BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,296,123	T→C	T53A (ACC→GCC)	napC ←	cytochrome c‑type protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,296,123	0	T	C	100.0%	464.2 / NA	146	T53A (ACC→GCC)	napC	cytochrome c‑type protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (76/70); total (76/70)

Only 100 of 154 total aligned reads displayed.

GCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGCCAGAC  >  NC_000913/2296034‑2296212

gccgcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCAtt                                                                                        <  2:680490/93‑1 (MQ=255)

gccgcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCAtt                                                                                        >  1:4195228/1‑93 (MQ=255)

gccgcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCAtt                                                                                        <  1:2372354/93‑1 (MQ=255)

 ccgcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGCACTCTTCGGCATTg                                                                                       >  2:808753/1‑93 (MQ=255)

 ccgcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTg                                                                                       <  2:913333/93‑1 (MQ=255)

 ccgcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTg                                                                                       >  1:3025665/1‑93 (MQ=255)

  cgcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTgg                                                                                      <  1:3289478/93‑1 (MQ=255)

   gcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGc                                                                                     <  2:188365/93‑1 (MQ=255)

   gcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGc                                                                                     >  1:2202609/1‑93 (MQ=255)

   gcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGc                                                                                     >  2:1459242/1‑93 (MQ=255)

   gcTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGc                                                                                     >  2:1194425/1‑93 (MQ=255)

     tACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCtt                                                                                   <  1:296238/93‑1 (MQ=255)

     tACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCtt                                                                                   >  2:2215005/1‑93 (MQ=255)

     tACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCtt                                                                                   <  1:1455082/93‑1 (MQ=255)

      aCGTTTTTTGTAGTGCACGCAATTCATGTATTCCTGATACTCGGTGTTGCGCTTTTCGTAGCAGCTAATGCAGAACTCTTCGGCATTGGCttt                                                                                  <  2:2103082/93‑1 (MQ=255)

      aCGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCttt                                                                                  <  2:2411500/93‑1 (MQ=255)

       cGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCtttt                                                                                 <  1:2871514/93‑1 (MQ=255)

        ggTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCttttt                                                                                >  1:3528193/1‑93 (MQ=255)

          ttgttgTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTcc                                                                              <  2:2023073/93‑1 (MQ=255)

           tgttgtAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCa                                                                             >  2:1819004/1‑93 (MQ=255)

            gttgtAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCCTCGGCATTGGCTTTTTCCAt                                                                            >  2:4371889/1‑93 (MQ=255)

             ttgtAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATc                                                                           >  2:3011346/1‑93 (MQ=255)

             ttgtAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATc                                                                           <  2:4086338/93‑1 (MQ=255)

             ttgtAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATc                                                                           >  1:3830945/1‑93 (MQ=255)

              tgtAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATcc                                                                          <  1:4592535/93‑1 (MQ=255)

               gtAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATccc                                                                         <  2:95550/93‑1 (MQ=255)

               gtAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATccc                                                                         <  2:2504285/93‑1 (MQ=255)

                 aGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCgg                                                                       <  1:29655/93‑1 (MQ=255)

                        ggAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTaaa                                                                <  1:634787/93‑1 (MQ=255)

                        ggAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTaaa                                                                <  1:1679331/93‑1 (MQ=255)

                        ggAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTCTTCCATCCCGCTGTCaaa                                                                >  2:759873/1‑93 (MQ=255)

                         gAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAg                                                               >  2:3966773/1‑93 (MQ=255)

                         gAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAg                                                               >  1:1655688/1‑93 (MQ=255)

                          aaTCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGc                                                              <  2:4599177/93‑1 (MQ=255)

                            tCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCa                                                            <  2:3994581/93‑1 (MQ=255)

                              cATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCAcc                                                          >  1:1041575/1‑93 (MQ=255)

                               aTGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCAccc                                                         >  1:2216868/1‑93 (MQ=255)

                                 gTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCa                                                       >  1:3829197/1‑93 (MQ=255)

                                  tATTCCTGATACACCGTTTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCag                                                      <  2:4295553/93‑1 (MQ=255)

                                   aTTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCaga                                                     <  1:374303/93‑1 (MQ=255)

                                   aTTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCaga                                                     >  1:64990/1‑93 (MQ=255)

                                    ttCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTCAAGCCACCCCagaa                                                    >  1:3868079/1‑93 (MQ=255)

                                    ttCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCagaa                                                    <  1:3968462/93‑1 (MQ=255)

                                    ttCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCagaa                                                    >  2:4231404/1‑93 (MQ=255)

                                    ttCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCagaa                                                    >  2:3014468/1‑93 (MQ=255)

                                    ttCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCagaa                                                    <  1:792617/93‑1 (MQ=255)

                                      ccTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCagaaga                                                  >  1:2346659/1‑93 (MQ=255)

                                      ccTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCagaaga                                                  <  1:1584972/93‑1 (MQ=255)

                                        tGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACg                                                >  1:333498/1‑93 (MQ=255)

