BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,360,682	T→C	A324A (GCA→GCG)	b2249 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,360,682	0	T	C	97.6%	241.1 / ‑3.0	82	A324A (GCA→GCG)	b2249	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (61/19); total (62/20)
Fisher's exact test for biased strand distribution p-value = 4.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01

Only 100 of 122 total aligned reads displayed.

GTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGTGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTCACA  >  NC_000913/2360593‑2360771

gTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGcc                                                                                         >  2:3478637/1‑93 (MQ=255)

gTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGcc                                                                                         >  1:55866/1‑93 (MQ=255)

 tGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCa                                                                                        >  1:3395814/1‑93 (MQ=255)

 tGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCa                                                                                        >  1:3146966/1‑93 (MQ=255)

  gCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAg                                                                                       >  2:1356524/1‑93 (MQ=255)

   cTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGGGCCAGc                                                                                      >  1:1499742/1‑93 (MQ=255)

    tGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGcc                                                                                     >  1:552176/1‑93 (MQ=255)

     gAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGccc                                                                                    >  1:4091183/1‑93 (MQ=255)

        aCGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGc                                                                                 >  2:2497506/1‑93 (MQ=255)

           cacaCGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCaaa                                                                              >  1:412969/1‑93 (MQ=255)

            acacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCaaaa                                                                             >  1:4630799/1‑93 (MQ=255)

            acacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCaaaa                                                                             <  1:2771814/93‑1 (MQ=255)

            acacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCaaaa                                                                             >  1:225706/1‑93 (MQ=255)

             cacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCaaaag                                                                            >  1:3680283/1‑92 (MQ=255)

              acGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATg                                                                           >  1:1033259/1‑93 (MQ=255)

                 cAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGTGCCAGCCCGGCAAAATGG‑tt                                                                       <  1:1087669/93‑1 (MQ=255)

                 cAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑tt                                                                       <  1:1897371/93‑1 (MQ=255)

                 cAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑tt                                                                       <  1:1803795/93‑1 (MQ=255)

                  agagCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTg                                                                      >  2:2464885/1‑93 (MQ=255)

                   gagCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTgg                                                                     >  2:3906885/1‑93 (MQ=255)

                    agCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGc                                                                    <  1:4239968/93‑1 (MQ=255)

                     gCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGcc                                                                   <  2:1673437/93‑1 (MQ=255)

                     gCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGcc                                                                   <  1:642611/93‑1 (MQ=255)

                      cGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGccc                                                                  <  1:2720014/93‑1 (MQ=255)

                       gAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCccg                                                                 >  1:888153/1‑93 (MQ=255)

                       gAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCccg                                                                 <  1:3514882/93‑1 (MQ=255)

                        aaaGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCccgc                                                                >  1:1818554/1‑93 (MQ=255)

                           gTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGt                                                             >  1:3948064/1‑93 (MQ=255)

                           gTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGt                                                             >  1:1617330/1‑93 (MQ=255)

                           gTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCAAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGt                                                             <  2:2317400/93‑1 (MQ=255)

                              ccGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCt                                                          >  2:2801673/1‑93 (MQ=255)

                               cGTCTGGCGTGGCTAGCGCAAATTTGAGATGTTCTTTCTCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTg                                                         <  2:2436407/93‑1 (MQ=255)

                               cGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTg                                                         >  1:1810395/1‑93 (MQ=255)

                                gTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTga                                                        >  1:128499/1‑92 (MQ=255)

                                gTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGt                                                        >  1:1656362/1‑93 (MQ=255)

                                 tCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTa                                                       <  2:2003261/93‑1 (MQ=255)

                                 tCTGGCGTGGCTAGCGCAAAATTTAGATGCTCGTTCTCGAAAACC‑CAAAAAGCCCGCGCCAGCCCGGCCAAAAGG‑GTGGGCCGCCGCTCTGTa                                                       >  2:1799319/1‑93 (MQ=255)

