BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,647,298	T→C	T1004A (ACG→GCG)	b2520 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,647,298	0	T	C	100.0%	513.8 / NA	164	T1004A (ACG→GCG)	b2520	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (92/72); total (92/72)

Only 100 of 175 total aligned reads displayed.

CACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCG  >  NC_000913/2647208‑2647387

 aCTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCa                                                                                        <  2:3045132/93‑1 (MQ=255)

      ccATAAAGCGTGGCATGTTCAGTTCAGCAATAACCGGTGCGGCAACTATCACTTTACTTCTGTTGCTACCGAAGACAGCTGCCCCCCGGGCtt                                                                                   >  2:3700635/1‑93 (MQ=255)

      ccATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCtt                                                                                   >  1:328223/1‑93 (MQ=255)

      ccATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCtt                                                                                   >  2:3700636/1‑93 (MQ=255)

      ccATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCtt                                                                                   <  2:3626349/93‑1 (MQ=255)

       cATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCTCAGGCTTg                                                                                  >  1:3609105/1‑93 (MQ=255)

        aTAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTgc                                                                                 >  2:2389866/1‑93 (MQ=255)

         tAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTgcg                                                                                >  2:3455667/1‑93 (MQ=255)

          aaaGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTgcgc                                                                               <  2:2278959/93‑1 (MQ=255)

          aaaGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTgcgc                                                                               <  2:1958151/93‑1 (MQ=255)

            aGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCa                                                                             <  1:3554263/93‑1 (MQ=255)

               gcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCCCTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGa                                                                          <  1:3091620/93‑1 (MQ=255)

               gcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGa                                                                          <  1:1380619/93‑1 (MQ=255)

               gcgGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGa                                                                          >  1:3888942/1‑93 (MQ=255)

                 ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcg                                                                        >  2:695810/1‑93 (MQ=255)

                 ggCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcg                                                                        >  1:1365146/1‑93 (MQ=255)

                  gCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcgc                                                                       <  1:2080969/93‑1 (MQ=255)

                  gCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcgc                                                                       >  2:1508956/1‑93 (MQ=255)

                   cATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGAcgcg                                                                      >  1:3774447/1‑93 (MQ=255)

                    aTGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACgcgc                                                                     >  1:3688564/1‑93 (MQ=255)

                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    >  2:942763/1‑93 (MQ=255)

                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    >  1:635101/1‑93 (MQ=255)

                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    >  1:2550330/1‑93 (MQ=255)

                     tGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCa                                                                    >  2:2446811/1‑93 (MQ=255)

                      gttcagttcaGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCaa                                                                   >  1:2312599/1‑93 (MQ=255)

                      gttcagttcaGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCaa                                                                   <  1:1240375/93‑1 (MQ=255)

                       ttcagttcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAt                                                                  <  1:1066563/93‑1 (MQ=255)

                       ttcagtacagCAATCACCGGTGCTGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAAt                                                                  <  2:4200230/93‑1 (MQ=255)

                             tcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCg                                                            >  2:1746621/1‑93 (MQ=255)

                             tcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCg                                                            <  1:4018602/93‑1 (MQ=255)

                             tcagCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCg                                                            <  2:3774997/93‑1 (MQ=255)

                                  aaTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaa                                                       >  1:889581/1‑93 (MQ=255)

                                  aaTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaa                                                       >  1:4145598/1‑93 (MQ=255)

                                   aTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaaa                                                      >  2:647531/1‑93 (MQ=255)

                                   aTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaaa                                                      <  2:4065033/93‑1 (MQ=255)

                                   aTCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTaaaa                                                      >  1:4472089/1‑93 (MQ=255)

                                       ccGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGc                                                  <  1:4528256/93‑1 (MQ=255)

                                       ccGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGc                                                  >  2:3337313/1‑93 (MQ=255)

                                          gTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCaa                                               >  2:4270145/1‑93 (MQ=255)

                                          gTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCaa                                               >  1:1579775/1‑93 (MQ=255)

                                          gTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCaa                                               <  1:1619828/93‑1 (MQ=255)

                                           tGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGGGCAATTCACCGTTAAAATCGCCAAt                                              <  2:4672130/93‑1 (MQ=255)

                                           tGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAAt                                              <  2:1340738/93‑1 (MQ=255)

                                           ggCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCTAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAAt                                              <  1:1844052/92‑1 (MQ=255)

                                            gCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATc                                             <  1:4233780/93‑1 (MQ=255)

                                               gCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGc                                          >  2:2622987/1‑93 (MQ=255)

                                               gCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGc                                          >  2:3114919/1‑93 (MQ=255)

                                                 aaCTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAg                                        <  1:2241638/93‑1 (MQ=255)

                                                 aaCTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAg                                        >  1:1731072/1‑93 (MQ=255)

                                                  aCTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgt                                       >  2:3288007/1‑93 (MQ=255)

