BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,990,664	A→G	S59S (AGT→AGC)	pgsA ←	phosphatidylglycerophosphate synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,990,664	0	A	G	100.0%	380.3 / NA	121	S59S (AGT→AGC)	pgsA	phosphatidylglycerophosphate synthetase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (77/44); total (77/44)

Only 100 of 125 total aligned reads displayed.

CCAGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCA  >  NC_000913/1990574‑1990753

 caGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGctt                                                                                        >  1:1249480/1‑92 (MQ=255)

 caGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGctt                                                                                        <  1:2095539/93‑2 (MQ=255)

 caGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGctt                                                                                        >  2:2426807/1‑92 (MQ=255)

   gCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTg                                                                                      >  2:1543987/1‑93 (MQ=255)

   gCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTg                                                                                      >  2:2997227/1‑93 (MQ=255)

     tgtgATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGt                                                                                    >  1:1836113/1‑93 (MQ=255)

       tgATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTc                                                                                  <  2:492378/93‑1 (MQ=255)

        gATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAATTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTcc                                                                                 >  1:2511668/1‑93 (MQ=255)

         aTAATGCTCGGTTATCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                >  2:3264725/1‑93 (MQ=255)

         aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTccg                                                                                >  2:1881561/1‑92 (MQ=255)

         aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                >  1:1803891/1‑93 (MQ=255)

         aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                <  1:1836045/93‑1 (MQ=255)

         aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                <  2:525136/93‑1 (MQ=255)

         aTAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCa                                                                                >  2:4493243/1‑93 (MQ=255)

          tAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAg                                                                               <  1:3088181/93‑1 (MQ=255)

           aaTGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgc                                                                              <  1:4417095/93‑1 (MQ=255)

             tGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcgg                                                                            <  1:3527651/93‑1 (MQ=255)

               cTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAgcggcg                                                                          <  2:2929655/93‑1 (MQ=255)

                   gTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGcc                                                                      >  1:804920/1‑93 (MQ=255)

                      aCCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCgaga                                                                   <  2:3111648/93‑1 (MQ=255)

                       ccAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaa                                                                  >  1:2084091/1‑93 (MQ=255)

                        cAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaaa                                                                 <  1:3036091/93‑1 (MQ=255)

                        cAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaaa                                                                 <  1:2350928/93‑1 (MQ=255)

                        cAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGaaa                                                                 >  1:776060/1‑93 (MQ=255)

                         aGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCAGCGTGCCAGaaaa                                                                >  1:4568516/1‑93 (MQ=255)

                          gCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAc                                                               >  2:4273081/1‑93 (MQ=255)

                          gCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAc                                                               >  2:1477408/1‑93 (MQ=255)

                          gCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAAc                                                               >  1:4241648/1‑93 (MQ=255)

                            aCCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCa                                                             >  2:163896/1‑93 (MQ=255)

                            aCCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCa                                                             <  1:289950/93‑1 (MQ=255)

                             ccATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGACAACCAt                                                            >  1:1741778/1‑93 (MQ=255)

                             ccATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCAt                                                            >  1:76431/1‑93 (MQ=255)

                             ccATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCAt                                                            >  1:3928160/1‑93 (MQ=255)

                              cATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATc                                                           >  1:930769/1‑93 (MQ=255)

                              cATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATc                                                           >  1:4051858/1‑93 (MQ=255)

                              cATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATc                                                           <  2:743020/93‑1 (MQ=255)

                                    gATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACca                                                     >  2:309357/1‑93 (MQ=255)

                                    gATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACca                                                     >  2:1440371/1‑93 (MQ=255)

                                    gATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACca                                                     >  2:1470101/1‑93 (MQ=255)

                                     aTAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcag                                                    <  2:1097457/93‑1 (MQ=255)

                                     aTAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcag                                                    <  1:3433836/93‑1 (MQ=255)

                                     aTAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcag                                                    >  1:3138708/1‑93 (MQ=255)

                                        gCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtca                                                 >  1:2381411/1‑93 (MQ=255)

                                        gCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtca                                                 >  2:2836740/1‑93 (MQ=255)

                                        gCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtca                                                 >  1:3163420/1‑93 (MQ=255)

                                          cACGAGAACTTTATCTGCCACAGGGTGAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               <  2:3793078/93‑1 (MQ=255)

                                          cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               <  2:2640658/93‑1 (MQ=255)

                                          cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               >  1:670810/1‑93 (MQ=255)

                                          cACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACcagtcagt                                               >  2:1443843/1‑93 (MQ=255)

                                           aCGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              >  1:4130889/1‑93 (MQ=255)

                                           aCGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              >  1:2733452/1‑93 (MQ=255)

                                           aCGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCagtcagtc                                              >  2:747339/1‑93 (MQ=255)

                                             gagaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            >  2:3443750/1‑93 (MQ=255)

                                             gagaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            >  2:198227/1‑93 (MQ=255)

                                             gagaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAc                                            >  2:4611333/1‑93 (MQ=255)

                                              agaACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAcc                                           <  2:503464/93‑1 (MQ=255)

                                                aaCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgc                                         >  2:464614/1‑93 (MQ=255)

                                                 aCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgcc                                        >  2:887939/1‑93 (MQ=255)

                                                 aCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgcc                                        >  2:3566711/1‑93 (MQ=255)

                                                 aCTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCAccgcc                                        >  1:1482740/1‑93 (MQ=255)

                                                   tttATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACcgccgc                                      >  2:2415845/1‑93 (MQ=255)

                                                   tttATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACcgccgc                                      >  2:3361728/1‑93 (MQ=255)

                                                     tATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGa                                    >  2:2233904/1‑93 (MQ=255)

                                                     tATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGa                                    <  1:1546810/93‑1 (MQ=255)

                                                       tCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACg                                  >  2:4003282/1‑93 (MQ=255)

                                                        cTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGc                                 <  1:2904778/93‑1 (MQ=255)

                                                         tGCCACAGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCa                                >  1:1916096/1‑93 (MQ=255)

                                                            cacaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaa                             >  2:3302757/1‑93 (MQ=255)

                                                             acaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaa                            >  1:1120805/1‑93 (MQ=255)

                                                             acaGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGACGCGACGCAGaca                            >  2:874321/1‑91 (MQ=255)

                                                              caGGGTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGaaaa                           <  1:4648137/93‑1 (MQ=255)

                                                                gggTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATg                         <  1:3232737/93‑1 (MQ=255)

                                                                gggCCAAGAAAACCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATg                         <  2:2078705/93‑1 (MQ=255)

                                                                  gTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAg                       <  2:2629612/93‑1 (MQ=255)

                                                                  gTCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAg                       <  1:2991439/93‑1 (MQ=255)

                                                                   tCAAGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgc                      >  1:987558/1‑93 (MQ=255)

                                                                     aaGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgcgc                    >  1:3749858/1‑93 (MQ=255)

                                                                     aaGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAgcgc                    >  1:1370688/1‑93 (MQ=255)

                                                                      aGGAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGcgcg                   >  2:1517577/1‑93 (MQ=255)

                                                                       ggAAAGCACCAAACAGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcgg                  >  1:511577/1‑93 (MQ=255)

                                                                        gAAAGCACCAACCCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcggc                 <  1:1713867/93‑1 (MQ=255)

                                                                        gAAAGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCgcggc                 <  1:1602207/93‑1 (MQ=255)

                                                                          aaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGTACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGcggcgg               <  1:2515856/93‑1 (MQ=255)

                                                                          aaGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGcggcgg               >  2:3753321/1‑93 (MQ=255)

                                                                           aGCACCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCggcggc              <  1:3575717/93‑1 (MQ=255)

                                                                              aCCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaaa           >  1:390113/1‑93 (MQ=255)

                                                                              aCCAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCaaa           >  2:675953/1‑93 (MQ=255)

                                                                               ccAACCCGGGTGCTTTGATTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCCCCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          <  2:557182/93‑1 (MQ=255)

                                                                               ccAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          <  2:4329014/93‑1 (MQ=255)

                                                                               ccAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          <  2:2815107/93‑1 (MQ=255)

                                                                               ccAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          >  1:4475995/1‑93 (MQ=255)

                                                                               ccAAACCGCGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAAc          <  2:3459635/93‑1 (MQ=255)

                                                                                cAAACCGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACg         <  2:1776132/93‑1 (MQ=255)

                                                                                 aacccGGGTGCTTTGGTTCCAGCGGCGTGCCAAAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACgg        <  1:439678/90‑1 (MQ=255)

                                                                                 aaaCGGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCCCCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACgg        <  2:59033/93‑1 (MQ=255)

                                                                                 aaaCCGGGTGCTTTGGTTCCAGCGGCGTCCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACgg        >  1:3693415/1‑93 (MQ=255)

                                                                                    ccGGGTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGa     >  1:928043/1‑93 (MQ=255)

                                                                                    ccGGGAGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGTACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGAAAACGGCGa     >  2:602729/1‑93 (MQ=255)

                                                                                      gggTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCCGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGAcc   >  2:3740108/1‑93 (MQ=255)

                                                                                      gggTGCTTTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGAcc   >  1:253397/1‑93 (MQ=255)

CCAGCTGTGATAATGCTCGGTTACCAGCACCATGGCGATAGCCACGAGAACTTTATCTGCCACAGGGTCAAGGAAAGCACCAAACCGGGTACTCTGGTTCCAGCGGCGTGCCAGAAAACCATCGAACCAGTCAGTCACCGCCGCGACGCAGAAAATGAGCGCGGCGGCAAACGGCGACCA  >  NC_000913/1990574‑1990753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`