Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,794,002 A→G D103G (GAC→GGC)  b2664 → putative transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,794,0020AG97.5% 463.6 / ‑0.6 157D103G (GAC→GGC) b2664putative transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (2/2);  new base G (67/86);  total (69/88)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 166 total aligned reads displayed.

AGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAG  >  NC_000913/2793912‑2794090
                                                                                          |                                                                                        
  ctgctCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGtt                                                                                      <  2:3829365/93‑1 (MQ=255)
   tgctCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTtc                                                                                     >  2:1721728/1‑93 (MQ=255)
   tgctCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTtc                                                                                     >  1:3972601/1‑93 (MQ=255)
   tgctCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTtc                                                                                     <  2:2342234/93‑1 (MQ=255)
   tgctCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTtc                                                                                     <  2:4450557/93‑1 (MQ=255)
     ctCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTtctc                                                                                   <  2:4385437/93‑1 (MQ=255)
     ctCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTtctc                                                                                   <  2:3634548/93‑1 (MQ=255)
      tCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCg                                                                                  <  1:2767974/93‑1 (MQ=255)
      tCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCg                                                                                  >  2:3031842/1‑93 (MQ=255)
      tCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCg                                                                                  >  1:3350943/1‑93 (MQ=255)
      tCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCg                                                                                  >  2:3641715/1‑93 (MQ=255)
      tCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGGGGGAGGCAGGCGTTCTCg                                                                                  >  1:3491236/1‑93 (MQ=255)
       cGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGc                                                                                 >  1:1878017/1‑93 (MQ=255)
        gATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCa                                                                                >  2:106487/1‑93 (MQ=255)
          tatTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCaaa                                                                              >  2:2542768/1‑93 (MQ=255)
          tatTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCaaa                                                                              <  2:2633820/93‑1 (MQ=255)
          tatTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCaaa                                                                              >  1:825071/1‑93 (MQ=255)
           atTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCaaaa                                                                             <  1:855019/93‑1 (MQ=255)
            tttgCGCCGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAg                                                                            <  2:3486915/93‑1 (MQ=255)
             tttCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCACGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAgc                                                                           <  1:1372863/93‑1 (MQ=255)
              ttCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAgcg                                                                          <  1:119158/93‑1 (MQ=255)
               tCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAgcgc                                                                         <  1:3118904/93‑1 (MQ=255)
               tCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAgcgc                                                                         <  2:2087206/93‑1 (MQ=255)
                cGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCa                                                                        <  1:4244446/93‑1 (MQ=255)
                cGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTACTCGCAAAAGCGCa                                                                        <  2:57479/93‑1 (MQ=255)
                  aCGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATc                                                                      <  2:3867128/93‑1 (MQ=255)
                     cccGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATctgc                                                                   <  1:1949032/93‑1 (MQ=255)
                      ccGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATctgct                                                                  <  2:179472/93‑1 (MQ=255)
                        gcgcCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGa                                                                <  2:3216637/93‑1 (MQ=255)
                        gcgcCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGa                                                                <  2:4107758/93‑1 (MQ=255)
                           ccAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTa                                                             >  2:861407/1‑93 (MQ=255)
                           ccAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTa                                                             <  1:1467132/93‑1 (MQ=255)
                           ccAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTa                                                             <  1:4336880/93‑1 (MQ=255)
                             aaTATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAg                                                           >  2:3345877/1‑93 (MQ=255)
                             aaTATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAg                                                           >  1:1591228/1‑93 (MQ=255)
                             aaTATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAg                                                           >  2:2494440/1‑93 (MQ=255)
                              atatGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTACGc                                                          >  2:3499854/1‑93 (MQ=255)
                              atatGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGc                                                          >  1:522107/1‑93 (MQ=255)
                              atatGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGc                                                          <  1:896444/93‑1 (MQ=255)
                               tatGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCt                                                         <  1:3743359/93‑1 (MQ=255)
                                 tGGAGGCGGTGTTAGTGAGTCTGGCGATTGCCCACAGTGGCCATGAATGGGAGGAAGGCGTTCTCGCAAAAAAGCATCTGCTGAGTATGCttt                                                       >  2:716366/1‑92 (MQ=255)
                                 tGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTg                                                       <  2:1577727/93‑1 (MQ=255)
                                 tGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTg                                                       <  1:1222167/93‑1 (MQ=255)
                                      gCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGcc                                                  >  1:979567/1‑93 (MQ=255)
                                      gCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGcc                                                  >  2:1319950/1‑93 (MQ=255)
                                      gCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGcc                                                  <  1:2671318/93‑1 (MQ=255)
                                       cGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCt                                                 <  1:2298762/93‑1 (MQ=255)
                                         aTGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCtgt                                               >  1:1355536/1‑93 (MQ=255)
                                         aTGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCtgt                                               <  1:2573338/93‑1 (MQ=255)
                                          tGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCtgtg                                              >  2:772812/1‑93 (MQ=255)
