| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,222,925 | T→C | intergenic (‑26/+139) | pbpG ← / ← yohC | penicillin‑binding protein 7/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,222,925 | 0 | T | C | 96.5% | 413.8 / 1.1 | 143 | intergenic (‑26/+139) | pbpG/yohC | penicillin‑binding protein 7/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (2/3); new base C (73/64); total (76/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 150 total aligned reads displayed.
AAAGGCACAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGT > NC_000913/2222835‑2223008 | aaaGGCACAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTg > 1:3337952/1‑93 (MQ=255) aGGCACAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTgcg > 2:582512/1‑93 (MQ=255) gccagcATCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCAccgcc > 1:89094/1‑93 (MQ=255) gccagcATCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCAccgcc > 2:1410718/1‑93 (MQ=255) cggcATCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCgg > 2:4616157/3‑93 (MQ=255) gcATCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAg > 2:1235369/1‑93 (MQ=255) aTCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTa > 2:3897413/1‑93 (MQ=255) tCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTaa > 1:508281/1‑93 (MQ=255) tCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTaa > 1:1376897/1‑93 (MQ=255) tCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTaa > 2:2266098/1‑93 (MQ=255) gggCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGTGCACCGCCGGAGTAAGGa > 1:3023280/1‑93 (MQ=255) ggCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGAt < 1:4572350/93‑1 (MQ=255) gtaGGCTAAATAAAGAAACTCGAAATTGCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGAttt < 1:102982/91‑1 (MQ=255) cAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTa > 2:3175902/1‑93 (MQ=255) cAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCAACGCCGGAGGAAGGATTTa > 2:756480/1‑93 (MQ=255) cAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGATCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTa > 2:410279/1‑93 (MQ=255) aGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTAc < 2:3470527/93‑1 (MQ=255) aGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTAc < 1:1204769/93‑1 (MQ=255) ggCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACt < 1:3982479/93‑1 (MQ=255) ggCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACt > 1:3966466/1‑93 (MQ=255) ggCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACt > 1:2759282/1‑93 (MQ=255) ggCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACt > 1:2800550/1‑93 (MQ=255) taaataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAg > 2:4160016/1‑93 (MQ=255) taaataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGAGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAg > 1:663515/1‑93 (MQ=255) aataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGc < 2:4342457/93‑1 (MQ=255) aataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGc > 1:3408813/1‑93 (MQ=255) aataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGc < 2:425086/93‑1 (MQ=255) aataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGc < 2:1938564/93‑1 (MQ=255) aataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGGAAGGATTTACTGAGGc > 2:470589/1‑93 (MQ=255) ataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCt > 1:1781037/1‑93 (MQ=255) ataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCt < 1:4254485/93‑1 (MQ=255) ataaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCt > 1:4357210/1‑93 (MQ=255) taaaGACCCTCGAAATCTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCGCCGCCGGAGTAAGGATTTACTGAGGCTa < 2:3334828/93‑1 (MQ=255) taaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTa < 2:1451353/93‑1 (MQ=255) taaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTa < 2:847721/93‑1 (MQ=255) aaaGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAg < 1:1433989/93‑1 (MQ=255) aaaGAAACACGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAg < 1:1200869/93‑1 (MQ=255) gAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGa > 2:3136842/1‑93 (MQ=255) gAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGa > 2:1870776/1‑93 (MQ=255) gAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGa < 2:1549864/93‑1 (MQ=255) gAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGa > 1:3125716/1‑93 (MQ=255) aaaCTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGAc < 1:1472257/93‑1 (MQ=255) aaCTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACg > 2:291498/1‑93 (MQ=255) aaCTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACg > 2:658728/1‑93 (MQ=255) aaCTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACg > 1:3204314/1‑93 (MQ=255) tCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCca > 2:1988061/1‑93 (MQ=255) tCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCca < 2:3544915/93‑1 (MQ=255) cGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCcat < 2:3039808/93‑1 (MQ=255) gAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCcatc > 2:1820106/1‑93 (MQ=255) gAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCcatc < 1:698642/93‑1 (MQ=255) aaaTTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCcatca < 2:3273817/93‑1 (MQ=255) aaaTTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCcatca < 2:2460326/93‑1 (MQ=255) aaaTTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCcatca < 2:2520715/93‑1 (MQ=255) aaTTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCcatcat > 2:1118959/1‑93 (MQ=255) ttCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAAc < 2:4498499/93‑1 (MQ=255) tCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATaaag < 2:3779034/93‑3 (MQ=255) cGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGa < 2:1078727/93‑1 (MQ=255) gCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGc > 2:2576521/1‑93 (MQ=255) cATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAAAGAGCa > 2:10039/1‑93 (MQ=255) gatgaGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCaaca > 1:1879591/1‑91 (MQ=255) gatgaGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCaaaa < 2:2176093/93‑1 (MQ=255) gatgaGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCaaaa > 2:318492/1‑93 (MQ=255) gatgaGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCaaaa > 1:46625/1‑93 (MQ=255) atgaGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCaaaaa > 1:261417/1‑93 (MQ=255) atgaGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCaaaaa > 2:2891106/1‑93 (MQ=255) tgaGCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAg > 1:4298353/1‑93 (MQ=255) gCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGc > 1:3447124/1‑93 (MQ=255) gCATTCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGc > 2:834729/1‑93 (MQ=255) aTTCAGATAGTGGTGCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGa < 1:1124599/93‑1 (MQ=255) ttCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGAt < 2:1563384/93‑1 (MQ=255) ttCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGAt < 1:4155717/93‑1 (MQ=255) ttCAGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGAt < 2:4004064/93‑1 (MQ=255) ttCAGATAGTGGTTCACGCGCACGGGATGCGCACCGCCGGAGTAAGGATTTAATGAGGCTAGCGACGCCATCATAAAGCACAAACAGTGCGAt > 2:2843889/1‑93 (MQ=255) tCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATc < 1:1674744/93‑1 (MQ=255) aGATAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGt > 1:2056962/1‑93 (MQ=255) gATAGTGGTTCACGGGGCCGCGCTGCGGACCAGCGGGGAGAGGACTTACTGAGGCTAGTGACGACAACATAACGAGCAAAAAGCGCGATCGTc > 2:1107846/1‑93 (MQ=255) aTAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCa < 1:4544536/93‑1 (MQ=255) aTAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCa > 1:362441/1‑93 (MQ=255) tAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCaa > 1:1348725/1‑93 (MQ=255) tAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCaa > 1:1727005/1‑93 (MQ=255) tAGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCaa > 2:2656169/1‑93 (MQ=255) aGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCaaa > 1:879828/1‑93 (MQ=255) aGTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCaaa > 1:1523053/1‑93 (MQ=255) gTGGTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAg < 2:4301735/93‑1 (MQ=255) ggTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGga < 2:4370995/93‑1 (MQ=255) ggTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGga < 1:2203383/93‑1 (MQ=255) gTTCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGgag > 2:1147326/1‑93 (MQ=255) tCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGaa < 1:1646605/93‑1 (MQ=255) tCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGaa < 1:2566404/93‑1 (MQ=255) tCACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGaa < 2:3502075/93‑1 (MQ=255) cACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAAt < 2:2833784/93‑1 (MQ=255) cACGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAAt < 1:1986045/93‑1 (MQ=255) aCGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATc < 2:3236374/93‑1 (MQ=255) aCGCGCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATc < 2:627532/93‑1 (MQ=255) cgcgCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCg > 2:3897140/1‑93 (MQ=255) cgcgCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCg < 2:4505072/93‑1 (MQ=255) cgcgCACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCg > 1:3614329/1‑93 (MQ=255) gcgcACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGt < 1:1564500/93‑1 (MQ=255) gcgcACGGGCTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGt < 2:3343041/93‑1 (MQ=255) gcgcACGGGCTGCGCACCGCAGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGt < 2:3553856/93‑1 (MQ=255) | AAAGGCACAGCCAGCATCAGGGCCAGGCTAAATAAAGAAACTCGAAATTTCGGCATGATGAGCATTCAGATAGTGGTTCACGCGCACGGGTTGCGCACCGCCGGAGTAAGGATTTACTGAGGCTAGCGACGCCATCATAACGAGCAAAAAGTGCGATCGTCAAAGGAGAATCGT > NC_000913/2222835‑2223008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |