BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	18,885	A→G	G57G (GGA→GGG)	nhaR →	NhaR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	18,885	0	A	G	100.0%	556.6 / NA	177	G57G (GGA→GGG)	nhaR	NhaR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (97/80); total (97/80)

Only 100 of 189 total aligned reads displayed.

GAGGCGCTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGACGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTGGATATTGT  >  NC_000913/18796‑18974

gAGGCGCTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCgg                                                                                        >  1:3096362/1‑92 (MQ=255)

  ggCGCTTTATTTAACTCCGCAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTgg                                                                                      >  1:806845/1‑93 (MQ=255)

  ggCGCTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTgg                                                                                      >  1:3645780/1‑93 (MQ=255)

  ggCGCTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTgg                                                                                      >  2:4066596/1‑93 (MQ=255)

  ggCGCTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTgg                                                                                      >  1:9612/1‑93 (MQ=255)

    cgcTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGtc                                                                                    <  1:3010398/93‑1 (MQ=255)

     gcTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGtct                                                                                   >  1:2260082/1‑93 (MQ=255)

      cTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGtctc                                                                                  >  2:2408394/1‑93 (MQ=255)

       tttatttaACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCg                                                                                 >  2:707701/1‑93 (MQ=255)

        ttatttaACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGa                                                                                >  1:4104405/1‑93 (MQ=255)

         tatttaACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGaa                                                                               >  1:1373682/1‑93 (MQ=255)

         tatttaACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGaa                                                                               >  2:3022255/1‑93 (MQ=255)

          atttaACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAAc                                                                              >  1:4244201/1‑93 (MQ=255)

           tttaACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAAcc                                                                             >  2:848842/1‑93 (MQ=255)

            ttaACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAAccc                                                                            <  2:2075715/93‑1 (MQ=255)

              aaCTCCACTAACCATTACCTGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAg                                                                          >  2:4582892/1‑93 (MQ=255)

              aaCTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAg                                                                          >  2:3584675/1‑93 (MQ=255)

                cTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCg                                                                        >  2:2898955/1‑93 (MQ=255)

                  ccACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAg                                                                      >  2:3668941/1‑93 (MQ=255)

                   cacaAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGc                                                                     <  2:2962602/93‑1 (MQ=255)

                   cacaAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGc                                                                     >  1:2430041/1‑93 (MQ=255)

                    acaAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCt                                                                    >  2:2180148/1‑93 (MQ=255)

                    acaAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCt                                                                    <  2:3223809/93‑1 (MQ=255)

                     caAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTg                                                                   >  2:2040898/1‑93 (MQ=255)

                      aaaCCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTgg                                                                  <  2:1014689/93‑1 (MQ=255)

                      aaaCCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTgg                                                                  >  2:311734/1‑93 (MQ=255)

                       aaCCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTggg                                                                 >  2:1514471/1‑93 (MQ=255)

                         ccATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGgag                                                               >  2:1572844/1‑93 (MQ=255)

                          cATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGgaga                                                              >  1:2919292/1‑93 (MQ=255)

                           aTTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGaa                                                             <  2:3369863/93‑1 (MQ=255)

                           aTTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGaa                                                             <  2:2712278/93‑1 (MQ=255)

                           aTTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGaa                                                             <  1:3637477/93‑1 (MQ=255)

                            ttACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAAc                                                            >  1:374440/1‑93 (MQ=255)

                            ttACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAAc                                                            >  2:532927/1‑93 (MQ=255)

                            ttACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAAc                                                            <  2:4478463/93‑1 (MQ=255)

                            ttACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAAc                                                            <  1:1675846/93‑1 (MQ=255)

                             tACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACt                                                           >  1:745421/1‑93 (MQ=255)

                              aCCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTg                                                          >  1:2466340/1‑93 (MQ=255)

                                cGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGt                                                        <  1:4116603/93‑1 (MQ=255)

                                cGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGt                                                        >  1:1418149/1‑93 (MQ=255)

                                 ggACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTc                                                       >  2:3783535/1‑93 (MQ=255)

                                 ggACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTc                                                       <  2:1395672/93‑1 (MQ=255)

                                 ggACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTc                                                       <  1:1608629/93‑1 (MQ=255)

                                  gACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCt                                                      >  2:3522327/1‑93 (MQ=255)

                                  gACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCt                                                      >  2:205771/1‑93 (MQ=255)

                                   aCAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTa                                                     <  1:1958521/93‑1 (MQ=255)

                                    cAGATTCGTGCGTTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGTCGTGGTCTCGAACCCACCGAGCTGGGAGAACAGTTCTAt                                                    >  2:4204978/1‑93 (MQ=255)

                                    cAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTAt                                                    <  2:3308007/93‑1 (MQ=255)

