BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	288,283	A→G	L35P (CTG→CCG)	yagI ←	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	288,283	0	A	G	100.0%	429.5 / NA	138	L35P (CTG→CCG)	yagI	putative regulator
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (68/70); total (68/70)

Only 100 of 143 total aligned reads displayed.

CCGAGGCGATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGAC  >  NC_000913/288193‑288372

ccGAGGCGATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTATCAGCGAGTGGAGGATACTCTTGCTCGGc                                                                                         >  1:4596627/1‑93 (MQ=255)

  gAGGCGATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGccc                                                                                       >  1:1331543/1‑93 (MQ=255)

   aGGCGATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGcccc                                                                                      >  1:1983896/1‑93 (MQ=255)

    ggCGATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCa                                                                                     >  2:63902/1‑93 (MQ=255)

    ggCGATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCa                                                                                     <  2:586289/93‑1 (MQ=255)

     gCGATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCAt                                                                                    >  1:107560/1‑93 (MQ=255)

      cGATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATc                                                                                   <  2:3842056/93‑1 (MQ=255)

       gATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCa                                                                                  <  1:2273963/93‑1 (MQ=255)

       gATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCa                                                                                  <  1:3181495/93‑1 (MQ=255)

        aTACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAg                                                                                 >  2:1487131/1‑93 (MQ=255)

         tACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGt                                                                                >  2:204303/1‑93 (MQ=255)

          aCTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGtt                                                                               >  1:4078431/1‑93 (MQ=255)

          aCTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGtt                                                                               <  1:2006521/93‑1 (MQ=255)

           cTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGttt                                                                              >  1:1883345/1‑93 (MQ=255)

            ttGCCGTTCTCCGGGTTCTGATCGATATAGACGTGAAGCTGCAGGGGTTTTAGCAGCGAGTGGAGGGGACTCTTGCTCGGCCCCATCAGTTTg                                                                             >  1:903918/1‑93 (MQ=255)

               ccGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATTAGGTTGCtt                                                                          >  2:395395/1‑92 (MQ=255)

                cGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGa                                                                         <  1:161892/93‑1 (MQ=255)

                 gTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGAt                                                                        >  2:1644431/1‑93 (MQ=255)

                 gTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGAt                                                                        >  2:1497922/1‑93 (MQ=255)

                  ttCTCCGGGTTCTGATCGATATAGCGGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGATACTCTTGCTCGGCCCCATCAGTTTGCTGATg                                                                       <  2:2420661/93‑1 (MQ=255)

                  ttCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATg                                                                       >  1:592484/1‑93 (MQ=255)

                   tctcCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGt                                                                      >  1:299165/1‑93 (MQ=255)

                    ctcCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTc                                                                     <  1:3595686/93‑1 (MQ=255)

                     tcCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCg                                                                    <  2:1763957/93‑1 (MQ=255)

                     tcCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCg                                                                    <  2:3810425/93‑1 (MQ=255)

                     tcCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCg                                                                    >  2:1237654/1‑93 (MQ=255)

                      ccGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCgg                                                                   >  1:3892509/1‑93 (MQ=255)

                      ccGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCgg                                                                   <  2:4230075/93‑1 (MQ=255)

                        gggTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTg                                                                 >  1:2584121/1‑93 (MQ=255)

                         ggTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGa                                                                <  1:1358004/93‑1 (MQ=255)

                         ggTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGa                                                                <  2:796661/93‑1 (MQ=255)

                           ttCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATc                                                              >  1:1835526/1‑93 (MQ=255)

                           ttCTGATCGATATAGCCGTGAAGCTGCAGGGCTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATc                                                              >  1:1743757/1‑93 (MQ=255)

                             cTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCtt                                                            <  2:575998/93‑1 (MQ=255)

                             cTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCtt                                                            <  2:4477924/93‑1 (MQ=255)

                              tGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTa                                                           >  2:3749828/1‑93 (MQ=255)

                              tGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTa                                                           >  2:4335716/1‑93 (MQ=255)

                              tGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTa                                                           <  2:3179856/93‑1 (MQ=255)

                              tGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTa                                                           >  2:406632/1‑93 (MQ=255)

                               gATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTaa                                                          >  1:835553/1‑93 (MQ=255)

                               gATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTaa                                                          >  2:1346111/1‑93 (MQ=255)

                               gATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTaa                                                          >  2:2889668/1‑93 (MQ=255)

                               gATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTaa                                                          <  1:3415344/93‑1 (MQ=255)

                                aTCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAg                                                         >  2:3729888/1‑93 (MQ=255)

                                 tCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGc                                                        >  2:3313879/1‑93 (MQ=255)

                                   gATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTc                                                      >  1:57640/1‑93 (MQ=255)

                                   gATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTc                                                      <  2:3378768/93‑1 (MQ=255)

                                   gATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTAGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTc                                                      <  1:2509515/93‑1 (MQ=255)

                                    atatAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCg                                                     >  2:480388/1‑93 (MQ=255)

                                    atatAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCg                                                     >  1:2026792/1‑93 (MQ=255)

