BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,442,106	A→G	S28S (AGT→AGC)	b2325 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,442,106	0	A	G	100.0%	418.1 / NA	131	S28S (AGT→AGC)	b2325	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (51/80); total (51/80)

Only 100 of 134 total aligned reads displayed.

GCTAACGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCACTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATCTTCTT  >  NC_000913/2442016‑2442195

gCTAACGGTCGTATGCGCCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCt                                                                                         <  2:1380854/93‑1 (MQ=255)

gCTAACGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCt                                                                                         <  2:1001713/93‑1 (MQ=255)

  tAACGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTgg                                                                                       >  2:1212667/1‑93 (MQ=255)

   aaCGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGc                                                                                      >  2:2118020/1‑93 (MQ=255)

       gTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAaac                                                                                  <  2:3830950/93‑1 (MQ=255)

        tCGTATGCACCGCCTGCGCGGAGCGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAaaca                                                                                 >  2:1438237/1‑93 (MQ=255)

            aTGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtc                                                                             >  2:1080751/1‑93 (MQ=255)

            aTGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtc                                                                             >  1:1648994/1‑93 (MQ=255)

               cACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatc                                                                          >  1:2823973/1‑93 (MQ=255)

               cACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatc                                                                          <  1:2260265/93‑1 (MQ=255)

               cACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatc                                                                          >  2:2265450/1‑93 (MQ=255)

                aCCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatca                                                                         <  2:3958721/93‑1 (MQ=255)

                  cGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatcatc                                                                       <  2:1447947/93‑1 (MQ=255)

                  cGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatcatc                                                                       <  1:3948560/93‑1 (MQ=255)

                   gCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACtcatcatca                                                                      >  1:3243360/1‑93 (MQ=255)

                   ccgtGAGCAGAGTGGTCATCGCCAGTTTCCAGTTCTGCGATGGCTAATGTCAGGTGACGACGCAAATACCCGCTGGCAAACAACtcatcatca                                                                      <  2:1080291/90‑1 (MQ=255)

                    ccTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCAc                                                                     <  2:3414162/93‑1 (MQ=255)

                    ccTGAGCGGAGTGGTCATCACCACTGTCCAGTTCTGCGATGGCTAATGTCAGGTGCCCACGCAACTCCCCGCTGGCAAACAACacatcctccc                                                                     <  2:2644939/93‑3 (MQ=255)

                     cTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCCAATACCCGCTGGCAAACAACTCATTATCACt                                                                    >  2:463976/1‑93 (MQ=255)

                     cTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACt                                                                    >  2:569476/1‑93 (MQ=255)

                     cTGAGCGGAGTGGTCATCACCACTTTCCACTTATGCGATGGCTAATGTCAGGTGGCCACCCAAATACCCTCTTGCAAACAACACAACATAACt                                                                    >  2:2853296/1‑93 (MQ=255)

                      tGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTg                                                                   <  2:2522306/93‑1 (MQ=255)

                         gCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCa                                                                <  2:2454615/93‑1 (MQ=255)

                          cGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCAt                                                               <  1:3678386/93‑1 (MQ=255)

                           ggAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATg                                                              >  1:2488129/1‑93 (MQ=255)

                            gAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCCGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATgg                                                             >  1:2513441/1‑93 (MQ=255)

                             aGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGt                                                            <  2:211929/93‑1 (MQ=255)

                               gggTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCGACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCa                                                          <  2:4216915/92‑1 (MQ=255)

                                  tcatcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAAcc                                                       >  2:3669174/1‑93 (MQ=255)

                                  tcatcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAAcc                                                       >  2:360167/1‑93 (MQ=255)

                                  tcatcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAAcc                                                       <  2:2620454/93‑1 (MQ=255)

                                   catcaCCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCa                                                      <  2:1446885/93‑1 (MQ=255)

                                      caccacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATAc                                                   <  2:4456691/93‑1 (MQ=255)

                                      caccacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATAc                                                   <  2:1416197/93‑1 (MQ=255)

                                       cccacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATAcc                                                  <  1:4684514/92‑1 (MQ=255)

                                       accacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATAcc                                                  >  1:1355731/1‑93 (MQ=255)

                                       accacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATAcc                                                  >  1:287663/1‑93 (MQ=255)

                                        ccacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCCACCATACCg                                                 >  2:1521499/1‑93 (MQ=255)

                                        ccacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCg                                                 <  1:560499/93‑1 (MQ=255)

                                         cacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGt                                                <  2:2867576/93‑1 (MQ=255)

                                         cacTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGt                                                <  2:2490748/93‑1 (MQ=255)

                                          acTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTc                                               <  2:3909537/93‑1 (MQ=255)

                                          acTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTc                                               <  1:4489583/93‑1 (MQ=255)

                                          acTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTc                                               <  1:935314/93‑1 (MQ=255)

                                           cTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCg                                              >  2:3222058/1‑93 (MQ=255)

                                           cTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCg                                              >  1:1932190/1‑93 (MQ=255)

                                              tCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGAtt                                           >  2:4057077/1‑93 (MQ=255)

                                               ccAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTa                                          <  2:512281/93‑1 (MQ=255)

