BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,669,800	T→C	C186R (TGT→CGT)	hcaB →	2,3‑dihydroxy‑2,3‑dihydrophenylpropionate dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,669,800	0	T	C	100.0%	460.4 / NA	149	C186R (TGT→CGT)	hcaB	2,3‑dihydroxy‑2,3‑dihydrophenylpropionate dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (80/69); total (80/69)

Only 100 of 157 total aligned reads displayed.

TGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCC  >  NC_000913/2669708‑2669889

    cacCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTgg                                                                                       >  2:2079004/1‑93 (MQ=255)

    cacCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTgg                                                                                       >  2:1816921/1‑93 (MQ=255)

     acCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGGCCGCGTGGt                                                                                      >  2:2304063/1‑93 (MQ=255)

      ccGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTa                                                                                     >  1:1671330/1‑93 (MQ=255)

        gCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATg                                                                                   >  2:1281002/1‑93 (MQ=255)

        cccAGAAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGTTGAATGGCGTCGGCCCGCGTGGTATg                                                                                   <  2:1605270/92‑1 (MQ=255)

          cAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGc                                                                                 <  2:1072628/93‑1 (MQ=255)

           aGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGcc                                                                                >  1:3327793/1‑93 (MQ=255)

           aGTAAACATGCCGCAACCCGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGcc                                                                                <  2:774307/93‑1 (MQ=255)

            gTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCa                                                                               >  1:885144/1‑93 (MQ=255)

               aaCATGCCGCAACCGGACTTATACGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCg                                                                            >  1:3782609/1‑93 (MQ=255)

                aCATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCgc                                                                           >  1:4081453/1‑92 (MQ=255)

                 cATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGAc                                                                          <  2:2116277/93‑1 (MQ=255)

                 cATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGAc                                                                          >  1:1298395/1‑93 (MQ=255)

                 cATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGAc                                                                          >  2:3671502/1‑93 (MQ=255)

                  aTGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGAcc                                                                         >  2:941256/1‑93 (MQ=255)

                  aTGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGAcc                                                                         <  1:2173129/93‑1 (MQ=255)

                   tGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCt                                                                        >  1:3107103/1‑93 (MQ=255)

                   tGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCt                                                                        <  1:3554776/93‑1 (MQ=255)

                       gCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTgcgc                                                                    <  1:2582972/93‑1 (MQ=255)

                       gCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGACCGCGTGGTATGGCCAGCGACCTgcgc                                                                    >  1:4357157/1‑93 (MQ=255)

                         aaCCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGGATGGCCAGCGCCCTGCGCgg                                                                  >  2:3802317/1‑93 (MQ=255)

                             ggACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCca                                                              >  1:4506758/1‑93 (MQ=255)

                             ggACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCca                                                              >  1:4154541/1‑93 (MQ=255)

                               aCTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCcaca                                                            >  1:1598599/1‑93 (MQ=255)

                                cTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCAACAg                                                           >  2:801433/1‑93 (MQ=255)

                                 ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAgg                                                          <  1:328174/93‑1 (MQ=255)

                                 ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAgg                                                          >  1:1401123/1‑93 (MQ=255)

                                  tATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGgc                                                         >  1:3684351/1‑93 (MQ=255)

                                    ttCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGgcgc                                                       <  1:1733667/93‑1 (MQ=255)

                                       gCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCg                                                    >  2:1134352/1‑93 (MQ=255)

                                       gCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCg                                                    >  2:3091755/1‑93 (MQ=255)

                                        ccAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCgg                                                   >  2:183189/1‑93 (MQ=255)

                                        ccAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCgg                                                   <  1:1228487/93‑1 (MQ=255)

                                         cAACTGGCTTATGAACTGGCACCGAAAGCGCGGGGGAAGGGCGTCGGCCCGCGTGGTATGGGCAGCGACCTGCGCGGCCCGCGGGCGCTCggg                                                  >  2:1209595/1‑93 (MQ=255)

                                          aaCTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGc                                                 >  1:3969995/1‑93 (MQ=255)

                                           aCTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCa                                                >  2:3920126/1‑93 (MQ=255)

                                           aCTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCa                                                <  2:1476700/93‑1 (MQ=255)

                                             tgtcTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCaaa                                              <  1:415471/90‑1 (MQ=255)

                                             tGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCaaa                                              >  1:2205999/1‑93 (MQ=255)

                                               gCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGt                                            <  1:4140795/93‑1 (MQ=255)

                                               gCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGt                                            <  2:3392436/93‑1 (MQ=255)

                                                cTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCCCAGGCGCTCGGGCAAAGTg                                           >  1:29251/1‑93 (MQ=255)

                                                cTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGtc                                           >  2:516225/1‑92 (MQ=255)

                                                cTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTg                                           >  1:2053184/1‑93 (MQ=255)

                                                  tATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCCGGCAAAGTGaa                                         >  2:335821/1‑93 (MQ=255)

                                                   aTGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGaaa                                        <  1:1190940/93‑1 (MQ=255)

                                                    tGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAAc                                       >  2:4229361/1‑93 (MQ=255)

                                                     gAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAAcc                                      <  1:1192524/93‑1 (MQ=255)

                                                     gAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAAcc                                      <  1:3662436/93‑1 (MQ=255)

