Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,331,739 A→G intergenic (‑3922/+617) b2226 ← / ← b2229 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,331,7390AG99.2% 374.9 / ‑5.1 121intergenic (‑3922/+617)b2226/b2229hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (54/65);  total (55/66)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

Only 100 of 124 total aligned reads displayed.

GGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCA  >  NC_000913/2331649‑2331831
                                                                                          |                                                                                            
ggTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGat                                                                                            >  2:2397672/1‑93 (MQ=255)
ggTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGat                                                                                            <  2:3151715/93‑1 (MQ=255)
 gTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGata                                                                                           >  2:3449586/1‑93 (MQ=255)
  tATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGatat                                                                                          <  1:1620567/93‑1 (MQ=255)
  tATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGatat                                                                                          <  2:806128/93‑1 (MQ=255)
  tATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGatat                                                                                          >  1:2802488/1‑93 (MQ=255)
  tATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGatat                                                                                          <  2:619685/93‑1 (MQ=255)
    tCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATaa                                                                                        >  1:3921306/1‑93 (MQ=255)
     cGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATaaa                                                                                       <  1:4472189/93‑1 (MQ=255)
      ggAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAAt                                                                                      <  1:3936126/93‑1 (MQ=255)
       gAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATg                                                                                     >  2:1785352/1‑93 (MQ=255)
       gAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATg                                                                                     >  1:2565926/1‑93 (MQ=255)
        aaacaaacACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGt                                                                                    <  2:2412083/93‑1 (MQ=255)
           caaacaCCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTAc                                                                                 <  2:1228206/93‑1 (MQ=255)
           caaacaCCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTAc                                                                                 <  2:2027100/93‑1 (MQ=255)
           caaacaCCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTAc                                                                                 <  1:1744433/93‑1 (MQ=255)
            aaacaCCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTAcc                                                                                <  2:263428/93‑1 (MQ=255)
             aacaCCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTAccc                                                                               <  1:1183336/93‑1 (MQ=255)
                cccaccGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGc                                                                            <  2:3688573/92‑1 (MQ=255)
                accaccGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGc                                                                            >  1:2464930/1‑93 (MQ=255)
                  caccGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTg                                                                          >  2:1833487/1‑93 (MQ=255)
                   accGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTgc                                                                         >  2:2538350/1‑93 (MQ=255)
                   accGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTgc                                                                         >  1:638766/1‑93 (MQ=255)
                    ccGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTgcg                                                                        >  2:125880/1‑93 (MQ=255)
                      gtcgtcGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTgcggc                                                                      >  1:2904884/1‑93 (MQ=255)
                        cgtcgCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCga                                                                    <  2:3572443/93‑1 (MQ=255)
                          tcgCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCgaga                                                                  <  1:4557784/93‑1 (MQ=255)
                          tcgCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACACGGCTGCGGCgagg                                                                  >  1:3804160/1‑92 (MQ=255)
                             cccGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGa                                                               >  1:2141822/1‑93 (MQ=255)
                             cccGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTAGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGa                                                               <  1:3298374/93‑1 (MQ=255)
                              ccGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGaa                                                              >  1:1861005/1‑93 (MQ=255)
                              ccGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGaa                                                              <  2:522324/93‑1 (MQ=255)
                              ccGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGaa                                                              <  1:45394/93‑1 (MQ=255)
                               cGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGaaa                                                             >  2:2258541/1‑93 (MQ=255)
                               cGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGaaa                                                             <  1:1183073/93‑1 (MQ=255)
                                gATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAAt                                                            >  2:4157773/1‑93 (MQ=255)
                                gATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAAt                                                            <  2:968213/93‑1 (MQ=255)
                                gATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAAt                                                            >  1:2936276/1‑93 (MQ=255)
                                 aTACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAAtt                                                           <  1:4199252/93‑1 (MQ=255)
                                 aTACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAAtt                                                           <  1:353626/93‑1 (MQ=255)
                                   ccccACCACCCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGc                                                         <  2:3355680/92‑1 (MQ=255)
                                    cccACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCt                                                        <  1:3343750/93‑1 (MQ=255)
                                     ccaccaACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTg                                                       >  2:4170196/1‑93 (MQ=255)
                                       accaaccaTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGa                                                     <  2:3677284/93‑1 (MQ=255)
                                       accaaccaTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGa                                                     <  2:203593/93‑1 (MQ=255)
                                       accaaccaTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGa                                                     <  2:2013979/93‑1 (MQ=255)
                                         caaccaTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATg                                                   <  1:2305649/93‑1 (MQ=255)
                                         caaccaTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATg                                                   <  2:4437612/93‑1 (MQ=255)
                                          aaccaTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATgc                                                  <  2:2437566/93‑1 (MQ=255)
                                           accaTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATgcg                                                 >  2:4213271/1‑93 (MQ=255)