                                  cgggCGTGGCTAGCGCAAAGTTGAGATGCTCGTCCTCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTaa                                                      <  2:4367559/91‑1 (MQ=255)

                                  cTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAATTGG‑TTGGCCCGCCGTTCTGTaa                                                      <  1:4135609/93‑1 (MQ=255)

                                   tGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAAt                                                     <  1:4245770/93‑1 (MQ=255)

                                   tGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAAt                                                     >  1:3640267/1‑93 (MQ=255)

                                    ggCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATc                                                    >  1:1128683/1‑93 (MQ=255)

                                     gCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATcc                                                   >  2:4068734/1‑93 (MQ=255)

                                     gCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATcc                                                   >  2:6595/1‑93 (MQ=255)

                                     gCGTGCCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATcc                                                   <  2:3907674/93‑1 (MQ=255)

                                      cGTTGCTAGCGAAAATTAGAGATGCCCGTTCTCAAAACCG‑GAAACACCCAGCGCCGGCCCGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCa                                                  <  2:4269404/93‑1 (MQ=255)

                                       gTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAg                                                 >  2:4369120/1‑93 (MQ=255)

                                       gTGGCTAGCGAAAAGTTGAGATGCTCGTTCTCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAg                                                 <  1:815003/93‑1 (MQ=255)

                                        tGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGt                                                <  2:1034825/93‑1 (MQ=255)

                                        tGGCTAGCGCAAAGCTGAGATGCTCGTTCTCGGAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGt                                                >  1:3828130/1‑93 (MQ=255)

                                              gcgcAAAGTTGAGATGCTCGTTCGCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAAGGG‑TGGGCCCGCCGTTCTGTAATCCAGTGCGCAg                                          <  2:1249291/93‑1 (MQ=255)

                                               cgcAAAGTTGAGATGCTCTTTCTCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGAAAAATGG‑TGGCCCCGCCGTTCTGTAATCCAGTGCGCAGt                                         <  2:4284869/93‑1 (MQ=255)

                                               cgcAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGt                                         >  2:3057783/1‑93 (MQ=255)

                                                 aaaaGTGGAGATGCTCGTTCTCGAACCCA‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGttt                                       <  2:4317380/92‑1 (MQ=255)

                                                  aaaGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTg                                      >  2:2693284/1‑93 (MQ=255)

                                                   aaGTTGAGATGCTCTTACTCAAAACCC‑GAAACAGCCAGCCCCAGCCCGGCAAAATGG‑TTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTgc                                     <  1:2771158/93‑1 (MQ=255)

                                                   aaGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTgc                                     >  2:2185817/1‑93 (MQ=255)

                                                     gTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTgcgc                                   >  1:1623056/1‑93 (MQ=255)

                                                       tGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCa                                 >  1:498772/1‑93 (MQ=255)

                                                         agaTGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAgg                               >  2:3342077/1‑93 (MQ=255)

                                                          gaTGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAggg                              >  1:2544235/1‑93 (MQ=255)

                                                          gaTGCTCGTTCTCAAACCCC‑GAAACACCCAGCGCCAGCCCGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAggg                              <  2:4163485/93‑1 (MQ=255)

                                                          agttctctTTCTCAAAACCC‑CAAACAGCCCGCGCCCACCCGGAAAAATGGTTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAgg                               <  1:379146/89‑1 (MQ=255)

                                                           aTGCTCGTTCTCGAACCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGt                             <  1:3287843/93‑1 (MQ=255)

                                                            tGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGtt                            <  1:1381436/93‑1 (MQ=255)

                                                            tGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGtt                            >  2:794881/1‑93 (MQ=255)

                                                            tGCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGtt                            >  1:420989/1‑93 (MQ=255)

                                                             gCTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGttt                           >  1:841276/1‑93 (MQ=255)

                                                              cTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtc                          >  1:1021247/1‑93 (MQ=255)

