BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,681,547	T→C	V222A (GTG→GCG)	b2550 →	putative NAGC‑like transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,681,547	0	T	C	100.0%	296.9 / NA	96	V222A (GTG→GCG)	b2550	putative NAGC‑like transcriptional regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (48/48); total (48/48)

Only 100 of 123 total aligned reads displayed.

TGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACT  >  NC_000913/2681457‑2681636

tGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGa                                                                                         <  2:1333354/93‑1 (MQ=255)

tGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGa                                                                                         >  2:4647252/1‑93 (MQ=255)

 gctggcgctggcGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGAt                                                                                        >  2:1643791/1‑93 (MQ=255)

  ctggcgctggcgGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGAtt                                                                                       >  2:1125833/1‑93 (MQ=255)

   tggcgctggcgGAGAAATGGCAAAATAATTCGCAGGAACGGGAGTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCCGCGTTCGCGATTa                                                                                      >  2:1721065/1‑93 (MQ=255)

    ggcgctggcgGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTaa                                                                                     <  1:1656397/93‑1 (MQ=255)

    ggcgctggcgGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTaa                                                                                     <  1:1818913/93‑1 (MQ=255)

     gcgctggcgGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAAc                                                                                    <  2:3544738/93‑1 (MQ=255)

       gctggcgGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGa                                                                                  <  2:844644/93‑1 (MQ=255)

       gctggcgGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGa                                                                                  <  1:3191748/93‑1 (MQ=255)

            cgGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCaaa                                                                             <  1:1288506/93‑1 (MQ=255)

            cgGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCaaa                                                                             <  2:3310902/93‑1 (MQ=255)

            cgGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCaaa                                                                             <  1:3961599/93‑1 (MQ=255)

             ggAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGCTTAACGAGCAAAt                                                                            >  2:267565/1‑93 (MQ=255)

              gagaAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAAtt                                                                           <  2:2825148/93‑1 (MQ=255)

              gagaAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAAtt                                                                           <  1:3696091/93‑1 (MQ=255)

              gagaAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACCAGCAAAtt                                                                           >  1:1870009/1‑93 (MQ=255)

                gaAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAAtttt                                                                         >  1:3529167/1‑92 (MQ=255)

                gaAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTa                                                                         <  2:2740028/93‑1 (MQ=255)

                gaAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTa                                                                         <  1:1069853/93‑1 (MQ=255)

                 aaaTGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTAt                                                                        >  1:1085898/1‑93 (MQ=255)

                   aTGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATcg                                                                      >  1:605460/1‑93 (MQ=255)

                    tGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATcgc                                                                     >  2:2301694/1‑93 (MQ=255)

                     ggCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATcgcg                                                                    <  2:3501009/93‑1 (MQ=255)

                     ggCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCCTCGTTCGCTATTAACGAGCAAATTTATcgcg                                                                    >  1:1634387/1‑93 (MQ=255)

                      gCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATTGCgg                                                                   >  2:3253172/1‑93 (MQ=255)

                       cAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGc                                                                  <  1:244036/93‑1 (MQ=255)

                         aaaTAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTTGCGCTTAACGAGTAAATTTATTGCGGCAg                                                                >  1:1742794/1‑93 (MQ=255)

                          aataatTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGt                                                               >  2:1681775/1‑93 (MQ=255)

                           ataatTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGtt                                                              <  2:193012/93‑1 (MQ=255)

                             aatTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTg                                                            <  2:4085386/93‑1 (MQ=255)

                             aatGCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTg                                                            <  1:4089182/93‑1 (MQ=255)

                              atTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGt                                                           >  2:2883264/1‑93 (MQ=255)

                              atTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGt                                                           >  2:4628890/1‑93 (MQ=255)

                               ttCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTa                                                          <  1:3104938/93‑1 (MQ=255)

                               ttCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGATCGCGCGTTAAAAGCAAATTTATCGCGGGAGATTGTa                                                          >  1:1332902/1‑93 (MQ=255)

                               ttCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTAGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTa                                                          >  2:219640/1‑93 (MQ=255)

                               ttCGCAGGAACGGGATTTATGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGAGTAAAGAGGAAAATTATTGCGGGAGGTTGTa                                                          >  2:2450600/1‑93 (MQ=255)

                                tCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTAt                                                         <  2:4130350/93‑1 (MQ=255)

                                 cGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATg                                                        <  1:4077363/93‑1 (MQ=255)

                                   cAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGt                                                      <  2:788372/93‑1 (MQ=255)

                                    aGGAGCGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTa                                                     <  2:3969870/93‑1 (MQ=255)

                                    aGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTTTTTGGTa                                                     >  2:3957121/1‑93 (MQ=255)

                                     ggAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAg                                                    >  2:3023315/1‑93 (MQ=255)

                                     ggAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGGTTGTATGGGAg                                                    >  1:3980444/1‑93 (MQ=255)

                                         cGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGa                                                >  1:2722631/1‑93 (MQ=255)

                                          gggATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGGTCGCGATTAACGAGCAAATTTATCGCGGCTGTTTGTATGGTAGCGGAc                                               >  2:3856073/1‑93 (MQ=255)

                                           ggATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTGGTTCGCGATTAACGAGCAAATTTATGGCGGACGTTTGTGTGGTAGCGGACa                                              >  2:3917788/1‑93 (MQ=255)

                                           ggATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACa                                              <  1:1133196/93‑1 (MQ=255)

                                             aTTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGa                                            <  1:1652714/93‑1 (MQ=255)

                                             aTTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGa                                            <  2:3043956/93‑1 (MQ=255)

                                              tttCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGAt                                           >  2:1658467/1‑93 (MQ=255)

                                              tttCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGAt                                           >  1:1670470/1‑93 (MQ=255)

                                              tttCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACCAGCAAATTTATCTCGGCAGGTTGTATGGTAGCGGGCAGAt                                           >  2:3525130/1‑93 (MQ=255)

                                               ttcttcTTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGAtt                                          <  1:2849609/93‑1 (MQ=255)

                                               ttCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGAtt                                          <  2:2696189/93‑1 (MQ=255)

                                                tCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTg                                         >  2:317690/1‑93 (MQ=255)

                                                tCTGCGGGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTTAAGAGCAAATTTATCGCAGCAGCTTGTATGGTAGCGGACAGAATg                                         >  2:2845984/1‑93 (MQ=255)

                                                 cTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTgg                                        >  1:915099/1‑93 (MQ=255)

                                                  tGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGt                                       >  2:3685318/1‑93 (MQ=255)

                                                  tGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGt                                       <  1:4012759/93‑1 (MQ=255)

                                                    cGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTca                                     <  2:1138142/93‑1 (MQ=255)

                                                     gTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGAGTGGTcac                                    >  2:268523/1‑93 (MQ=255)

                                                       gATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCacac                                  <  2:3412104/93‑1 (MQ=255)

                                                       gATCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCacac                                  >  2:209441/1‑93 (MQ=255)

                                                        aTCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACAcc                                 <  1:3728070/93‑1 (MQ=255)

                                                         tCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCa                                <  2:3104360/93‑1 (MQ=255)

                                                         tCAACGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCa                                <  2:1945617/93‑1 (MQ=255)

                                                           aaCGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGGTACACCATc                              >  2:4032490/1‑93 (MQ=255)

                                                            aCGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATTGCGGCAGTTTGTATGGTAGCGGACAGATTGGTTACACCATCg                             >  2:3314192/1‑93 (MQ=255)

                                                            aCGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCg                             >  1:3109180/1‑93 (MQ=255)

                                                            aCGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCg                             >  1:3653648/1‑93 (MQ=255)

                                                             cGTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGt                            >  1:1268566/1‑93 (MQ=255)

                                                              gTTGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGtt                           >  1:1569034/1‑93 (MQ=255)

                                                               ttGATTACGGCATTGGCTCGTCGTTCGCGATTAAAGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTa                          >  1:2938652/1‑93 (MQ=255)

                                                                tGATTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTaa                         <  1:734637/93‑1 (MQ=255)

                                                                  aTTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATc                       <  2:3528648/93‑1 (MQ=255)

                                                                  aTTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATc                       >  2:2287589/1‑93 (MQ=255)

                                                                  aTTACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCCGTAATc                       >  1:3008936/1‑93 (MQ=255)

                                                                  aTTACGGCATTGGCTCGCGGTTCGAGATTATGGCGCGAATTTATCGTGGCAGTTTGTATGGGAGCGGACCGATTGGGCAACCAATCGTTAATc                       >  2:435433/1‑93 (MQ=255)

                                                                    tACGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGGCAGATTGGTCACACCATCGGTAATCCg                     >  1:4491226/1‑93 (MQ=255)

                                                                      cGGCATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGa                   <  2:4105078/93‑1 (MQ=255)

                                                                       ggCATTGGCTCGTCGTTCGCGATTAACCAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGAt                  <  1:1464574/93‑1 (MQ=255)

                                                                       ggCATGGGCTCGTCGTTCGCAATTACCGAGCAAATTTATCGCGGCGGTTTGTATGGTAGCGGACAGATTGGTCACCCCATCGTTAATCCGGAt                  <  2:1637934/93‑1 (MQ=255)

                                                                         cATTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATgg                >  2:1144899/1‑93 (MQ=255)

                                                                          aTTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGc               <  2:583787/93‑1 (MQ=255)

                                                                          aTTGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGGTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGc               >  1:4476812/1‑93 (MQ=255)

                                                                           ttGGCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGcg              >  1:473188/1‑93 (MQ=255)

                                                                              gCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGcgtcg           >  1:3073576/1‑93 (MQ=255)

                                                                              gCTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGcgtcg           <  1:3966852/93‑1 (MQ=255)

                                                                               cTCGTCGTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGcgtcgt          >  2:389353/1‑93 (MQ=255)

                                                                                tcgtcgTTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCgtcgtc         <  2:3256153/93‑1 (MQ=255)

                                                                                 cgtcgtTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCt        >  2:2362079/1‑93 (MQ=255)

                                                                                  gtcgtTCGCGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTg       >  2:2406086/1‑93 (MQ=255)

                                                                                  gtcgtTCGCGATTAACGAGCAAATTTATAGCGGCAGATTGTATGGTAGCGGACAGATTGGGCACACCATCGTTAATCCGGATGGCGTCGTCTg       >  2:2858433/1‑93 (MQ=255)

                                                                                   tcgtgcgcGATGAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGc      <  2:93674/93‑1 (MQ=255)

                                                                                    cgttcgcGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCg     >  1:637354/1‑93 (MQ=255)

                                                                                      ttcgcGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGAc   >  1:2750269/1‑93 (MQ=255)

                                                                                      ttcgcGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGAc   >  1:1895055/1‑93 (MQ=255)

                                                                                      ttcgcGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGAc   <  1:15898/93‑1 (MQ=255)

TGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACT  >  NC_000913/2681457‑2681636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`