BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,045,049	T→C	V722A (GTC→GCC)	b1978 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,045,049	0	T	C	100.0%	561.1 / NA	176	V722A (GTC→GCC)	b1978	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (91/85); total (91/85)

Only 100 of 179 total aligned reads displayed.

AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATAC  >  NC_000913/2044959‑2045136

 ggAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCta                                                                                      >  1:3632590/1‑93 (MQ=255)

 ggAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCta                                                                                      >  1:2897010/1‑93 (MQ=255)

  gAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCtat                                                                                     >  1:491862/1‑93 (MQ=255)

  gAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCtat                                                                                     >  1:2065545/1‑93 (MQ=255)

    aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa                                                                                   <  1:1275601/93‑1 (MQ=255)

    aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa                                                                                   <  1:1580109/93‑1 (MQ=255)

    aCAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATaa                                                                                   <  1:2548790/93‑1 (MQ=255)

     cAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTGACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAg                                                                                  >  2:2848509/1‑93 (MQ=255)

     cAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAg                                                                                  <  2:493075/93‑1 (MQ=255)

     cAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAg                                                                                  >  2:3688379/1‑93 (MQ=255)

     cAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAg                                                                                  <  2:3519502/93‑1 (MQ=255)

      aaaaaCAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAgg                                                                                 >  2:1214639/1‑93 (MQ=255)

         aaCAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGa                                                                              <  2:263484/93‑1 (MQ=255)

             gCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCta                                                                          >  2:785669/1‑93 (MQ=255)

                aCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAc                                                                       <  1:3922324/93‑1 (MQ=255)

                aCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAc                                                                       >  1:4205697/1‑93 (MQ=255)

                aCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAc                                                                       <  2:963520/93‑1 (MQ=255)

                aCTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAc                                                                       >  2:365826/1‑93 (MQ=255)

                 cTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAcc                                                                      <  2:2204468/93‑1 (MQ=255)

                 cTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAcc                                                                      <  1:1176542/93‑1 (MQ=255)

                 cTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATAcc                                                                      <  1:3215908/93‑1 (MQ=255)

                     aTAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCt                                                                  >  1:1633549/1‑93 (MQ=255)

                      tAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCta                                                                 >  2:2566275/1‑93 (MQ=255)

                      tAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCta                                                                 >  2:3743574/1‑93 (MQ=255)

                      tAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCta                                                                 <  1:1132978/93‑1 (MQ=255)

                       aaCGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCtat                                                                >  2:2758694/1‑93 (MQ=255)

                        aCGCAGTCAGCATCGCCAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCtata                                                               <  2:4136187/93‑1 (MQ=255)

                        aCGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCtata                                                               >  2:1487568/1‑93 (MQ=255)

                         cGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATAc                                                              <  2:3205484/93‑1 (MQ=255)

                         cGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATAc                                                              >  2:2594028/1‑93 (MQ=255)

                          gCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATAcc                                                             >  1:2252533/1‑93 (MQ=255)

                             gTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCaaa                                                          >  1:535897/1‑93 (MQ=255)

                             gTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCaaa                                                          >  1:733424/1‑93 (MQ=255)

                              tCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAg                                                         <  2:494521/93‑1 (MQ=255)

                              tCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAg                                                         >  1:1208470/1‑93 (MQ=255)

                               cAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAgg                                                        <  2:1139089/93‑1 (MQ=255)

                                aGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGc                                                       <  2:1433899/93‑1 (MQ=255)

                                 gCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAACCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCa                                                      <  1:4114972/93‑1 (MQ=255)

                                 gCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCa                                                      <  1:3900236/93‑1 (MQ=255)

                                 gCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCa                                                      >  1:2005289/1‑93 (MQ=255)

                                 gCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCa                                                      >  2:2716943/1‑93 (MQ=255)

                                   aTCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGt                                                    >  1:2180419/1‑93 (MQ=255)

                                   aTCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGt                                                    <  1:83340/93‑1 (MQ=255)

                                     cGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTgg                                                  >  1:3061744/1‑93 (MQ=255)

                                     cGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTgg                                                  <  1:3817116/93‑1 (MQ=255)

                                      gACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGa                                                 <  2:3277054/93‑1 (MQ=255)

                                      gACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGa                                                 >  2:163968/1‑93 (MQ=255)

                                       aCAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGAc                                                <  1:4315215/93‑1 (MQ=255)

                                       aCAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGAc                                                >  2:2683516/1‑93 (MQ=255)