                                         gATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGa                                               <  1:2126563/93‑1 (MQ=255)

                                         gATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGa                                               <  1:2218016/93‑1 (MQ=255)

                                         gATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGa                                               <  2:1459180/93‑1 (MQ=255)

                                          aTACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGAt                                              <  1:3620719/93‑1 (MQ=255)

                                            acacCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATgc                                            >  1:1127535/1‑93 (MQ=255)

                                               ccGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATgccgc                                         >  2:2619912/1‑93 (MQ=255)

                                                cGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATgccgcc                                        >  2:2891062/1‑93 (MQ=255)

                                                   gtTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCcaac                                     <  1:3237133/93‑1 (MQ=255)

                                                    ttGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCcaaca                                    <  2:1424919/93‑1 (MQ=255)

                                                       cgcATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACaaaa                                 <  1:1023563/93‑1 (MQ=255)

                                                        gcATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAAc                                <  2:3138318/93‑1 (MQ=255)

                                                        gcATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAAc                                >  1:862115/1‑93 (MQ=255)

                                                        gcATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAAc                                <  2:2323569/93‑1 (MQ=255)

                                                         cATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAAcc                               <  1:1184025/93‑1 (MQ=255)

                                                         cATTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAAcc                               >  2:687863/1‑93 (MQ=255)

                                                          aTTTCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCg                              >  2:362520/1‑93 (MQ=255)

                                                           tttCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGa                             >  2:1007456/1‑93 (MQ=255)

                                                           tttCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGa                             >  1:4422739/1‑93 (MQ=255)

                                                           tttCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGa                             >  2:4523515/1‑93 (MQ=255)

                                                             tCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCTGGTGTTAAAGCCACCCCAGAAGGCGATGCCGCCAACAAAACCGATc                           <  2:3779574/93‑1 (MQ=255)

                                                             tCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATc                           <  2:386851/93‑1 (MQ=255)

                                                             tCGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATc                           >  1:146892/1‑93 (MQ=255)

                                                              cGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCa                          <  2:2121003/93‑1 (MQ=255)

                                                              cGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCa                          >  1:1515976/1‑93 (MQ=255)

                                                              cGTGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCa                          <  1:4147760/93‑1 (MQ=255)

                                                                tGGCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAAc                        <  2:1243165/93‑1 (MQ=255)

                                                                 ggCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTATAAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAAca                       <  1:483583/93‑1 (MQ=255)

                                                                  gCAGCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAAcag                      >  2:1354752/1‑93 (MQ=255)

                                                                     gCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAAcagcag                   >  2:2971388/1‑93 (MQ=255)

                                                                     gCTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAAcagcag                   >  2:1440400/1‑93 (MQ=255)

                                                                      cTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACagcagc                  >  1:4604481/1‑93 (MQ=255)

                                                                      cTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACagcagc                  <  1:1348915/93‑1 (MQ=255)

                                                                      cTAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACagcagc                  <  1:366068/93‑1 (MQ=255)

                                                                       tAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCg                 >  1:53636/1‑93 (MQ=255)

                                                                       tAATGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCg                 <  2:2378677/93‑1 (MQ=255)

                                                                        aaTGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGt                >  2:3519126/1‑93 (MQ=255)

                                                                          tGCAGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTcc              >  2:1706905/1‑93 (MQ=255)

                                                                             aGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCa           <  1:4382984/93‑1 (MQ=255)

                                                                             aGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCa           >  2:3222579/1‑93 (MQ=255)

                                                                             aGAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCa           >  1:1834912/1‑93 (MQ=255)

                                                                              gAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAg          >  1:1377019/1‑93 (MQ=255)

                                                                              gAACTCTTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAg          >  2:4310060/1‑93 (MQ=255)

                                                                                 ctctTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAgcgc       >  2:1445349/1‑93 (MQ=255)

                                                                                  tctTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGcc      >  2:1691512/1‑93 (MQ=255)

                                                                                   ctTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGCCa     >  1:2595196/1‑93 (MQ=255)

                                                                                   ctTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGCCa     <  2:3320713/93‑1 (MQ=255)

                                                                                   ctTCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGCCa     >  1:3000751/1‑93 (MQ=255)

                                                                                    ttCGGCCTTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGGCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGCCAg    >  2:3903069/1‑93 (MQ=255)

                                                                                    ttCGGCATTGTCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGCCAg    <  2:3663311/93‑1 (MQ=255)

                                                                                     tCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGCCAGa   <  1:4115145/93‑1 (MQ=255)

                                                                                     tCGGCATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGCCAGa   >  2:908564/1‑93 (MQ=255)

GCCGCTACGGTTGTTGTAGTGCACGGAATCCATGTATTCCTGATACACCGTGTTGCGCATTTCGTGGCAGCTAATGCAGAACTCTTCGGTATTGGCTTTTTCCATCCCGGTGTTAAAGCCACCCCAGAAGACGATGCCGCCAACAAAACCGATCAACAGCAGCGTCCCCAGCGCCAGAC  >  NC_000913/2296034‑2296212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`