                                                cAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTaa                                         >  1:1095499/1‑93 (MQ=255)

                                                cAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTaa                                         <  1:4206655/93‑1 (MQ=255)

                                                cAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTaa                                         >  1:1921229/1‑93 (MQ=255)

                                                     cTGCGATGGCTAATGTCAGGTGGCCACGCAAATCCCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCa                                    <  1:456563/93‑1 (MQ=255)

                                                     cTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACGATACCGTCGAGTAATGCCa                                    <  2:4583894/93‑1 (MQ=255)

                                                     cTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCa                                    <  2:4340237/93‑1 (MQ=255)

                                                     cTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCa                                    <  2:2902527/93‑1 (MQ=255)

                                                       gCGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGa                                  <  1:829087/93‑1 (MQ=255)

                                                        cGATGGCTAATGTCAGGTGGCCACGCAAATCCCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGaa                                 <  1:78208/93‑1 (MQ=255)

                                                        cGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGaa                                 <  1:3017025/93‑1 (MQ=255)

                                                        cGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGaa                                 <  2:2717342/93‑1 (MQ=255)

                                                        cGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGaa                                 <  1:3353053/93‑1 (MQ=255)

                                                        cGATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGaa                                 <  1:4171742/93‑1 (MQ=255)

                                                         gATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAAt                                <  1:3885568/93‑1 (MQ=255)

                                                         gATGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAAt                                >  2:1826203/1‑93 (MQ=255)

                                                          aTGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATg                               >  1:930445/1‑93 (MQ=255)

                                                          aTGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATg                               <  1:3529381/93‑1 (MQ=255)

                                                           tGGCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGc                              <  1:3672374/93‑1 (MQ=255)

                                                            ggCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCg                             >  2:1937620/1‑93 (MQ=255)

                                                             gCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGt                            <  1:3252509/93‑1 (MQ=255)

                                                             gCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGt                            >  2:1420518/1‑93 (MQ=255)

                                                             gCTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGt                            <  2:1214361/93‑1 (MQ=255)

                                                              cTAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTg                           >  1:16922/1‑93 (MQ=255)

                                                               tAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGa                          >  1:2325491/1‑93 (MQ=255)

                                                               tAATGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGa                          >  1:1083561/1‑93 (MQ=255)

                                                                aaTGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGAt                         <  1:3376550/93‑1 (MQ=255)

                                                                aaTGTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGAt                         <  2:1311630/93‑1 (MQ=255)

                                                                   gTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCa                      <  1:4607775/93‑1 (MQ=255)

                                                                   gTCAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCa                      <  1:2279510/93‑1 (MQ=255)

                                                                     cAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCaaa                    >  2:1002849/1‑93 (MQ=255)

                                                                     cAGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCaaa                    <  1:1978107/93‑1 (MQ=255)

                                                                      aGGTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAAc                   <  2:2007153/93‑1 (MQ=255)

                                                                       ggTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACt                  >  1:1778953/1‑93 (MQ=255)

                                                                        gTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTc                 <  2:1796656/93‑1 (MQ=255)

                                                                        gTGGCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTc                 >  1:1550244/1‑93 (MQ=255)

                                                                          ggCCACGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCcg               <  2:114612/93‑1 (MQ=255)

                                                                              aCGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGat           <  1:881694/93‑1 (MQ=255)

                                                                              aCGCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGat           >  2:345906/1‑93 (MQ=255)

                                                                                gCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGatca         <  1:457641/93‑1 (MQ=255)

                                                                                gCAAATACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGatca         <  2:410455/93‑1 (MQ=255)

                                                                                  aaaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATCCCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGatcatc       <  2:2007315/93‑1 (MQ=255)

                                                                                  aaaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGatcatc       >  1:613158/1‑93 (MQ=255)

                                                                                  aaaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGatcatc       <  1:2751460/93‑1 (MQ=255)

                                                                                   aaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtct      >  1:2085459/1‑93 (MQ=255)

                                                                                   aaTACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtct      >  1:804048/1‑93 (MQ=255)

                                                                                     tACCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtcttc    <  1:1042897/93‑1 (MQ=255)

                                                                                      aCCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtcttct   <  1:4005807/93‑1 (MQ=255)

                                                                                      aCCCGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtcttct   <  2:3560899/93‑1 (MQ=255)

                                                                                      aCCCGCTGGCAAACAACTCATCATCACTCGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCAtcttct   >  1:2661920/1‑93 (MQ=255)

                                                                                       cccGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATcttctt  <  1:2501659/93‑1 (MQ=255)

                                                                                       cccGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATcttctt  >  2:3520626/1‑93 (MQ=255)

                                                                                       cccGCTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATcttctt  >  2:3520625/1‑93 (MQ=255)

GCTAACGGTCGTATGCACCGCCTGAGCGGAGTGGTCATCACCACTTTCCAGTTCTGCGATGGCTAATGTCAGGTGGCCACGCAAATACCCACTGGCAAACAACTCATCATCACTGGCATGGTCAACCATACCGTCGATTAATGCCAGAATGCGTGATTCAAACTCCGCGATCATCTTCTT  >  NC_000913/2442016‑2442195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`