                                          tGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCtgtg                                              >  1:2572902/1‑93 (MQ=255)
                                          tGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCtgtg                                              >  2:2007538/1‑93 (MQ=255)
                                           gTTAGTGAGTCTGGCGATTGCCTGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGa                                             <  1:1810960/93‑1 (MQ=255)
                                           gTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCtgtgc                                             >  2:1032441/1‑92 (MQ=255)
                                            ttAGTGATGCTGGCGAGTGCCCGCGGTGTCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGAc                                            <  2:2931111/93‑1 (MQ=255)
                                            ttAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGAc                                            <  2:700541/93‑1 (MQ=255)
                                              aGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGc                                          >  2:1922955/1‑93 (MQ=255)
                                                tGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCa                                        >  1:1832509/1‑93 (MQ=255)
                                                 gAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAg                                       <  2:327485/93‑1 (MQ=255)
                                                  aGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGc                                      <  2:2429578/93‑1 (MQ=255)
                                                   gTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCg                                     >  1:1733963/1‑93 (MQ=255)
                                                    tCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCga                                    <  1:4499812/93‑1 (MQ=255)
                                                    tCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCga                                    <  2:67198/93‑1 (MQ=255)
                                                      tGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCgaga                                  <  1:3174421/93‑1 (MQ=255)
                                                      tGGCGATTGCCCGCGGTGGCGATGAGGGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGATGCCTGTGACGCCAGCgaga                                  >  2:1959721/1‑93 (MQ=255)
                                                          gATTGCACGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGTCCTGTGACGCCAGCGAGAAAAt                              <  1:4344406/93‑1 (MQ=255)
                                                           aTTGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGCTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATg                             >  1:2100487/1‑93 (MQ=255)
                                                            ttGCCCGCGGTGGTGATGAGTGGGAGGCAGCCGTTCTCGCAAAAGCGCATCTTCTGAGTAAGCTTGAGTCCTGTGACGCCAGCGAGAAAATGc                            <  2:2098111/93‑1 (MQ=255)
                                                            ttGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGc                            >  2:3783441/1‑93 (MQ=255)
                                                            ttGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGAAGCCAGCGAGAAAATGc                            >  1:2257645/1‑93 (MQ=255)
                                                             tGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCt                           <  2:2916458/93‑1 (MQ=255)
                                                             tGCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCt                           <  2:3556006/93‑1 (MQ=255)
                                                              gCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCtt                          <  2:2579522/93‑1 (MQ=255)
                                                              gCCCGCGGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCtt                          <  1:3920489/93‑1 (MQ=255)
                                                                 cgcgGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTtgat                       <  2:3881244/93‑1 (MQ=255)
                                                                 cgcgGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTtgat                       <  2:4658344/93‑1 (MQ=255)
                                                                  gcgGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTtgatg                      <  2:435963/93‑1 (MQ=255)
                                                                  gcgGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTtgatg                      <  1:3797833/93‑1 (MQ=255)
                                                                   cgGTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTtgatga                     <  1:372812/93‑1 (MQ=255)
                                                                    ggTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAg                    <  1:2923174/93‑1 (MQ=255)
                                                                     gTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGt                   >  1:4528569/1‑93 (MQ=255)
                                                                     gTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGt                   <  1:186964/93‑1 (MQ=255)
                                                                     gTGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTCAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAgg                   >  2:3031470/1‑92 (MQ=255)
                                                                      tGGCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTg                  <  2:4191856/93‑1 (MQ=255)
                                                                        gCGATGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTggg                <  2:197339/93‑1 (MQ=255)
                                                                           aTGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGTTTGAGGCCTGTGACGGAAGCGAGAAAATGCTTGATGAGTGGGATc             <  2:2961302/93‑1 (MQ=255)
                                                                           aTGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATc             <  2:1133342/93‑1 (MQ=255)
                                                                            tGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCt            >  1:2986685/1‑93 (MQ=255)
                                                                            tGAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCt            >  2:1299305/1‑93 (MQ=255)
                                                                             gAGTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTg           <  1:693074/93‑1 (MQ=255)
                                                                               gTGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCg         >  2:3393750/1‑93 (MQ=255)
                                                                                tGGGAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGt        <  2:513085/93‑1 (MQ=255)
                                                                                  ggAGGCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtca      <  2:4666315/93‑1 (MQ=255)
                                                                                    gggCAGGCTTTCTCGCAGAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtcatc    <  2:2860601/92‑1 (MQ=255)
                                                                                    aggcaggcGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtcatc    >  1:2074689/1‑93 (MQ=255)
                                                                                    aggcaggcGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtcatc    >  1:3534697/1‑93 (MQ=255)
                                                                                    aggcaggcGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtcatc    >  1:4042086/1‑93 (MQ=255)
                                                                                    aggcaggcGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtcatc    <  2:1355795/93‑1 (MQ=255)
                                                                                    aggcaggcGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtcatc    <  1:1352504/93‑1 (MQ=255)
                                                                                     ggCAGGCGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGtcatca   <  2:4238347/93‑1 (MQ=255)
                                                                                          |                                                                                        
AGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAG  >  NC_000913/2793912‑2794090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: