BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,293,202	T→C	M67V (ATG→GTG)	ccmE ←	cytochrome c biogenesis

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,293,202	0	T	C	100.0%	383.5 / NA	123	M67V (ATG→GTG)	ccmE	cytochrome c biogenesis
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (63/60); total (63/60)

Only 100 of 131 total aligned reads displayed.

CTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCATCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTAT  >  NC_000913/2293112‑2293288

cTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCa                                                                                      <  1:2413149/93‑1 (MQ=255)

 ttCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGcaccac                                                                                     >  1:3849860/1‑93 (MQ=255)

 ttCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGcaccac                                                                                     >  1:3420555/1‑93 (MQ=255)

 ttCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGcaccac                                                                                     >  2:2754998/1‑93 (MQ=255)

 ttCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGcaccac                                                                                     >  1:2009128/1‑93 (MQ=255)

    gTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCAt                                                                                  >  2:3569866/1‑93 (MQ=255)

    gTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCAt                                                                                  >  2:3464693/1‑93 (MQ=255)

     tAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATc                                                                                 >  1:4464248/1‑93 (MQ=255)

      aaGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATcc                                                                                <  2:3958856/93‑1 (MQ=255)

      aaGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATcc                                                                                >  1:2691512/1‑93 (MQ=255)

      aaGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATcc                                                                                <  2:2953380/93‑1 (MQ=255)

       agagACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATccc                                                                               >  1:3722436/1‑93 (MQ=255)

       agagACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATccc                                                                               >  1:1600985/1‑93 (MQ=255)

        gagaCATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATcccc                                                                              >  2:3897040/1‑92 (MQ=255)

        gagaCATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCg                                                                              >  2:2013749/1‑93 (MQ=255)

          gaCATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGcc                                                                            <  2:901913/93‑1 (MQ=255)

             aTCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAAc                                                                         >  2:3087972/1‑93 (MQ=255)

             aTCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAAc                                                                         >  1:1993300/1‑93 (MQ=255)

             aTCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAAc                                                                         >  2:851921/1‑93 (MQ=255)

              tCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAAcg                                                                        >  2:1229069/1‑93 (MQ=255)

                cACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAAcgcg                                                                      >  1:2160868/1‑93 (MQ=255)

                 aCTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACgcgc                                                                     <  1:572456/93‑1 (MQ=255)

                 aCTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACgcgc                                                                     >  1:4499789/1‑93 (MQ=255)

                    gAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGa                                                                  <  1:2174765/93‑1 (MQ=255)

                    gAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGa                                                                  >  1:914987/1‑93 (MQ=255)

                    gAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGa                                                                  <  1:533500/93‑1 (MQ=255)

                    gAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGa                                                                  >  2:460521/1‑93 (MQ=255)

                    gAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGa                                                                  <  1:4419016/93‑1 (MQ=255)

                     aGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGAc                                                                 <  2:3701844/93‑1 (MQ=255)

                      gCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACg                                                                >  2:4135296/1‑93 (MQ=255)

                      gCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACg                                                                >  2:917393/1‑93 (MQ=255)

                       ccTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGc                                                               >  2:2345596/1‑93 (MQ=255)

                       ccTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGc                                                               <  2:3138401/93‑1 (MQ=255)

                       ccTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGc                                                               <  2:1088400/93‑1 (MQ=255)

                        cTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCt                                                              >  2:1010295/1‑93 (MQ=255)

                        cTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCt                                                              >  2:1203134/1‑93 (MQ=255)

                          tCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGa                                                            <  1:3017947/93‑1 (MQ=255)

                             gCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCg                                                         >  2:693221/1‑93 (MQ=255)

                                tCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACt                                                      >  2:3812913/1‑93 (MQ=255)

                                tCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACt                                                      <  1:4563276/93‑1 (MQ=255)

                                tCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACt                                                      <  1:4222123/93‑1 (MQ=255)

                                tCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCACCCCGCCAACGCGCAGACGCTGACCGACt                                                      <  1:1379849/93‑1 (MQ=255)

                                   tAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTcc                                                   <  2:244856/93‑1 (MQ=255)

                                    aaaTGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCg                                                  <  1:3340188/93‑1 (MQ=255)

                                      aTGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGc                                                >  1:59361/1‑93 (MQ=255)

                                       tGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCa                                               >  2:1155952/1‑93 (MQ=255)

                                       tGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCa                                               >  1:1291949/1‑93 (MQ=255)

                                         gTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCAtt                                             >  2:3557733/1‑93 (MQ=255)

                                         gTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCAtt                                             <  2:3303271/93‑1 (MQ=255)

                                         gTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCAtt                                             <  2:1887689/93‑1 (MQ=255)

                                          tGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCAttt                                            <  2:4195331/93‑1 (MQ=255)

                                          tGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCAttt                                            <  1:767943/93‑1 (MQ=255)

                                           gAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTg                                           >  2:1902375/1‑93 (MQ=255)

                                            aaGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGc                                          >  1:1088876/1‑93 (MQ=255)

                                             aGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCt                                         >  2:3886686/1‑93 (MQ=255)

                                              ggTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTg                                        <  1:3072705/93‑1 (MQ=255)

                                              ggTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTg                                        >  1:3930717/1‑93 (MQ=255)

                                               gTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGa                                       >  1:1817253/1‑93 (MQ=255)

                                                 cACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGt                                     <  2:3724778/93‑1 (MQ=255)

                                                 cACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGt                                     >  1:1624754/1‑93 (MQ=255)

                                                  aCTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGtt                                    >  1:4117078/1‑93 (MQ=255)

                                                   cTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGttt                                   >  2:60665/1‑93 (MQ=255)

                                                    tttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTc                                  <  1:1591527/93‑1 (MQ=255)

                                                    tttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTc                                  <  2:4523262/93‑1 (MQ=255)

                                                    tttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTc                                  <  1:2813263/93‑1 (MQ=255)

                                                    tttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTc                                  >  1:803540/1‑93 (MQ=255)

                                                     ttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCa                                 <  2:607468/93‑1 (MQ=255)

                                                     ttCAGCGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCa                                 <  2:416846/93‑1 (MQ=255)

                                                          cGAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCtt                            <  1:1140266/93‑1 (MQ=255)

                                                           gAATTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCttc                           >  1:3232361/1‑92 (MQ=255)

                                                            aaTTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGc                          >  2:1623757/1‑93 (MQ=255)

                                                             aTTGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGcc                         <  1:1635487/93‑1 (MQ=255)

                                                              ttGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCg                        >  1:4648401/1‑93 (MQ=255)

                                                              ttGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCg                        >  1:2675563/1‑93 (MQ=255)

                                                              ttGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCg                        <  1:795158/93‑1 (MQ=255)

                                                               tGGGATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGt                       <  1:2356232/93‑1 (MQ=255)

                                                                  gATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTaga                    <  2:2343446/93‑1 (MQ=255)

                                                                  gATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTaga                    >  1:3454059/1‑93 (MQ=255)

                                                                  gATCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTaga                    <  2:2434261/93‑1 (MQ=255)

                                                                   aTCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTagag                   >  1:4453976/1‑93 (MQ=255)

                                                                    tCGCGCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAgaga                  <  1:382561/93‑1 (MQ=255)

                                                                     cgcgCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGaa                 <  1:481670/93‑1 (MQ=255)

                                                                     cgcgCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGaa                 <  1:393035/93‑1 (MQ=255)

                                                                     cgcgCTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGaa                 <  1:434228/93‑1 (MQ=255)

                                                                      gcgcTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAAt                <  2:2923664/93‑1 (MQ=255)

                                                                      gcgcTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAAt                >  1:3658169/1‑93 (MQ=255)

                                                                        gcTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGCTTCACGCTTGCCGTAGAGAAttt              >  1:3242365/1‑93 (MQ=255)

                                                                         cTGCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTc             <  1:4023070/93‑1 (MQ=255)

                                                                          ctcacaATACCCGGCACCCCCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTcc            <  2:2624338/91‑1 (MQ=255)

                                                                           gCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTccc           >  2:3684608/1‑93 (MQ=255)

                                                                           gCACACTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTccc           <  1:4353990/93‑1 (MQ=255)

                                                                            cacaCTGCCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTcccc          <  2:3006034/93‑1 (MQ=255)

                                                                            cacaCTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTcccc          <  1:2743410/93‑1 (MQ=255)

                                                                            cacaCTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCATGCCGTAGAGAATTTcccc          <  2:4579530/93‑1 (MQ=255)

                                                                             acacTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTccccc         >  1:3836/1‑93 (MQ=255)

                                                                              cacTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCg        <  1:195360/93‑1 (MQ=255)

                                                                                cTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGc      <  1:4344419/93‑1 (MQ=255)

                                                                                cTACCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGc      <  1:409624/93‑1 (MQ=255)

                                                                                  aCCCGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGt    >  1:1570950/1‑93 (MQ=255)

                                                                                    ccGGCACCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGtat  >  1:839723/1‑93 (MQ=255)

CTTCGTAAGAGACATCCACTGAGCCTTCAGCATCGTAAATGGTGAAGGTCACTTTCAGCGAATTGGGATCGCGCTGCACACTACCCGGCATCACCATCCCGCCAACGCGCAGACGCTGACCGACTTCCGGCATTTGCTGAGTTTCACGCTTGCCGTAGAGAATTTCCCCCGGCGTAT  >  NC_000913/2293112‑2293288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`