                                                       aCTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTc                                    <  1:1825086/93‑1 (MQ=255)

                                                        cTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCg                                   >  2:2577734/1‑93 (MQ=255)

                                                        cTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCg                                   >  1:4600340/1‑93 (MQ=255)

                                                         tGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGa                                  <  1:736702/93‑1 (MQ=255)

                                                          ggCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGAt                                 <  1:2607937/93‑1 (MQ=255)

                                                          ggCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGAt                                 <  1:4346855/93‑1 (MQ=255)

                                                            cACCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCGCGGGCAAAGTGAAACCTCGATaa                               <  2:2346633/93‑1 (MQ=255)

                                                             aCCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCCAAGTGAAACCTCGATAAt                              >  1:3443826/1‑93 (MQ=255)

                                                             aCCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAAt                              <  1:1459018/93‑1 (MQ=255)

                                                             aCCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAAt                              <  1:168503/93‑1 (MQ=255)

                                                             aCCGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGCCAAAGTGAAACCTCGATAAt                              <  2:2666051/93‑1 (MQ=255)

                                                               cGAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGc                            <  1:890694/93‑1 (MQ=255)

                                                                gAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCa                           <  2:2713310/93‑1 (MQ=255)

                                                                gAAAGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCa                           <  2:1077685/93‑1 (MQ=255)

                                                                caaaGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCa                           <  2:2676342/92‑1 (MQ=255)

                                                                 aaaGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAg                          >  1:3312247/1‑93 (MQ=255)

                                                                 aaaGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAg                          >  1:1856433/1‑93 (MQ=255)

                                                                 aaaGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAg                          >  1:3502329/1‑93 (MQ=255)

                                                                  aaGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGt                         <  2:2656537/93‑1 (MQ=255)

                                                                   aGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtc                        <  2:160649/93‑1 (MQ=255)

                                                                   aGTGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtc                        <  2:2732842/93‑1 (MQ=255)

                                                                     tGCGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtctc                      <  2:1539802/93‑1 (MQ=255)

                                                                     tGCGGGTGAAGGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtctc                      <  2:453731/93‑1 (MQ=255)

                                                                       cGGGTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTg                    <  1:4431765/93‑1 (MQ=255)

                                                                        gggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGa                   <  2:147918/93‑1 (MQ=255)

                                                                        gggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGa                   <  2:1204627/93‑1 (MQ=255)

                                                                        gggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGa                   <  1:3810021/93‑1 (MQ=255)

                                                                        gggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGa                   <  2:504509/93‑1 (MQ=255)

                                                                         ggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAc                  >  2:3886711/1‑93 (MQ=255)

                                                                         ggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAc                  >  1:909710/1‑93 (MQ=255)

                                                                         ggTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAc                  <  2:2875951/93‑1 (MQ=255)

                                                                          gTGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACg                 <  2:751096/93‑1 (MQ=255)

                                                                           tGAATGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCCCAGGCGCTCGGGCAAAATGAAACCTCGATAATGCAGTCTCTGACGc                >  2:2894945/1‑93 (MQ=255)

                                                                             aaTGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCg              <  1:174330/93‑1 (MQ=255)

                                                                               tGGCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGga            <  2:4058673/93‑1 (MQ=255)

                                                                               gggCGTCGGCCCGCGTGATATGGCCTGCGACCCGCGCGCCCCACAGGCGCTCGGGCAAAGAGAAACCTCGATAATGCAGTCTCTGACGCCGga            <  2:4204409/92‑1 (MQ=255)

                                                                                 gCGTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTTTGACGCCGgaga          >  2:11354/1‑93 (MQ=255)

                                                                                   gTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGGGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGaaa        >  1:3728646/1‑93 (MQ=255)

                                                                                   gTCGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAAGCCGGAGaaa        >  2:195926/1‑93 (MQ=255)

                                                                                    gcGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGaaaa       <  1:1018927/92‑1 (MQ=255)

                                                                                     cGGCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAAt      <  2:2824071/93‑1 (MQ=255)

                                                                                     cGGCCCGCGTAGTATGGCCAGCGACGTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCGGACGCCGGAGAAAAt      <  2:3075734/93‑1 (MQ=255)

                                                                                      ggCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAAtt     >  2:1862196/1‑93 (MQ=255)

                                                                                      ggCCCGCGTGGGAGGGCCAGCCACCTGCGCGGCCCACAGGCGCTCGGGCAAAGGGAAACCTCGATAATGCAGGCTCTGACGCCGGAGAAAAtt     <  2:1506227/93‑1 (MQ=255)

                                                                                       gCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTg    >  1:3732091/1‑93 (MQ=255)

                                                                                       gCCCGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTg    >  1:3002356/1‑93 (MQ=255)

                                                                                        cccGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTgc   <  1:677217/93‑1 (MQ=255)

                                                                                        cccGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTgc   <  2:827927/93‑1 (MQ=255)

                                                                                         ccGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTggc  >  1:3250616/1‑91 (MQ=255)

                                                                                         ccGCGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGGGAAACCTCGATAATGAAGTCTCTAACGCCGGAGAAAATTgcg  >  1:1066970/1‑92 (MQ=255)

TGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCC  >  NC_000913/2669708‑2669889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`