                                                              cTCGTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtc                          >  2:3259978/1‑93 (MQ=255)

                                                                 gTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCGAGGGTTtcctc                       >  2:1554497/1‑93 (MQ=255)

                                                                 gTTCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctc                       >  1:1172147/1‑93 (MQ=255)

                                                                  ttCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctcc                      >  2:1645874/1‑93 (MQ=255)

                                                                  ttCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctcc                      >  2:4022901/1‑93 (MQ=255)

                                                                  ttCTCGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctcc                      >  2:4005858/1‑93 (MQ=255)

                                                                  ttCTCGAAACCC‑AAAACAGCCAGCGCCAGCCCGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctcc                      <  1:289668/93‑1 (MQ=255)

                                                                   tctcGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTcctcct                     >  2:4477039/1‑93 (MQ=255)

                                                                     tcGAAACCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCtgt                   >  1:3867221/1‑93 (MQ=255)

                                                                     gcaaaaCCC‑AAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCtgt                   <  1:200386/90‑1 (MQ=255)

                                                                       gAACCCC‑AAAACAGCCAGCGCCAGCCGGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGa                 <  2:3192255/93‑1 (MQ=255)

                                                                        aacccc‑GAAACAGCCAGCCCCAGCCGGGCAAAATGG‑TTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGaa                <  1:4056855/90‑1 (MQ=255)

                                                                        aaaCCT‑GAACCAGCCAGCGCCAGCCCGGAAAAATGG‑TGGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGaa                <  1:1494654/93‑1 (MQ=255)

                                                                         acccc‑GAAACAGCCAGCGCCAGCCGGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAg               <  1:4276501/91‑1 (MQ=255)

                                                                         aaCCCGGAAACAGCCAGCGCGAGCCCGGCAAAATGG‑TTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGaa                <  2:2179153/93‑1 (MQ=255)

                                                                          cccc‑AAACCACCCAGCCCCACCCGGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAgg              <  2:2691575/92‑1 (MQ=255)

                                                                          aCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAgg              >  1:282305/1‑93 (MQ=255)

                                                                          aCCC‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAgg              >  2:3081838/1‑93 (MQ=255)

                                                                           ccc‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGa             >  1:3909268/1‑93 (MQ=255)

                                                                            cc‑GAAACAGCCAGCGCCAGCCCGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGaa            <  2:922899/93‑1 (MQ=255)

                                                                             ccaaaaCACCCAGCGCCACCCCGGCAAAATGG‑TTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGaa            <  2:4092015/90‑1 (MQ=255)

                                                                             c‑GAAACAGCCAGCGCCAGCCCGGCAAAATGG‑TTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc           <  1:1808512/93‑1 (MQ=255)

                                                                             c‑GAAACAGCCAGCCCCACCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc           <  1:2370495/93‑1 (MQ=255)

                                                                               gAAACAGCTAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAcc          >  2:4543315/1‑93 (MQ=255)

                                                                                aaaCAGCCAGCGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCa         >  1:4087778/1‑93 (MQ=255)

                                                                                 aaCAGCGAGCCCCACCCGGGAAAAGTGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCAc        <  2:2234067/93‑1 (MQ=255)

                                                                                 aaCAGCCGGCGCCCGCCCGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCAc        <  2:921006/93‑1 (MQ=255)

                                                                                   cagccagcGCCAGCCCGGCAAAATGG‑TTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACtt      <  1:1412863/93‑1 (MQ=255)

                                                                                     gccagcgccagcCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTcc    >  1:252367/1‑92 (MQ=255)

                                                                                      ccAGCGCCGGCCCGGAAAAATGG‑TTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTcac   <  1:3774844/93‑1 (MQ=255)

                                                                                       cAGCGCCAGCCCGGAAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTcaca  <  1:3922180/93‑1 (MQ=255)

GTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCC‑GAAACAGCCAGTGCCAGCCCGGCAAAATGG‑TTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTCACA  >  NC_000913/2360593‑2360771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`