BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	200,585	A→G	Q35R (CAG→CGG)	hlpA →	histone‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	200,585	0	A	G	100.0%	575.2 / NA	181	Q35R (CAG→CGG)	hlpA	histone‑like protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (93/88); total (93/88)

Only 100 of 194 total aligned reads displayed.

TATTAGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCAGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCTGC  >  NC_000913/200495‑200674

tattaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCggg                                                                                         <  1:3339161/93‑1 (MQ=255)

tattaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCggg                                                                                         <  1:4036718/93‑1 (MQ=255)

tattaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCggg                                                                                         >  2:4268714/1‑93 (MQ=255)

  ttaGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTa                                                                                       >  1:2820310/1‑93 (MQ=255)

    aGCTGCAGGTCTCGGTCTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAgc                                                                                     <  2:3507067/93‑1 (MQ=255)

     gCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAgcg                                                                                    >  1:3410328/1‑93 (MQ=255)

       tGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCa                                                                                  >  2:2935079/1‑93 (MQ=255)

        gCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAg                                                                                 >  2:1365666/1‑93 (MQ=255)

        gCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAg                                                                                 <  2:2735403/93‑1 (MQ=255)

          aGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaa                                                                               >  2:2549680/1‑93 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             <  1:3466285/93‑1 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             >  1:48934/1‑93 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             <  2:1134903/93‑1 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             >  2:640889/1‑93 (MQ=255)

            gTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGaaaa                                                                             >  1:1082557/1‑93 (MQ=255)

             tctcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAc                                                                            >  1:2415442/1‑93 (MQ=255)

             tctcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAc                                                                            <  1:3974743/93‑1 (MQ=255)

              ctcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAcc                                                                           <  1:1141611/93‑1 (MQ=255)

               tcGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAAcag                                                                          >  2:2326449/1‑91 (MQ=255)

                cGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCgg                                                                         >  2:878315/1‑93 (MQ=255)

                cGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCgg                                                                         >  1:1559736/1‑93 (MQ=255)

                 ggTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgt                                                                        <  1:1203423/93‑1 (MQ=255)

                  gTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAGATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgtg                                                                       >  2:3315819/1‑93 (MQ=255)

                  gTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgtg                                                                       <  2:1566263/93‑1 (MQ=255)

                   tttAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgtgt                                                                      >  1:184374/1‑93 (MQ=255)

                   tttAGCACTGGCAACTTCTCCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGgtgt                                                                      <  1:2998938/93‑1 (MQ=255)

                    ttAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGtt                                                                     >  1:1426455/1‑93 (MQ=255)

                     tAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGttt                                                                    >  2:802953/1‑93 (MQ=255)

                      aGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTc                                                                   <  1:54753/93‑1 (MQ=255)

                      aGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTc                                                                   <  2:3820184/93‑1 (MQ=255)

                      aGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTc                                                                   <  2:3963880/93‑1 (MQ=255)

                       gCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCt                                                                  >  1:1045276/1‑93 (MQ=255)

                       gCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCt                                                                  >  1:3145071/1‑93 (MQ=255)

                        cACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGGTTCTa                                                                 >  1:3571893/1‑93 (MQ=255)

                         aCTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTaa                                                                >  1:3994013/1‑93 (MQ=255)

                           tGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAaca                                                              >  1:2659486/1‑93 (MQ=255)

                            ggCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAacac                                                             >  2:2835683/1‑93 (MQ=255)

                              cAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGc                                                           <  2:923374/93‑1 (MQ=255)

                              cAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGc                                                           <  1:4591007/93‑1 (MQ=255)

                               aaCTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCt                                                          >  2:2484184/1‑93 (MQ=255)

                               aaCTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCt                                                          <  1:2018997/93‑1 (MQ=255)

                               aaCTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCt                                                          >  2:2205984/1‑93 (MQ=255)

                                aCTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTg                                                         <  1:16630/93‑1 (MQ=255)

                                 cTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTgg                                                        <  2:1953762/93‑1 (MQ=255)

                                  ttCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGa                                                       <  1:4533180/93‑1 (MQ=255)

                                   tCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGaa                                                      <  2:703417/93‑1 (MQ=255)

                                   tCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGaa                                                      <  2:1768582/93‑1 (MQ=255)

                                     tGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGaaaa                                                    <  1:4181253/93‑1 (MQ=255)

                                      gcgcAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAAt                                                   <  1:4392414/90‑1 (MQ=255)

                                      gCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAAt                                                   <  1:2324793/93‑1 (MQ=255)

                                       cTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATg                                                  <  2:735806/93‑1 (MQ=255)

                                       cTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATg                                                  >  1:916500/1‑93 (MQ=255)

