BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,503,538	G→A	S10S (AGC→AGT)	b2384 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,503,538	0	G	A	99.4%	549.4 / NA	154	S10S (AGC→AGT)	b2384	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (81/72); minor base T (0/1); total (81/73)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 160 total aligned reads displayed.

ATCAAATCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCGCTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTGCGCCTTGC  >  NC_000913/2503448‑2503627

aTCAAATCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCCGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACt                                                                                         >  2:2355488/1‑93 (MQ=255)

 tCAAATCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTc                                                                                        >  1:1880975/1‑93 (MQ=255)

   aaaTCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCaa                                                                                      <  1:2260971/93‑1 (MQ=255)

   aaaTCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCaa                                                                                      <  2:2100373/93‑1 (MQ=255)

    aaTCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAAc                                                                                     <  1:3721263/93‑1 (MQ=255)

    aaTCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAAc                                                                                     >  1:868114/1‑93 (MQ=255)

    aaTCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAAc                                                                                     >  2:2775495/1‑93 (MQ=255)

    aaTCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAAc                                                                                     >  2:1878930/1‑93 (MQ=255)

     aTCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACg                                                                                    >  2:2200461/1‑93 (MQ=255)

      tCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGc                                                                                   <  1:3637646/93‑1 (MQ=255)

      tCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGc                                                                                   >  2:245041/1‑93 (MQ=255)

          aCTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCtttt                                                                               <  2:1489920/93‑1 (MQ=255)

           cttcttTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTa                                                                              >  2:2869316/1‑93 (MQ=255)

            ttcttTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTaa                                                                             >  1:85827/1‑93 (MQ=255)

            ttcttTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTaa                                                                             >  2:4469370/1‑93 (MQ=255)

             tcttTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAAt                                                                            <  2:348974/93‑1 (MQ=255)

              cttTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATa                                                                           <  1:1038579/93‑1 (MQ=255)

              cttTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATa                                                                           <  2:3345805/93‑1 (MQ=255)

              cttTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATa                                                                           <  1:3685516/93‑1 (MQ=255)

              cttTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATa                                                                           >  2:3794372/1‑93 (MQ=255)

               tttttGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAg                                                                          <  1:1075762/93‑1 (MQ=255)

                ttttGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGc                                                                         <  1:3128473/93‑1 (MQ=255)

                 tttGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCg                                                                        <  1:2758007/93‑1 (MQ=255)

                  ttGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGa                                                                       <  2:1523828/93‑1 (MQ=255)

                  ttGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGa                                                                       >  2:2137055/1‑93 (MQ=255)

                  ttGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGa                                                                       <  1:3661273/93‑1 (MQ=255)

                    gCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGCGGAGGCGATCGCCTCTGCCTCACTCAACGGCTTTAATAGCGATa                                                                     >  2:2809449/1‑93 (MQ=255)

                    gCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATa                                                                     <  2:2490117/93‑1 (MQ=255)

                    gCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATa                                                                     <  1:4075968/93‑1 (MQ=255)

                      aGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATaaa                                                                   <  2:2029568/93‑1 (MQ=255)

                      aGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATaaa                                                                   >  2:808136/1‑93 (MQ=255)

                        gCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATc                                                                 <  1:2209527/93‑1 (MQ=255)

                         cGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATcc                                                                >  2:1540001/1‑93 (MQ=255)

                           aTCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCAt                                                              >  2:2679318/1‑93 (MQ=255)

                           aTCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCAt                                                              <  1:1845257/93‑1 (MQ=255)

                           aTCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCAATCAACGCTTTTAATAGCGATAAATCCAt                                                              >  2:1995145/1‑93 (MQ=255)

                            tCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCAtt                                                             >  1:3198171/1‑93 (MQ=255)

                            tCCGCATCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCAtt                                                             >  2:2971444/1‑93 (MQ=255)

                             ccGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTa                                                            <  2:3298550/93‑1 (MQ=255)

                             ccGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTa                                                            <  1:1329769/93‑1 (MQ=255)

                             ccGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTa                                                            <  1:1549570/93‑1 (MQ=255)

                               gCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATg                                                          >  1:4118588/1‑93 (MQ=255)

                                 ttcttcCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGcc                                                        <  2:4220687/93‑1 (MQ=255)

                                 ttcttcCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGcc                                                        >  2:2054026/1‑93 (MQ=255)

                                 ttcttcCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGcc                                                        <  1:3898834/93‑1 (MQ=255)

                                  tcttcCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCct                                                       >  1:2766531/1‑93 (MQ=255)

                                    ttcCATCAGGATCTTCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCctct                                                     <  2:3084007/93‑1 (MQ=255)

                                     tcCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCtctc                                                    <  1:4423871/93‑1 (MQ=255)

                                      ccAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTcc                                                   <  2:3917581/93‑1 (MQ=255)

                                      ccAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTcc                                                   >  2:1876736/1‑93 (MQ=255)

