BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,590,989	T→C	intergenic (+7/+103)	b4537 → / ← ypfH	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,590,989	0	T	C	100.0%	550.8 / NA	175	intergenic (+7/+103)	b4537/ypfH	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (92/83); total (92/83)

Only 100 of 178 total aligned reads displayed.

CCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCA  >  NC_000913/2590899‑2591078

 cGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCt                                                                                        <  2:3158581/93‑1 (MQ=255)

 cGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCt                                                                                        <  2:2196074/93‑1 (MQ=255)

     gCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAAc                                                                                    >  1:2623506/1‑93 (MQ=255)

       ttCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCg                                                                                  >  1:4396195/1‑93 (MQ=255)

       ttCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCg                                                                                  >  2:499769/1‑93 (MQ=255)

         cccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                <  1:720379/93‑1 (MQ=255)

         cccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTa                                                                                <  2:406333/93‑1 (MQ=255)

          ccccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAg                                                                               <  1:2768145/93‑1 (MQ=255)

          ccccGCATCGTGATTTCAAAGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAg                                                                               >  2:4570851/1‑93 (MQ=255)

           cccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAgg                                                                              >  2:3265428/1‑93 (MQ=255)

           cccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAgg                                                                              >  1:3884705/1‑93 (MQ=255)

           cccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAgg                                                                              >  2:1132008/1‑93 (MQ=255)

            ccGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGc                                                                             >  1:4627124/1‑93 (MQ=255)

              gCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCg                                                                           <  1:1248007/93‑1 (MQ=255)

                aTCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGa                                                                         >  2:4044790/1‑93 (MQ=255)

                aTCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGa                                                                         >  1:3424755/1‑93 (MQ=255)

                 tCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGAt                                                                        >  1:86469/1‑93 (MQ=255)

                 tCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGAt                                                                        <  2:1379814/93‑1 (MQ=255)

                   gTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATaa                                                                      >  1:4251571/1‑93 (MQ=255)

                   gTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATaa                                                                      >  1:1117563/1‑93 (MQ=255)

                    tGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAg                                                                     >  2:3260051/1‑93 (MQ=255)

                    tGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAg                                                                     <  2:933518/93‑1 (MQ=255)

                    tGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAg                                                                     <  1:4130883/93‑1 (MQ=255)

                     gATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAgg                                                                    >  2:3663383/1‑93 (MQ=255)

                      aTTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGc                                                                   <  2:3126354/93‑1 (MQ=255)

                      aTTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGc                                                                   <  2:1057785/93‑1 (MQ=255)

                      aTTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGc                                                                   >  2:329214/1‑93 (MQ=255)

                       tttCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCg                                                                  <  1:3601568/93‑1 (MQ=255)

                         tCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGtt                                                                <  2:2582487/93‑1 (MQ=255)

                           aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTaa                                                              >  2:1708530/1‑93 (MQ=255)

                           aaCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTaa                                                              <  2:1310972/93‑1 (MQ=255)

                            aCGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAc                                                             <  2:3610439/93‑1 (MQ=255)

                              gATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgc                                                           >  1:3019741/1‑93 (MQ=255)

                                tAAGTGGGCCGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgccg                                                         >  2:4560935/1‑93 (MQ=255)

                                tAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAAcgccg                                                         <  1:209142/93‑1 (MQ=255)

                                  aGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCa                                                       <  2:764113/93‑1 (MQ=255)

                                   gTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCAt                                                      >  2:713910/1‑93 (MQ=255)

                                      ggACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCg                                                   >  1:4089101/1‑93 (MQ=255)

                                           aTGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAt                                              >  2:3015402/1‑93 (MQ=255)

                                           aTGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAAt                                              <  2:4382980/93‑1 (MQ=255)

                                             gacgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATgg                                            <  2:3875099/93‑1 (MQ=255)

                                              acgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGt                                           <  1:3957057/93‑1 (MQ=255)

                                              acgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGt                                           <  2:2064457/93‑1 (MQ=255)

                                               cgacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTg                                          <  2:1680078/93‑1 (MQ=255)

                                                gacgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGa                                         <  2:3625437/93‑1 (MQ=255)

                                                 acgacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGaa                                        <  1:2887372/93‑1 (MQ=255)

                                                   gacTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACg                                      >  2:4284449/1‑93 (MQ=255)

                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     >  2:4174740/1‑93 (MQ=255)

                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     <  2:96456/93‑1 (MQ=255)

                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     <  1:1706435/93‑1 (MQ=255)

                                                    acTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGa                                     >  1:2094548/1‑93 (MQ=255)