                                       cTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATg                                                  <  2:499738/93‑1 (MQ=255)

                                        tCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGa                                                 >  2:4539902/1‑93 (MQ=255)

                                        tCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGa                                                 >  1:1590735/1‑93 (MQ=255)

                                          aGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGt                                               >  2:3041591/1‑93 (MQ=255)

                                           ggcggcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGtt                                              <  1:2692979/93‑1 (MQ=255)

                                            gcggcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTc                                             <  1:3087717/93‑1 (MQ=255)

                                              ggcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCaa                                           >  2:1645899/1‑93 (MQ=255)

                                               gcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCaaa                                          <  2:1025732/93‑1 (MQ=255)

                                               gcTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCaaa                                          <  2:4194957/93‑1 (MQ=255)

                                                cTGACAAAATTGAAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAg                                         <  2:553241/93‑1 (MQ=255)

                                                 tGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAgg                                        >  1:4442303/1‑93 (MQ=255)

                                                  gACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGc                                       >  1:3852617/1‑93 (MQ=255)

                                                   aCAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGcc                                      >  1:3782307/1‑93 (MQ=255)

                                                    aaaaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCg                                     <  1:3702263/92‑1 (MQ=255)

                                                     aaaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGt                                    >  2:4654580/1‑93 (MQ=255)

                                                     aaaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGt                                    >  2:401034/1‑93 (MQ=255)

                                                     aaaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGt                                    >  1:323178/1‑93 (MQ=255)

                                                     aaaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGt                                    <  2:319715/93‑1 (MQ=255)

                                                     aaaaTTGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGGAGCGCAGGAAAACGGGGGTTCTTACACGCTGGGAAATGAGGTCAAAGGGCgg                                    >  2:2828624/1‑92 (MQ=255)

                                                         ttGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCa                                >  1:150687/1‑93 (MQ=255)

                                                          tGCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAg                               <  2:1984314/93‑1 (MQ=255)

                                                           gCAATCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGc                              <  2:4231733/93‑1 (MQ=255)

                                                             aaTCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGa                            >  1:3747284/1‑93 (MQ=255)

                                                             aaTCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGa                            >  2:3576705/1‑93 (MQ=255)

                                                              aTCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGaa                           >  1:3568040/1‑93 (MQ=255)

                                                              aTCGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGaa                           <  1:2592045/93‑1 (MQ=255)

                                                                cGTCAACATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACt                         <  2:3421344/93‑1 (MQ=255)

                                                                    aaCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAg                     >  1:4206220/1‑93 (MQ=255)

                                                                     aCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGc                    >  1:2449177/1‑93 (MQ=255)

                                                                     aCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGc                    <  2:2369533/93‑1 (MQ=255)

                                                                     aCATGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGc                    <  1:3119947/93‑1 (MQ=255)

                                                                        tGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCgca                 <  2:3789408/93‑3 (MQ=255)

                                                                        tGGGCAGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCgca                 >  1:2740506/1‑91 (MQ=255)

                                                                             aGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGaa            >  1:2475917/1‑93 (MQ=255)

                                                                             aGCCTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGaa            >  1:1010699/1‑93 (MQ=255)

                                                                              gCCTGTTCCAGCGGGTAGCGCAGACAACCGCTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGaaa           <  1:2309518/93‑1 (MQ=255)

                                                                              accTGTTCCAGCGGGTAGCGCAGAAACCCGGTGTTTCTAACACGCTGAAAAATGAGTTAAAAGCCCGTGCAAGCGAACTGCAGCGCATGGaaa           <  2:1232160/92‑1 (MQ=255)

                                                                              accTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGaaa           <  2:1448132/92‑1 (MQ=255)

                                                                               ccTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAAc          <  1:875814/93‑1 (MQ=255)

                                                                               ccTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAAc          <  1:4251697/93‑1 (MQ=255)

                                                                               ccTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAAc          <  1:2565690/93‑1 (MQ=255)

                                                                                cTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAAcc         >  2:1905225/1‑93 (MQ=255)

                                                                                cTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAAcc         >  1:1851294/1‑93 (MQ=255)

                                                                                cTGTTCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAAcc         >  1:4655865/1‑93 (MQ=255)

                                                                                   ggtcagcggGGAGCGCAGAAAGCCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGAt      <  2:2100852/90‑1 (MQ=255)

                                                                                    tCCAGCGGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGATc     >  1:776955/1‑93 (MQ=255)

                                                                                       agcggGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGATCTGc  <  2:4293134/93‑1 (MQ=255)

                                                                                       agcggGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGCATGGAAACCGATCTGc  <  1:564666/93‑1 (MQ=255)

TATTAGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCAGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCTGC  >  NC_000913/200495‑200674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`