCTTATGCTCACCTTTTGGCGAACTGGTTTTCAATGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGc                                                              <  2:4451361/93‑1 (MQ=255)

                            gTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGGACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAACAAGGcc                                                             >  1:3984356/1‑93 (MQ=255)

                            gTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAACGCAATGcc                                                             >  1:4508291/1‑93 (MQ=255)

                            gTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGcc                                                             >  2:1407972/1‑93 (MQ=255)

                            gTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGcc                                                             <  2:1863825/93‑1 (MQ=255)

                            gTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGcc                                                             >  2:1934284/1‑93 (MQ=255)

                            gTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGca                                                             >  2:1263009/1‑92 (MQ=255)

                               ggATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgc                                                          >  2:2232495/1‑93 (MQ=255)

                               ggATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgc                                                          <  2:1348941/93‑1 (MQ=255)

                                gATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGGTCCCCGGCAGGCTGAGGCCTTCATCAGAAAGGAATGCCAgcg                                                         >  1:3064341/1‑93 (MQ=255)

                                gATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgcg                                                         >  2:2787127/1‑93 (MQ=255)

                                gATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgcg                                                         >  1:172685/1‑93 (MQ=255)

                                gATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgcg                                                         >  1:2848036/1‑93 (MQ=255)

                                gATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAgcg                                                         >  1:1575206/1‑93 (MQ=255)

                                  ttCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCGTCAGAAAGCAATGCCAGCGCa                                                       <  1:4265815/93‑1 (MQ=255)

                                  ttCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCa                                                       <  2:3871996/93‑1 (MQ=255)

                                  ttCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCa                                                       >  2:468127/1‑93 (MQ=255)

                                  ttCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCa                                                       <  1:3201204/93‑1 (MQ=255)

                                  ttCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCa                                                       >  1:991337/1‑93 (MQ=255)

                                     ggTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCCGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACgg                                                    >  2:3220810/1‑93 (MQ=255)

                                       tAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGc                                                  >  1:2161067/1‑93 (MQ=255)

                                        aaTCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCa                                                 <  2:3386185/93‑1 (MQ=255)

                                         aTCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCAt                                                >  1:1507381/1‑93 (MQ=255)

                                         aTCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGCCCTTCATCAGAAAGCAATGCCAGCGCACGGGCAt                                                >  2:4535558/1‑93 (MQ=255)

                                            gCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCa                                             <  1:1719057/93‑1 (MQ=255)

                                            gCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCa                                             <  1:4441361/93‑1 (MQ=255)

                                                aTGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCAAGGGCATTCAGCGt                                         >  1:1766726/1‑93 (MQ=255)

                                                 tGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGtt                                        <  1:1162002/93‑1 (MQ=255)

                                                 tGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGtt                                        <  1:1745653/93‑1 (MQ=255)

                                                   cTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTc                                      >  1:2864539/1‑93 (MQ=255)

                                                    tCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCt                                     >  2:1375754/1‑93 (MQ=255)

                                                    tCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCt                                     <  1:4504614/93‑1 (MQ=255)

                                                    tCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGACCTTCATCAGAAAGCAATGCCAGCGCCCGGGCCTTCAGCGATTCt                                     >  1:2447509/1‑93 (MQ=255)

                                                      aCCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTgg                                   <  1:461491/93‑1 (MQ=255)

                                                       ccTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGa                                  <  1:3487851/93‑1 (MQ=255)

                                                       ccTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGa                                  <  2:3013620/93‑1 (MQ=255)

                                                         ttttGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATc                                >  2:4072904/1‑93 (MQ=255)

                                                            tGGCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCAcc                             <  1:3661500/93‑1 (MQ=255)

                                                              gCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCg                           >  2:367722/1‑93 (MQ=255)

                                                              gCGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCg                           <  2:4252777/93‑1 (MQ=255)

                                                               cGAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCgg                          <  2:2867975/93‑1 (MQ=255)

                                                                gAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGc                         <  2:3032467/93‑1 (MQ=255)

                                                                gAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGc                         <  1:3806524/93‑1 (MQ=255)

                                                                gAACTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGc                         <  2:2935078/93‑1 (MQ=255)

                                                                 aaCTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCa                        >  1:1291318/1‑93 (MQ=255)

                                                                 aaCTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCa                        <  1:3056148/93‑1 (MQ=255)

                                                                   cTGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGa                      <  2:1581504/93‑1 (MQ=255)

                                                                    tGGTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGaa                     <  2:1849979/93‑1 (MQ=255)

                                                                      gTTTTCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACg                   <  2:4130910/93‑1 (MQ=255)

                                                                       ttttCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGa                  >  1:2379239/1‑93 (MQ=255)

                                                                       ttttCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGa                  <  1:1563225/93‑1 (MQ=255)

                                                                       ttttCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGa                  <  2:1634217/93‑1 (MQ=255)

                                                                       ttttCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGa                  >  2:1620045/1‑93 (MQ=255)

                                                                        tttCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGAt                 >  1:2144663/1‑93 (MQ=255)

                                                                          tCACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGAttt               <  1:3134690/93‑1 (MQ=255)

                                                                           cACTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTc              <  2:4315243/93‑1 (MQ=255)

                                                                             cTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCaa            >  2:3602716/1‑93 (MQ=255)

                                                                             cTGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCaa            <  2:2147753/93‑1 (MQ=255)

                                                                              tGAGATCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAat           <  1:49146/93‑1 (MQ=255)

                                                                                 gaTCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATg        <  2:1103470/93‑1 (MQ=255)

                                                                                 gaTCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATg        <  1:2695177/93‑1 (MQ=255)

                                                                                  aTCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGt       <  2:3895081/93‑1 (MQ=255)

                                                                                   tCCCCGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGtt      >  2:658268/1‑93 (MQ=255)

                                                                                     cccGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTcc    >  1:1653406/1‑93 (MQ=255)

                                                                                       cGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCa  <  1:3469839/93‑1 (MQ=255)

                                                                                       cGGCAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCa  <  1:4534989/93‑1 (MQ=255)

AGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCA  >  NC_000913/1957361‑1957540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`