                                                  aCTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgt                                       >  2:3728525/1‑93 (MQ=255)

                                                   cTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgtg                                      >  1:946260/1‑93 (MQ=255)

                                                   cTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgtg                                      >  1:2872331/1‑93 (MQ=255)

                                                    tATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAgtgt                                     >  1:4578600/1‑93 (MQ=255)

                                                      tCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTaa                                   >  1:150170/1‑93 (MQ=255)

                                                      tCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTaa                                   >  1:3372463/1‑93 (MQ=255)

                                                       cACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAc                                  >  1:576311/1‑93 (MQ=255)

                                                        actttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAcc                                 >  1:1659662/1‑93 (MQ=255)

                                                        actttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAcc                                 >  1:129087/1‑93 (MQ=255)

                                                        actttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAcc                                 >  1:2027626/1‑93 (MQ=255)

                                                        actttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAAcc                                 <  2:1877124/93‑1 (MQ=255)

                                                         ctttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCg                                >  1:1718894/1‑93 (MQ=255)

                                                         ctttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACCCGCAATTCACCGCTAAAATCGCCAATCGGCAGTGTAAcca                                >  2:3983465/1‑92 (MQ=255)

                                                          tttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGa                               >  1:1750793/1‑93 (MQ=255)

                                                          tttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGa                               <  2:3595938/93‑1 (MQ=255)

                                                          tttactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGa                               <  2:2716674/93‑1 (MQ=255)

                                                            tactttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGc                             <  1:666703/93‑1 (MQ=255)

                                                             actttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGcg                            >  2:543273/1‑92 (MQ=255)

                                                             actttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGcc                            >  1:977160/1‑93 (MQ=255)

                                                             actttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGcc                            <  1:2842557/93‑1 (MQ=255)

                                                             actttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGcc                            >  2:2809851/1‑93 (MQ=255)

                                                               tttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCtt                          <  2:924399/93‑1 (MQ=255)

                                                               tttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCAGGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCtt                          >  1:3299061/1‑93 (MQ=255)

                                                                ttCGTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTc                         <  2:3544840/93‑1 (MQ=255)

                                                                   gTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGcc                      >  2:4521617/1‑93 (MQ=255)

                                                                   gTTGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGcc                      >  1:3536543/1‑93 (MQ=255)

                                                                    ttGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc                     <  1:265157/93‑1 (MQ=255)

                                                                    ttGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc                     >  2:1518833/1‑93 (MQ=255)

                                                                    ttGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGccc                     <  2:3340655/93‑1 (MQ=255)

                                                                     tGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCt                    <  1:3816959/93‑1 (MQ=255)

                                                                     tGCTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCt                    <  1:2550431/93‑1 (MQ=255)

                                                                       cTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGt                  >  1:2782222/1‑93 (MQ=255)

                                                                       cTACCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGt                  <  1:2690314/93‑1 (MQ=255)

                                                                         aCCGAAGTCATCTGCCGCGCAGGTTTGCGCCATGACGCGCATTTCACCGTTAAAATCGCGAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTc                <  2:1652822/93‑1 (MQ=255)

                                                                         aCCGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTc                >  1:1224616/1‑93 (MQ=255)

                                                                           cGAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGt              <  2:3210654/93‑1 (MQ=255)

                                                                            gAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGtt             >  1:760042/1‑93 (MQ=255)

                                                                            gAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGtt             >  2:3487988/1‑93 (MQ=255)

                                                                            gAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGtt             >  2:2906630/1‑93 (MQ=255)

                                                                            gAAGTCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGtt             >  1:520295/1‑93 (MQ=255)

                                                                                tCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGc         <  1:1981209/93‑1 (MQ=255)

                                                                                tCATCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTCAGc         >  1:1125423/1‑93 (MQ=255)

                                                                                  aTCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGt       <  2:297512/93‑1 (MQ=255)

                                                                                  aTCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGt       >  2:4629643/1‑93 (MQ=255)

                                                                                   tCTGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGtt      >  2:3553018/1‑93 (MQ=255)

                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAc    <  2:2800243/93‑1 (MQ=255)

                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAc    <  2:2228137/93‑1 (MQ=255)

                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAc    <  2:106870/93‑1 (MQ=255)

                                                                                     tGCCGCCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAc    <  1:4310331/93‑1 (MQ=255)

                                                                                      gccgccCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTAcc   <  1:3403745/93‑1 (MQ=255)

CACTCGCCATAAAGCGCGGCATGTTCAGTTCAGCAATCACCGGTGCGGCAACTATCACTTTACTTTCGTTGCTACCGAAGTCATCTGCCGTCCAGGCTTGCGCCATGACGCGCAATTCACCGTTAAAATCGCCAATCGGCAGTGTAACCGAGCCTTCGCCCTGTTCGTTGAGCGTTACCG  >  NC_000913/2647208‑2647387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`