BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,417,813	T→C	intergenic (‑8/+48)	b2300 ← / ← yfcF	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,417,813	0	T	C	100.0%	456.5 / NA	145	intergenic (‑8/+48)	b2300/yfcF	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (55/90); total (55/90)

Only 100 of 165 total aligned reads displayed.

GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGA  >  NC_000913/2417723‑2417901

 cACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccct                                                                                       >  2:3910254/1‑93 (MQ=255)

  aCCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccctc                                                                                      >  2:3916433/1‑93 (MQ=255)

   ccGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcg                                                                                     <  2:3978674/93‑1 (MQ=255)

   ccGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcg                                                                                     >  2:57031/1‑93 (MQ=255)

   ccGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcg                                                                                     <  1:3524463/93‑1 (MQ=255)

   ccGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcg                                                                                     >  1:4401545/1‑93 (MQ=255)

   ccGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcg                                                                                     <  1:474094/93‑1 (MQ=255)

     gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc                                                                                   >  1:3578334/1‑93 (MQ=255)

       tttGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGACTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGa                                                                                 >  2:1487896/1‑93 (MQ=255)

       tttGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGa                                                                                 >  1:1415106/1‑93 (MQ=255)

              aaaCAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCCCCCCTCGTCGAAAAAACg                                                                          <  2:4441448/93‑1 (MQ=255)

                acaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTa                                                                        >  2:4316173/1‑93 (MQ=255)

                 caacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTaa                                                                       <  2:1570090/93‑1 (MQ=255)

                 caacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTaa                                                                       <  2:4127384/93‑1 (MQ=255)

                 caacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTaa                                                                       <  2:2550479/93‑1 (MQ=255)

                  aacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAg                                                                      <  1:2643119/93‑1 (MQ=255)

                   acTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGc                                                                     >  2:186709/1‑93 (MQ=255)

                    cTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCt                                                                    >  1:2107683/1‑93 (MQ=255)

                     tcgaGAACACGTTCCGTCGCCGGTAACGACCCATGAATGGCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTa                                                                   <  2:3245164/90‑1 (MQ=255)

                      ccAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAt                                                                  <  2:2845588/93‑1 (MQ=255)

                      ccAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAt                                                                  <  2:336696/93‑1 (MQ=255)

                      ccAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAt                                                                  >  2:4336420/1‑93 (MQ=255)

                      ccAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAt                                                                  <  2:4623510/93‑1 (MQ=255)

                        aGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAACAACGTAAGCTATgt                                                                >  1:1712439/1‑92 (MQ=255)

                            cacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACt                                                            <  2:76693/93‑1 (MQ=255)

                              cGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTgg                                                          <  1:1663938/93‑1 (MQ=255)

                               gTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGa                                                         <  2:1299186/93‑1 (MQ=255)

                                 tCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAtt                                                       >  2:1353375/1‑93 (MQ=255)

                                 tCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAtt                                                       <  2:2211807/93‑1 (MQ=255)

                                  ccGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc                                                      <  1:3926971/93‑1 (MQ=255)

                                   cGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCt                                                     <  2:1256368/93‑1 (MQ=255)

                                   cGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCt                                                     <  2:2796858/93‑1 (MQ=255)

                                   cGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCt                                                     <  1:2466394/93‑1 (MQ=255)

                                    gTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTg                                                    >  1:4267274/1‑93 (MQ=255)

                                     tCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGt                                                   >  2:3590742/1‑93 (MQ=255)

                                     tCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGt                                                   >  1:1051574/1‑93 (MQ=255)

                                      cGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCTCCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTc                                                  <  1:1040502/93‑1 (MQ=255)

                                        ccGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGt                                                <  2:1047056/93‑1 (MQ=255)

                                        ccGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGt                                                <  2:2209636/93‑1 (MQ=255)

                                         cGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGtt                                               <  2:3320037/93‑1 (MQ=255)

                                          ggTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTg                                              <  1:2962128/93‑1 (MQ=255)

                                          ggTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTg                                              >  1:3902781/1‑93 (MQ=255)

                                              aCGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTAt                                          >  2:1487797/1‑93 (MQ=255)

                                              aCGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTAt                                          <  2:3552289/93‑1 (MQ=255)

                                               cGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATc                                         <  2:4533504/93‑1 (MQ=255)

                                                gACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCa                                        <  2:476238/93‑1 (MQ=255)

                                                gACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCa                                        >  2:1430396/1‑93 (MQ=255)

                                                gACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCa                                        <  1:4487164/93‑1 (MQ=255)

                                                 aCCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAg                                       >  1:4328117/1‑93 (MQ=255)

                                                  cccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGc                                      <  1:4609824/93‑1 (MQ=255)

                                                   ccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGcc                                     <  2:3261611/93‑1 (MQ=255)

                                                   ccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGcc                                     >  2:83361/1‑93 (MQ=255)

                                                    cATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCa                                    <  1:69226/93‑1 (MQ=255)

                                                      tGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGa                                  <  1:1782688/93‑1 (MQ=255)

                                                       gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAt                                 <  1:1741675/93‑1 (MQ=255)

                                                       gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAt                                 <  1:3173597/93‑1 (MQ=255)

                                                       gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGACACTGGATTCTGTCGTTGCTATCAGCCAGAt                                 >  2:376317/1‑93 (MQ=255)

                                                        aaTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAtt                                >  1:4524861/1‑93 (MQ=255)

                                                         aTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTg                               >  2:1705698/1‑93 (MQ=255)

                                                            tCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCtt                            >  2:1269655/1‑93 (MQ=255)

                                                               gATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTCTGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGc                         >  1:710395/1‑93 (MQ=255)

                                                               gATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGc                         <  1:3493589/93‑1 (MQ=255)

                                                                  gCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGa                      <  1:570334/93‑1 (MQ=255)

                                                                    aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAATCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaaa                    >  1:3306062/1‑93 (MQ=255)

                                                                    aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaaa                    >  1:2579807/1‑93 (MQ=255)

                                                                    aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaaa                    <  1:2930968/93‑1 (MQ=255)

                                                                    aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaaa                    <  1:4066087/93‑1 (MQ=255)

                                                                     aaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAg                   >  2:4510659/1‑93 (MQ=255)

                                                                     aaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAg                   >  1:3334410/1‑93 (MQ=255)

                                                                     aaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAg                   <  2:2851940/93‑1 (MQ=255)

                                                                       cATCAGTTTCATCACTCACCCGTCGACGGAAAAACGCAAGCTATCATACTGCATTCTGTCGTTGCTATCAGCCAGCTTGTTTCGCCGcaacag                 >  2:624832/1‑90 (MQ=255)

                                                                       cATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTg                 >  2:4148814/1‑93 (MQ=255)

                                                                        aTCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGc                <  2:907220/93‑1 (MQ=255)

                                                                         tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCa               <  1:1734675/93‑1 (MQ=255)

                                                                          cAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCaa              >  1:4048042/1‑93 (MQ=255)

                                                                          cAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCaa              <  2:2480749/93‑1 (MQ=255)

                                                                           aGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAAt             <  2:1990784/93‑1 (MQ=255)

                                                                           aGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAAt             <  1:1102531/93‑1 (MQ=255)

                                                                           aGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAAt             <  1:2525087/93‑1 (MQ=255)

                                                                           aGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAAt             >  1:4328104/1‑93 (MQ=255)

                                                                           aGTTTCACCACTCTCCCCTCGTCGAAAAAACGTAAGTTATGATACTGGATTCTGTCGTTCCTATCACCCAGATTGCTTCGCCGAAAGTTCAAt             <  2:3384305/93‑1 (MQ=255)

                                                                            gTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATa            <  1:3906326/93‑1 (MQ=255)

                                                                             tttCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaa           <  1:745407/93‑1 (MQ=255)

                                                                             tttCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaa           >  2:1775634/1‑93 (MQ=255)

                                                                              ttCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaa          <  2:3046875/93‑1 (MQ=255)

                                                                               tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa         <  2:1386792/93‑1 (MQ=255)

                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc        <  2:2938080/93‑1 (MQ=255)

                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc        <  1:902018/93‑1 (MQ=255)

                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc        >  2:3977164/1‑93 (MQ=255)

                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc        <  2:2287662/93‑1 (MQ=255)

                                                                                catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGAGCAATAGAAc        >  2:700704/1‑93 (MQ=255)

                                                                                 atcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACg       <  1:2671905/93‑1 (MQ=255)

                                                                                  tcactcacCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGc      >  2:1813275/1‑93 (MQ=255)

                                                                                  tcactcacCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGc      <  2:4080825/93‑1 (MQ=255)

                                                                                  tcactcacCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGc      <  2:1689902/93‑1 (MQ=255)

                                                                                   cactcaccCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCt     <  2:2228393/93‑1 (MQ=255)

                                                                                    actcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTg    >  2:2358819/1‑93 (MQ=255)

                                                                                    actcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTg    <  1:1690703/93‑1 (MQ=255)

                                                                                     ctcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTgg   >  1:536452/1‑93 (MQ=255)

                                                                                      tcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGa  >  1:2336257/1‑93 (MQ=255)

GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGA  >  NC_000913/2417723‑2417901

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`