                                           accaTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCCGCGAGATGAAATTGCTGGATgcg                                                 <  1:3597728/93‑1 (MQ=255)
                                             caTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGcc                                               >  2:4295815/1‑93 (MQ=255)
                                              aTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCt                                              <  1:3254106/93‑1 (MQ=255)
                                              aTCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCt                                              >  2:3879368/1‑93 (MQ=255)
                                               tCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCtt                                             >  1:986926/1‑93 (MQ=255)
                                               tCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCtt                                             >  1:539290/1‑93 (MQ=255)
                                                cGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTc                                            <  2:898305/93‑1 (MQ=255)
                                                 cccTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGTCGAGATGAAATTGCTGGATGCGCCTTcc                                           <  2:1702015/92‑1 (MQ=255)
                                                  ccTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCa                                          >  1:541428/1‑93 (MQ=255)
                                                  ccTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCa                                          >  2:3924959/1‑93 (MQ=255)
                                                      gacgaGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGttt                                      >  2:3241159/1‑93 (MQ=255)
                                                          aGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTAcc                                  <  1:2036164/93‑1 (MQ=255)
                                                          aGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTAcc                                  >  1:1862994/1‑93 (MQ=255)
                                                           ggTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTAccc                                 >  2:520053/1‑93 (MQ=255)
                                                            gTACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTAcccc                                <  2:1944075/93‑1 (MQ=255)
                                                             tACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCt                               <  2:839364/93‑1 (MQ=255)
                                                             tACAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCt                               <  2:1987741/93‑1 (MQ=255)
                                                              aCAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCtt                              <  2:587384/93‑1 (MQ=255)
                                                              aCAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCtt                              >  1:1381718/1‑93 (MQ=255)
                                                               cAGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtg                             >  1:4123731/1‑93 (MQ=255)
                                                                aGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgc                            <  2:3278010/93‑1 (MQ=255)
                                                                aGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgc                            <  1:4285486/93‑1 (MQ=255)
                                                                aGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgc                            <  1:3770279/93‑1 (MQ=255)
                                                                aGTCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgc                            <  1:3036328/93‑1 (MQ=255)
                                                                  tCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgctg                          >  1:4186477/1‑93 (MQ=255)
                                                                  tCCCGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgctg                          >  1:3434938/1‑93 (MQ=255)
                                                                   cccGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTtgctgc                         >  2:4035543/1‑93 (MQ=255)
                                                                     cGGCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCgg                       >  1:3140120/1‑93 (MQ=255)
                                                                      ggCTCTTGTTGGCGGAGAGGGATATAAATGTTCCCCGGCTGCGGCGAGATGAAATTGCTGGAGGCGCCTTCCAGTTTTCCCCCTTGCTGCGGc                      <  2:2714574/93‑1 (MQ=255)
                                                                       gCTCTTGTTGGCCGAGAGGGATCTAAATGTTACCCGGCTGCGGCGGGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTTCGGCt                     >  2:2873625/1‑93 (MQ=255)
                                                                       gCTCTTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCt                     >  1:2149968/1‑93 (MQ=255)
                                                                         tctTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCg                   >  2:2928773/1‑93 (MQ=255)
                                                                         tctTGTTGGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCg                   >  1:4242895/1‑93 (MQ=255)
                                                                           ttgttgGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGaa                 <  2:4218071/93‑1 (MQ=255)
                                                                           ttgttgGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGaa                 >  1:3026322/1‑93 (MQ=255)
                                                                           ttgttgGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGaa                 <  2:1378971/93‑1 (MQ=255)
                                                                           ttgttgGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGaa                 <  1:883263/93‑1 (MQ=255)
                                                                           ttgttgGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATCGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGaa                 <  1:3303140/93‑1 (MQ=255)
                                                                            tgttgGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGTATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAAc                <  2:1305881/93‑1 (MQ=255)
                                                                             gttgGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACg               >  2:1949155/1‑93 (MQ=255)
                                                                              ttgGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACgg              <  2:2913078/93‑1 (MQ=255)
                                                                               tgGCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGt             <  2:2974970/93‑1 (MQ=255)
                                                                                ggCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGtt            <  1:563629/93‑1 (MQ=255)
                                                                                ggCCGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGtt            <  2:2655023/93‑1 (MQ=255)
                                                                                 gCCGAGAGGGATATAAATGTTAGCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTGCCCCTTGCTGCGGCTCGAACGGttt           <  1:2083447/93‑1 (MQ=255)
                                                                                  ccGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTa          <  2:2042065/93‑1 (MQ=255)
                                                                                  ccGAGAGGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTa          <  2:1942557/93‑1 (MQ=255)
                                                                                     agagGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGcc       <  1:1781053/93‑1 (MQ=255)
                                                                                      gagGGATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCt      >  1:251453/1‑93 (MQ=255)
                                                                                          aaTATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCa  <  1:3514366/93‑1 (MQ=255)
                                                                                          |                                                                                            
GGTATCGGAAACAAACACCACCGTCGTCGCCCGATACCCACCAACCATCGCCTCGACGAGGTACAGTCCCGGCTCTTGTTGGCCGAGAGGAATATAAATGTTACCCGGCTGCGGCGAGATGAAATTGCTGGATGCGCCTTCCAGTTTTACCCCTTGCTGCGGCTCGAACGGTTTAGCCTGCCA  >  NC_000913/2331649‑2331831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: