BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	231,241	C→T	T40T (ACC→ACT)	yafD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	231,241	0	C	T	100.0%	665.1 / NA	184	T40T (ACC→ACT)	yafD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (65/119); total (65/119)

Only 100 of 188 total aligned reads displayed.

TGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACCGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGATGCA  >  NC_000913/231151‑231331

 gTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGCACCGTTAAGTACTGaa                                                                                         >  1:2488782/1‑93 (MQ=255)

  ttGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAag                                                                                        >  2:3496186/1‑93 (MQ=255)

    gCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGTCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAagag                                                                                      <  2:2165142/93‑1 (MQ=255)

     ccGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGc                                                                                     <  2:2187998/93‑1 (MQ=255)

       ggACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGt                                                                                   >  1:1935210/1‑93 (MQ=255)

       ggACAACCTGCGGAAAGGATCTTACCGCCGGGGGCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGGGt                                                                                   >  2:1284308/1‑93 (MQ=255)

        gACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTa                                                                                  <  2:2425751/93‑1 (MQ=255)

        gACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTa                                                                                  >  2:1866519/1‑93 (MQ=255)

         aCAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTAt                                                                                 <  2:1907921/93‑1 (MQ=255)

         aCAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTAt                                                                                 >  1:3495482/1‑93 (MQ=255)

          cAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTAtt                                                                                <  1:3892347/93‑1 (MQ=255)

           aaCCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTc                                                                               >  1:3590078/1‑93 (MQ=255)

            aCCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCg                                                                              <  1:1863775/93‑1 (MQ=255)

             ccTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCgg                                                                             <  2:421266/93‑1 (MQ=255)

                gCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATc                                                                          >  2:1092289/1‑93 (MQ=255)

                 cGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCCCCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATcc                                                                         <  2:208911/93‑1 (MQ=255)

                 cGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATcc                                                                         <  2:703884/93‑1 (MQ=255)

                  ggAAAGGATCTTACCGCCGTGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCt                                                                        <  1:2205268/93‑1 (MQ=255)

                  ggAAAGGANCTTACCGCCGGGGTCTTNTGNGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCt                                                                        <  2:3333612/93‑1 (MQ=255)

                   gAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTg                                                                       >  1:1694484/1‑93 (MQ=255)

                   gAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTg                                                                       >  2:3655544/1‑93 (MQ=255)

                   gAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTg                                                                       <  1:4419534/93‑1 (MQ=255)

                    aaaGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTgg                                                                      <  2:3544494/93‑1 (MQ=255)

                     aaGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGgt                                                                     <  1:4516593/93‑1 (MQ=255)

                     aaGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGgt                                                                     >  1:3725585/1‑93 (MQ=255)

                      aGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGgtg                                                                    >  2:3089164/1‑93 (MQ=255)

                      aGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGgtg                                                                    >  2:1998777/1‑93 (MQ=255)

                      aGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGgtg                                                                    >  1:816844/1‑93 (MQ=255)

                       ggATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGgtgt                                                                   <  1:3111325/93‑1 (MQ=255)

                        gATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGtgtg                                                                  >  1:2334215/1‑93 (MQ=255)

                         aTCTTACCGCCGGGGCCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTgg                                                                 >  1:2065698/1‑93 (MQ=255)

                           tttACCGCCGTGGTCTGTGGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGaa                                                               <  2:322229/92‑1 (MQ=255)

                             tACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACa                                                             <  1:2694829/93‑1 (MQ=255)

                             tACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACa                                                             <  1:4068404/93‑1 (MQ=255)

                              gccgccgGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACat                                                            <  1:3108259/92‑1 (MQ=255)

                                cgccgGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACatat                                                          <  1:2594330/93‑1 (MQ=255)

                                cgccgGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACatat                                                          <  1:2472231/93‑1 (MQ=255)

                                 gccgGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACAtata                                                         <  1:2137259/93‑1 (MQ=255)

                                  ccgGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATAc                                                        <  1:845067/93‑1 (MQ=255)

                                     gggTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACaaa                                                     >  2:2866494/1‑93 (MQ=255)

                                      ggTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAAc                                                    <  1:2431605/93‑1 (MQ=255)

                                      ggTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAAc                                                    <  1:2556123/93‑1 (MQ=255)

                                       gTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACa                                                   <  1:1742526/93‑1 (MQ=255)

                                        tCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACaa                                                  >  2:965257/1‑92 (MQ=255)

                                        tCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAg                                                  >  2:1634442/1‑93 (MQ=255)

                                         gctttGCGGGCCTCCGGCCGGGC‑TTTCCCCCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAga                                                 <  1:2850121/91‑2 (MQ=255)

                                          ttttGGGAGCAT‑CGGCCAGGCATTACCACCTGGGGAAACGCTTAAAAATGAAGAGCGTATTCGGATGCTGGTGTGGGACATATACAAACAGCa                                                >  2:639823/1‑93 (MQ=255)