                                       aCAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAAGCGACCTATACCGCCTATACCAAAGGCAGTGGAc                                                >  2:422399/1‑93 (MQ=255)

                                         aaCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACtt                                              >  2:3687702/1‑93 (MQ=255)

                                         aaCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACtt                                              >  2:2503105/1‑93 (MQ=255)

                                          aCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTa                                             <  1:1116800/93‑1 (MQ=255)

                                          aCGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTa                                             <  1:3761485/93‑1 (MQ=255)

                                               aaaCCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCg                                        <  2:2435187/93‑1 (MQ=255)

                                                aaCCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGa                                       >  1:3013689/1‑93 (MQ=255)

                                                 aCCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGaa                                      <  1:2136901/93‑1 (MQ=255)

                                                 aCCAGCAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGaa                                      <  1:2325642/93‑1 (MQ=255)

                                                  ccAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAg                                     >  2:2423180/1‑93 (MQ=255)

                                                  ccAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAg                                     >  2:4516404/1‑93 (MQ=255)

                                                   cAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGc                                    >  1:2736402/1‑93 (MQ=255)

                                                   cAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGc                                    >  2:2746484/1‑93 (MQ=255)

                                                    aGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCt                                   <  1:780810/93‑1 (MQ=255)

                                                     ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa                                  <  1:1443303/93‑1 (MQ=255)

                                                     ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa                                  >  1:1120280/1‑93 (MQ=255)

                                                     ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa                                  >  2:18341/1‑93 (MQ=255)

                                                     ggAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTa                                  <  2:1076703/93‑1 (MQ=255)

                                                      gAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAt                                 <  1:328838/93‑1 (MQ=255)

                                                      gAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAt                                 <  1:3106383/93‑1 (MQ=255)

                                                      gAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAt                                 <  1:199604/93‑1 (MQ=255)

                                                       aGTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTGTACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTAtt                                <  1:3297090/93‑1 (MQ=255)

                                                        gTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTa                               >  1:1204838/1‑93 (MQ=255)

                                                        gTCACTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTa                               >  2:3381934/1‑93 (MQ=255)

                                                           aCTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACTTATCCCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATg                            <  1:2527122/93‑1 (MQ=255)

                                                           aCTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATg                            >  1:2091009/1‑93 (MQ=255)

                                                            cTACAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGc                           >  2:489383/1‑93 (MQ=255)

                                                               cAGACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCaaa                        <  1:2553001/93‑1 (MQ=255)

                                                                 gACTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAAc                      <  2:2485575/93‑1 (MQ=255)

                                                                  aCTGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACt                     >  1:60422/1‑93 (MQ=255)

                                                                    tGGAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTgg                   >  1:3435527/1‑93 (MQ=255)

                                                                     ggAAAGAAACCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGa                  >  2:19666/1‑93 (MQ=255)

                                                                      gaaagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGaa                 >  1:1927611/1‑93 (MQ=255)

                                                                       aaagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAAt                <  2:635885/93‑1 (MQ=255)

                                                                        aagaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATg               >  2:3870581/1‑93 (MQ=255)

                                                                         agaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGa              >  2:2400485/1‑93 (MQ=255)

                                                                         agaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGa              >  1:2951220/1‑93 (MQ=255)

                                                                         agaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGa              <  2:305357/93‑1 (MQ=255)

                                                                          gaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGaa             <  1:175360/93‑1 (MQ=255)

                                                                          gaaaCCGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGaa             <  2:4430980/93‑1 (MQ=255)

                                                                           aagccGCAGATGGCGCCTATAAGGCGGCCTATACCGCCTATACCAAAGGCAGTGCACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAg            <  2:1103881/90‑1 (MQ=255)

                                                                              ccGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt         <  2:3470877/93‑1 (MQ=255)

                                                                              ccGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt         >  2:2096729/1‑93 (MQ=255)

                                                                              ccGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt         <  1:4497876/93‑1 (MQ=255)

                                                                              ccGCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGAtt         >  1:3177924/1‑93 (MQ=255)

                                                                                gCAGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTg       >  1:1563536/1‑93 (MQ=255)

                                                                                  aGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCa     <  1:1682030/93‑1 (MQ=255)

                                                                                  aGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCa     <  1:546600/93‑1 (MQ=255)

                                                                                  aGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCa     <  2:1462031/93‑1 (MQ=255)

                                                                                  aGATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCa     <  1:664883/93‑1 (MQ=255)

                                                                                   gATGGCGCCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCAt    >  2:3925006/1‑93 (MQ=255)

AGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATAC  >  NC_000913/2044959‑2045136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`