                                     tataGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCgg                                                    <  2:2849663/93‑1 (MQ=255)

                                     tataGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCgg                                                    >  1:2246796/1‑93 (MQ=255)

                                     tataGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCgg                                                    <  1:2459953/93‑1 (MQ=255)

                                      ataGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATTAGTTTGCTGATGTCGGTGATCTTAAGCTCGGt                                                   <  2:2533462/93‑1 (MQ=255)

                                      ataGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGt                                                   <  2:4523408/93‑1 (MQ=255)

                                        aGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTgg                                                 <  1:113779/93‑1 (MQ=255)

                                        aGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTgg                                                 >  1:3156337/1‑93 (MQ=255)

                                          ccGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGcc                                               <  1:2884352/93‑1 (MQ=255)

                                          ccGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGcc                                               <  2:646158/93‑1 (MQ=255)

                                          ccGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGGACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGcc                                               >  2:4264066/1‑93 (MQ=255)

                                           cGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCt                                              <  2:1769129/93‑1 (MQ=255)

                                             tGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGc                                            >  1:1643210/1‑93 (MQ=255)

                                             tGAAGCTGCAGGCTTTTTAGCAGCGAGTGGAAGGTACTCTTGCTCGGCCCAATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGc                                            <  2:4594577/93‑1 (MQ=255)

                                               aaGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTc                                          >  1:2939198/1‑93 (MQ=255)

                                               aaGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTc                                          <  2:2557948/93‑1 (MQ=255)

                                                   tccAGGGTTTGTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCGCTGTCAGTTTGCTGATGACGGTGATCTTAAGCGCGGTGTCCTGCTCGTTg                                      <  2:2888169/91‑1 (MQ=255)

                                                    gCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGa                                     >  2:4239972/1‑93 (MQ=255)

                                                      aGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAAc                                   >  2:2395026/1‑93 (MQ=255)

                                                      aGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAAc                                   <  2:4415936/93‑1 (MQ=255)

                                                      aGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAAc                                   >  1:3278103/1‑93 (MQ=255)

                                                      aGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGGCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAAc                                   <  1:361283/93‑1 (MQ=255)

                                                       gggTTTTTAGCAGCGAGTGGAGGGTCCTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACa                                  <  2:1329515/93‑1 (MQ=255)

                                                       gggTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACa                                  <  1:3286086/93‑1 (MQ=255)

                                                        ggTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAg                                 >  1:3474831/1‑93 (MQ=255)

                                                        ggTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAg                                 >  1:2733665/1‑93 (MQ=255)

                                                         gTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAGCAgg                                >  2:3981875/1‑93 (MQ=255)

                                                            tttAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCg                             >  1:4623511/1‑93 (MQ=255)

                                                             ttAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGa                            <  1:4102111/93‑1 (MQ=255)

                                                             ttAGCAGCGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGa                            >  1:3010302/1‑93 (MQ=255)

                                                               agcagcGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAgg                          <  1:3608218/93‑1 (MQ=255)

                                                                 cagcGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGAt                        >  1:2085203/1‑93 (MQ=255)

                                                                 cagcGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGAt                        >  2:478606/1‑93 (MQ=255)

                                                                  agcGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGCGGATc                       >  2:391323/1‑93 (MQ=255)

                                                                   gcGAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCt                      <  1:1244367/93‑1 (MQ=255)

                                                                     gAGTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGCCCTGCTCGTTGAACAGGTCGAGGATCTGc                    <  2:873763/93‑1 (MQ=255)

                                                                       gTGGAGGGTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCaa                  <  1:970491/93‑1 (MQ=255)

                                                                            gggTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCAc             >  1:2042554/1‑93 (MQ=255)

                                                                            gggTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCAc             >  2:2080774/1‑93 (MQ=255)

                                                                            gggTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCAc             >  1:2042553/1‑93 (MQ=255)

                                                                            gggTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCAc             <  1:1813502/93‑1 (MQ=255)

                                                                            gggTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCAc             <  1:1733226/93‑1 (MQ=255)

                                                                              gTACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGt           <  2:1250198/93‑1 (MQ=255)

                                                                               tACTCTTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGtt          >  1:2188156/1‑93 (MQ=255)

                                                                                 ctctTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCa        >  2:2332305/1‑93 (MQ=255)

                                                                                 ctctTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCa        >  1:452774/1‑93 (MQ=255)

                                                                                  tctTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCaa       <  1:2858972/93‑1 (MQ=255)

                                                                                  tctTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCaa       <  2:2195805/93‑1 (MQ=255)

                                                                                  tctTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCaa       >  2:1934518/1‑93 (MQ=255)

                                                                                   ctTGCTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCAAc      >  1:3041513/1‑93 (MQ=255)

                                                                                       cTCGGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGAc  <  1:4433261/93‑1 (MQ=255)

CCGAGGCGATACTTGCCGTTCTCCGGGTTCTGATCGATATAGCCGTGAAGCTGCAGGGTTTTTAGCAGCGAGTGGAGGGTACTCTTGCTCAGCCCCATCAGTTTGCTGATGTCGGTGATCTTAAGCTCGGTGGCCTGCTCGTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGAC  >  NC_000913/288193‑288372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`