                                                     cTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGAt                                    >  1:2442275/1‑93 (MQ=255)

                                                      tGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATg                                   >  1:2312642/1‑93 (MQ=255)

                                                       ggCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGc                                  >  1:3812902/1‑93 (MQ=255)

                                                       ggCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGc                                  >  1:653753/1‑93 (MQ=255)

                                                        gcgaaaaagGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGcc                                 <  1:2559837/89‑1 (MQ=37)

                                                          cGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTg                               >  2:354872/1‑93 (MQ=255)

                                                          cGAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTg                               >  2:3431679/1‑93 (MQ=255)

                                                           gAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGa                              >  2:116357/1‑93 (MQ=255)

                                                           gAAAAAGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGa                              <  2:2258596/93‑1 (MQ=255)

                                                            aaaaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGag                             >  1:1635752/1‑92 (MQ=255)

                                                              aaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGc                           <  2:3922643/93‑1 (MQ=255)

                                                              aaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGc                           >  2:917801/1‑93 (MQ=255)

                                                              aaaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGc                           <  1:2540527/93‑1 (MQ=255)

                                                               aaGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCg                          >  2:1318530/1‑93 (MQ=255)

                                                                aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCgg                         >  2:855561/1‑92 (MQ=255)

                                                                aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         <  1:664105/93‑1 (MQ=255)

                                                                aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         >  2:2495712/1‑93 (MQ=255)

                                                                aGGATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGa                         <  1:4194975/93‑1 (MQ=255)

                                                                 ggATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCCATGGTGAACGATGCCTGATGCGAc                        >  2:845560/1‑93 (MQ=255)

                                                                 ggATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                        >  1:899105/1‑93 (MQ=255)

                                                                 ggATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGAc                        <  2:4081743/93‑1 (MQ=255)

                                                                  gATCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACg                       >  1:762851/1‑93 (MQ=255)

                                                                   aTCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGc                      >  1:4068232/1‑93 (MQ=255)

                                                                   aTCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGc                      <  2:119319/93‑1 (MQ=255)

                                                                    tCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCt                     >  1:1760005/1‑93 (MQ=255)

                                                                    tCAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCt                     <  1:3121128/93‑1 (MQ=255)

                                                                     cAACCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTc                    >  2:2371649/1‑93 (MQ=255)

                                                                      aaCCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCa                   >  2:396900/1‑93 (MQ=255)

                                                                      aaCCGAAGAAGTAAGCGGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCAGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCa                   <  2:4278392/93‑1 (MQ=255)

                                                                       aCCGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAc                  >  2:2900475/1‑93 (MQ=255)

                                                                         cGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgc                <  1:1071634/93‑1 (MQ=255)

                                                                         cGAAGAAGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgc                >  1:2834071/1‑93 (MQ=255)

                                                                         cGAAGAAGTAAGCTGAGCGCTCAACCGTAGGACGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGGGACGCTCAcgc                >  2:1028875/1‑93 (MQ=255)

                                                                          gaagaaGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgcg               >  2:135143/1‑93 (MQ=255)

                                                                          gaagaaGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgcg               >  2:1435968/1‑93 (MQ=255)

                                                                          gaagaaGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgcg               >  2:3562648/1‑93 (MQ=255)

                                                                          gaagaaGTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAcgcg               >  2:1840136/1‑93 (MQ=255)

                                                                            agaagTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTc             <  2:2021286/93‑1 (MQ=255)

                                                                               agTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTa          <  2:1730122/93‑1 (MQ=255)

                                                                                gTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTAt         <  1:1850513/93‑1 (MQ=255)

                                                                                gTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTAt         >  1:513209/1‑93 (MQ=255)

                                                                                gTAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACACCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAAGCGTCTTAt         >  1:884375/1‑93 (MQ=255)

                                                                                 tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        <  1:4229812/93‑1 (MQ=255)

                                                                                 tAAGCTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATc        >  2:3821983/1‑93 (MQ=255)

                                                                                 gcaGCTGCGTGGTCAACCTTAGGACCGATAAGGCGTTAACGCCGCATGCGGCAATGGTGAACGATGCCTGATGCGTCGCTCACGCGTCTTATc        <  2:4250965/91‑1 (MQ=18)

                                                                                     cTGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGc    <  1:3233872/93‑1 (MQ=255)

                                                                                      tGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAggtc   >  1:1492035/1‑91 (MQ=255)

                                                                                      tGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc   >  1:1945163/1‑93 (MQ=255)

                                                                                      tGAGCGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc   >  2:450540/1‑93 (MQ=255)

CCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCA  >  NC_000913/2590899‑2591078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`