                                     aGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATc                                                   <  1:2032760/93‑1 (MQ=255)

                                     aGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATc                                                   >  2:2994544/1‑93 (MQ=255)

                                      gATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCg                                                  <  2:1187193/93‑1 (MQ=255)

                                      gATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCg                                                  >  1:3974456/1‑93 (MQ=255)

                                      gATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCg                                                  >  2:322177/1‑93 (MQ=255)

                                       aTTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGCCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGc                                                 >  1:2712041/1‑93 (MQ=255)

                                         tCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTa                                               <  1:3788401/93‑1 (MQ=255)

                                          cGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTAt                                              <  1:506300/93‑1 (MQ=255)

                                           gAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATg                                             <  2:2767926/93‑1 (MQ=255)

                                             gcgcTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGcc                                           >  1:1967861/1‑93 (MQ=255)

                                              cgcTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCg                                          <  1:2842847/93‑1 (MQ=255)

                                                  ggAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATaa                                      >  2:2440716/1‑93 (MQ=255)

                                                  ggAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATaa                                      >  2:3954032/1‑93 (MQ=255)

                                                  ggAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATaa                                      >  2:4554696/1‑93 (MQ=255)

                                                   gAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATaaa                                     <  1:247070/93‑1 (MQ=255)

                                                   gAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATaaa                                     >  1:2456971/1‑93 (MQ=255)

                                                    aaGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATaaaa                                    >  1:3753313/1‑93 (MQ=255)

                                                     agagCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAGCCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAAt                                   <  2:1559039/93‑1 (MQ=255)

                                                      gagCGCCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATg                                  >  1:3696917/1‑93 (MQ=255)

                                                         cgcCTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTc                               <  1:3454669/93‑1 (MQ=255)

                                                            cTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCAcc                            <  2:4260798/93‑1 (MQ=255)

                                                            cTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCAcc                            >  2:333820/1‑93 (MQ=255)

                                                            cTGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCAcc                            <  2:1658068/93‑1 (MQ=255)

                                                             tGCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCt                           <  2:4622961/93‑1 (MQ=255)

                                                              gCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCtt                          >  2:2915812/1‑93 (MQ=255)

                                                              gCAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCtt                          <  1:4610487/93‑1 (MQ=255)

                                                               cAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTa                         <  1:1491073/93‑1 (MQ=255)

                                                               cAAGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTa                         <  1:2068439/93‑1 (MQ=255)

                                                                aaGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATATAATGTTCACCTTaa                        >  2:220477/1‑93 (MQ=255)

                                                                aaGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTaa                        <  1:2108133/93‑1 (MQ=255)

                                                                aaGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCGATGCCGATAAAATGTTCACCTTaa                        >  2:4597392/1‑93 (MQ=255)

                                                                 aGGCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATCCCGATAAAATTTTCACCTTAAg                       >  2:903485/1‑93 (MQ=255)

                                                                  ggCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGc                      >  1:1446445/1‑93 (MQ=255)

                                                                   gCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGcc                     <  1:1237843/93‑1 (MQ=255)

                                                                   gCAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGcc                     >  1:3528829/1‑93 (MQ=255)

                                                                    cAAATTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCa                    >  1:1174109/1‑93 (MQ=255)

                                                                     aaaTTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTCAGCCAg                   >  2:4008231/1‑93 (MQ=255)

                                                                     aaaTTATTTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAg                   >  2:1125262/1‑93 (MQ=255)

                                                                       attattTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGa                 >  2:578109/1‑93 (MQ=255)

                                                                         tattTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGaaa               <  2:3855327/93‑1 (MQ=255)

                                                                         tattTAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGaaa               <  1:3888576/93‑1 (MQ=255)

                                                                           tttAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATg             <  2:3083873/93‑1 (MQ=255)

                                                                           tttAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATg             <  1:3287146/93‑1 (MQ=255)

                                                                             tAAACGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCt           <  2:2849999/93‑1 (MQ=255)

                                                                              aaaCGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTg          <  1:1168830/93‑1 (MQ=255)

                                                                              aaaCGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTg          >  2:4659135/1‑93 (MQ=255)

                                                                              aaaCGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTg          <  1:446730/93‑1 (MQ=255)

                                                                              aaaCGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTg          <  2:3137260/93‑1 (MQ=255)

                                                                                aCGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTGGa        <  2:469352/93‑1 (MQ=255)

                                                                                 cGCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTGGat       >  1:4352532/1‑93 (MQ=255)

                                                                                  gCAAGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTGGata      >  1:2373854/1‑93 (MQ=255)

                                                                                     aGGGGCGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTGGATATtg   <  2:3720102/93‑1 (MQ=255)

GAGGCGCTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGACGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTGGATATTGT  >  NC_000913/18796‑18974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`