                                       cagcagGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTccc                                                  <  2:3999284/93‑1 (MQ=255)

                                       cagcagGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTccc                                                  <  1:1420428/93‑1 (MQ=255)

                                          cagGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTg                                               >  1:2593800/1‑93 (MQ=255)

                                           agGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGa                                              >  1:3957848/1‑93 (MQ=255)

                                           agGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGa                                              <  1:1850990/93‑1 (MQ=255)

                                            ggATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAg                                             >  2:1774095/1‑93 (MQ=255)

                                            ggATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAg                                             >  1:2698318/1‑93 (MQ=255)

                                            ggATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAg                                             >  1:2342349/1‑93 (MQ=255)

                                            ggATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCGGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAg                                             >  2:3826144/1‑93 (MQ=255)

                                             gATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGc                                            >  1:536044/1‑93 (MQ=255)

                                              aTCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCa                                           <  1:4459480/93‑1 (MQ=255)

                                                  gCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAacac                                       <  1:1292894/93‑1 (MQ=255)

                                                    cGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTg                                     <  1:2079008/93‑1 (MQ=255)

                                                    cGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTg                                     <  1:3851861/93‑1 (MQ=255)

                                                     gCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCCACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGt                                    >  2:726853/1‑93 (MQ=255)

                                                     gCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGt                                    >  2:3074547/1‑93 (MQ=255)

                                                     gCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGt                                    >  1:1675147/1‑93 (MQ=255)

                                                        cTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGtttt                                 >  2:369842/1‑93 (MQ=255)

                                                        cTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGtttt                                 <  2:1765946/93‑1 (MQ=255)

                                                           ccTGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCgg                              <  1:4291216/93‑1 (MQ=255)

                                                             tGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCa                            >  1:2733472/1‑93 (MQ=255)

                                                             tGTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCa                            <  1:4568545/93‑1 (MQ=255)

                                                              gTTCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCAt                           >  2:1218660/1‑93 (MQ=255)

                                                               ttCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATg                          <  2:875447/93‑1 (MQ=255)

                                                               ttCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATg                          >  1:1665264/1‑93 (MQ=255)

                                                               ttCCGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATg                          >  1:3744282/1‑93 (MQ=255)

                                                                 ccGAGGAGGCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGc                        <  2:5132/93‑1 (MQ=255)

                                                                      gaggCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTaga                   <  2:410125/93‑1 (MQ=255)

                                                                      gaggCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTaga                   <  2:2287673/93‑1 (MQ=255)

                                                                      gaggCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTaga                   >  2:1240801/1‑93 (MQ=255)

                                                                        ggCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGc                 <  1:1716537/93‑1 (MQ=255)

                                                                        ggCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGc                 <  1:1001287/93‑1 (MQ=255)

                                                                         gCGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCa                <  1:3417505/93‑1 (MQ=255)

                                                                          cGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCAc               <  2:4283530/93‑1 (MQ=255)

                                                                          cGATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCAc               <  2:1316803/93‑1 (MQ=255)

                                                                           gATCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACt              <  1:1695070/93‑1 (MQ=255)

                                                                            aTCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACtt             >  2:4245192/1‑93 (MQ=255)

                                                                            aTCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACtt             >  1:4119817/1‑93 (MQ=255)

                                                                             tCGCATCTGCCTCTCTCAACGCTTTTAATAGCGATAAAGCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTc            <  1:3368653/93‑1 (MQ=255)

                                                                             tCGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTc            <  2:3388810/93‑1 (MQ=255)

                                                                              cGCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCt           >  1:3856756/1‑93 (MQ=255)

                                                                               gCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTg          >  1:1018864/1‑93 (MQ=255)

                                                                               gCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTg          >  2:1588578/1‑93 (MQ=255)

                                                                               gCATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTg          >  1:2264436/1‑93 (MQ=255)

                                                                                cATCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTgc         <  2:104832/93‑1 (MQ=255)

                                                                                 aTCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGGTTTCGGCATGGCGTAGAGCACTTCTgcg        >  2:1728073/1‑93 (MQ=255)

                                                                                  tCTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTgcgc       >  2:2519830/1‑93 (MQ=255)

                                                                                   cTGCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTGCGcc      >  1:736918/1‑93 (MQ=255)

                                                                                     gCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTGCGCCtt    >  1:960968/1‑93 (MQ=255)

                                                                                     gCCTCACTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTGCGCCtt    <  1:3957926/93‑1 (MQ=255)

ATCAAATCGCACTTCTTTTTGCAGGCGATCCGCTTCTTCCAGCAGGATCTGCCGCACTTCCTGTTCCGAGGAGGCGATCGCATCTGCCTCGCTCAACGCTTTTAATAGCGATAAATCCATTATGCCTCTCCCGTGAGCAACACTGTTTTCGGCATGGCGTAGAGCACTTCTGCGCCTTGC  >  NC_000913/2503448‑2503627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`