                                           tttGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCaa                                               <  1:4407906/93‑1 (MQ=255)

                                            ttGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAAc                                              <  1:3456474/93‑1 (MQ=255)

                                            ttGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAAc                                              <  2:3570760/93‑1 (MQ=255)

                                             tGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAAcg                                             <  2:2054169/93‑1 (MQ=255)

                                              gCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAAcgc                                            <  1:4656144/93‑1 (MQ=255)

                                                    aT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGaa                                      <  1:2963168/93‑1 (MQ=255)

                                                    aT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGaa                                      >  2:4510078/1‑93 (MQ=255)

                                                     t‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAAt                                     <  2:1043246/93‑1 (MQ=255)

                                                        ggCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATgg                                   <  2:1141149/93‑1 (MQ=255)

                                                         gCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGt                                  <  2:2761886/93‑1 (MQ=255)

                                                         gCCAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGt                                  <  1:3851204/93‑1 (MQ=255)

                                                          ccAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGtt                                 <  1:1407519/93‑1 (MQ=255)

                                                          ccAGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGtt                                 <  1:3505842/93‑1 (MQ=255)

                                                            aGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGt                               >  2:2442350/1‑93 (MQ=255)

                                                            aGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGt                               <  2:29535/93‑1 (MQ=255)

                                                            aGGCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGt                               <  2:305312/93‑1 (MQ=255)

                                                             ggCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTc                              >  2:4438989/1‑93 (MQ=255)

                                                             ggCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTc                              >  1:326742/1‑93 (MQ=255)

                                                              gCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCg                             <  1:3955948/93‑1 (MQ=255)

                                                              gCATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCg                             <  2:799064/93‑1 (MQ=255)

                                                               cATTCCCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCgg                            <  1:3363417/93‑1 (MQ=255)

                                                               cATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCgg                            <  1:708746/93‑1 (MQ=255)

                                                               cATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCgg                            <  1:2790999/93‑1 (MQ=255)

                                                               cATTACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCgg                            >  1:1918844/1‑93 (MQ=255)

                                                                 ttACCACCTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTa                          <  2:3377153/93‑1 (MQ=255)

                                                                     caccTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTaa                      <  2:3420964/93‑1 (MQ=255)

                                                                     caccTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTaa                      <  1:1017454/93‑1 (MQ=255)

                                                                      accTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTaaa                     <  1:3524266/93‑1 (MQ=255)

                                                                        cTGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGa                   >  1:1223420/1‑93 (MQ=255)

                                                                         tGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGaa                  >  1:1824228/1‑93 (MQ=255)

                                                                         tGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGaa                  <  1:3655668/93‑1 (MQ=255)

                                                                         tGGGGAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGaa                  <  1:611366/93‑1 (MQ=255)

                                                                         tGGGGAACCGTTAAGTACTGAAGAGCGTAGTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGaa                  <  2:4601909/93‑1 (MQ=255)

                                                                          ggggAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAAc                 <  1:2641353/93‑1 (MQ=255)

                                                                            ggAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTa               <  2:1534179/93‑1 (MQ=255)

                                                                             gAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTAc              <  2:3886999/93‑1 (MQ=255)

                                                                             gAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTAc              <  2:3087923/93‑1 (MQ=255)

                                                                             gAACCGTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTAGTCGGTATTACAGAACTAc              <  2:4582237/93‑1 (MQ=255)

                                                                               aCCGTTAAGTACTGAAGAGCGTATTCGGCTCCTGGTGTTGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAACAACCACgg            >  2:3018034/1‑93 (MQ=255)

                                                                                  gTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCaa         <  2:2230659/93‑1 (MQ=255)

                                                                                  gTTAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCaa         >  2:36163/1‑93 (MQ=255)

                                                                                   ttAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCaaa        <  2:4104161/93‑1 (MQ=255)

                                                                                   ttAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCaaa        >  1:4120332/1‑93 (MQ=255)

                                                                                   ttAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCaaa        >  1:566451/1‑93 (MQ=255)

                                                                                    tAAGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGCATTAAAGAACTACGGCAAAg       >  2:2922551/1‑93 (MQ=255)

                                                                                     aaGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGa      >  1:951448/1‑93 (MQ=255)

                                                                                     aaGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGa      <  2:2490323/93‑1 (MQ=255)

                                                                                     aaGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGa      <  1:1445475/93‑1 (MQ=255)

                                                                                     aaGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGa      <  2:87968/93‑1 (MQ=255)

                                                                                     aaGTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGa      <  1:1365026/93‑1 (MQ=255)

                                                                                       gTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGATg    >  2:3584040/1‑93 (MQ=255)

                                                                                       gTACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGATg    >  2:1329589/1‑93 (MQ=255)

                                                                                        tACTGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAGAGAACTACGGCAAAGATGc   <  2:4545254/93‑1 (MQ=255)

TGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCAT‑CGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACCGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGATGCA  >  NC_000913/231151‑231331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`