BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,796,091	A→G	intergenic (+26/+21)	ygaP → / ← stpA	hypothetical protein/StpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,796,091	0	A	G	100.0%	477.7 / NA	153	intergenic (+26/+21)	ygaP/stpA	hypothetical protein/StpA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (73/80); total (73/80)

Only 100 of 160 total aligned reads displayed.

GAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGC  >  NC_000913/2796001‑2796179

gAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTagcggc                                                                                        <  2:815005/93‑1 (MQ=255)

 aaTCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAgcggcg                                                                                       >  1:969991/1‑93 (MQ=255)

   tCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGaa                                                                                     >  2:1309835/1‑92 (MQ=255)

   tCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGAc                                                                                     <  2:3069709/93‑1 (MQ=255)

    cAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACa                                                                                    >  1:4073352/1‑93 (MQ=255)

    cAGCGGTTGTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTACCGGCGACa                                                                                    <  2:4545352/93‑1 (MQ=255)

     aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACAt                                                                                   >  1:1989156/1‑93 (MQ=255)

     aGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACAt                                                                                   >  1:689348/1‑93 (MQ=255)

      gCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATc                                                                                  >  2:3952943/1‑93 (MQ=255)

       cGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATcc                                                                                 <  1:3733866/93‑1 (MQ=255)

        ggTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACGAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCg                                                                                >  1:3041522/1‑93 (MQ=255)

         gTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCgg                                                                               >  1:3859333/1‑93 (MQ=255)

                tgGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGt                                                                        >  2:4527304/1‑93 (MQ=255)

                   aaTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAAt                                                                     <  2:3182732/93‑1 (MQ=255)

                   aaTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAAt                                                                     <  2:3253531/93‑1 (MQ=255)

                    aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAAtt                                                                    >  1:4654609/1‑93 (MQ=255)

                    aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAAtt                                                                    <  1:2236156/93‑1 (MQ=255)

                    aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAAtt                                                                    <  2:4458360/93‑1 (MQ=255)

                    aTGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAAtt                                                                    >  2:2693622/1‑93 (MQ=255)

                     tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTa                                                                   <  1:1073524/93‑1 (MQ=255)

                     tGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTa                                                                   <  1:2664484/93‑1 (MQ=255)

                      ggCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAg                                                                  <  1:597163/93‑1 (MQ=255)

                       gCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGa                                                                 >  1:3471080/1‑93 (MQ=255)

                        cAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGAt                                                                <  1:164508/93‑1 (MQ=255)

                         aaGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATc                                                               >  1:2881276/1‑93 (MQ=255)

                         aaGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATc                                                               <  2:1828008/93‑1 (MQ=255)

                         aaGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATc                                                               >  2:4570756/1‑93 (MQ=255)

                          aGGTTGTTAGATAAGACGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCa                                                              >  2:24219/1‑93 (MQ=255)

                              tgttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGaa                                                          >  2:701005/1‑93 (MQ=255)

                               gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                         <  2:2006352/93‑1 (MQ=255)

                               gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                         >  1:2044941/1‑93 (MQ=255)

                               gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                         <  1:4610557/93‑1 (MQ=255)

                               gttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGaaa                                                         <  1:1410048/93‑1 (MQ=255)

                                ttAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAt                                                        >  2:2638381/1‑93 (MQ=255)

                                  aGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcg                                                      <  1:4216400/93‑1 (MQ=255)

                                  aGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcg                                                      <  1:784541/93‑1 (MQ=255)

                                  aGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcg                                                      >  1:721023/1‑93 (MQ=255)

                                   gATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgt                                                     <  2:402037/93‑1 (MQ=255)

                                     tAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAAtcgtcg                                                   >  2:565187/1‑93 (MQ=255)

                                      aaGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCga                                                  <  2:20563/93‑1 (MQ=255)

                                      aaGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCga                                                  <  1:2374960/93‑1 (MQ=255)

                                        gATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCgaga                                                <  2:4127120/93‑1 (MQ=255)

                                            ccGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                            <  1:3233299/93‑1 (MQ=255)

                                            ccGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                            <  2:2877566/93‑1 (MQ=255)

                                            ccGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAtt                                            <  2:1479045/93‑1 (MQ=255)

                                             cGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGAttt                                           >  1:3425432/1‑93 (MQ=255)

                                              gTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTa                                          <  1:823194/93‑1 (MQ=255)

                                               tGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCCGTAATTAGATCAGGAAATCGTCGAGAGATTTAc                                         >  2:3598864/1‑93 (MQ=255)

                                               tGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAc                                         >  1:3140623/1‑93 (MQ=255)

                                                ggATCCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCTGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAcc                                        <  2:1181575/93‑1 (MQ=255)

                                                ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAct                                        >  1:2828324/1‑92 (MQ=255)

                                                ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAcc                                        <  1:1928088/93‑1 (MQ=255)

                                                ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAcc                                        >  2:3536707/1‑93 (MQ=255)

                                                ggAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTAcc                                        <  1:3620242/93‑1 (MQ=255)

                                                 gAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCt                                       >  2:1423092/1‑93 (MQ=255)

                                                    ccAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCt                                    <  1:2093675/93‑1 (MQ=255)

                                                    ccAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCt                                    >  2:2041098/1‑93 (MQ=255)

                                                     cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                                   >  1:1525030/1‑93 (MQ=255)

                                                     cAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTg                                   >  2:2480281/1‑93 (MQ=255)

                                                      aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGc                                  >  2:3536738/1‑93 (MQ=255)

                                                      aaCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGc                                  >  2:2261799/1‑93 (MQ=255)

                                                       aCGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGcc                                 <  1:3955193/93‑1 (MQ=255)

                                                         gAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAg                               >  1:2629141/1‑93 (MQ=255)

                                                          aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgc                              <  2:1141894/93‑1 (MQ=255)

                                                          aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgc                              >  1:4435147/1‑93 (MQ=255)

                                                          aGCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgc                              >  2:4292574/1‑93 (MQ=255)

                                                           gCTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcg                             >  1:2948965/1‑93 (MQ=255)

                                                            cTTGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAgcgc                            <  1:159090/93‑1 (MQ=255)

                                                              tGAGAAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCt                          <  2:1391449/93‑1 (MQ=255)

                                                                agaAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGa                        <  2:3227384/93‑1 (MQ=255)

                                                                 gaAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGCTTTACCTTCTGCCAGCGCCTGAg                       >  1:2695145/1‑93 (MQ=255)

                                                                 gaAGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAg                       <  1:2694740/93‑1 (MQ=255)

                                                                  aaGCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGc                      <  2:1110870/93‑1 (MQ=255)

                                                                    gCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCaa                    <  1:3152586/93‑1 (MQ=255)

                                                                    gCGACGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCaa                    <  2:1732431/93‑1 (MQ=255)

                                                                    gCGACGCCGCACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCaa                    <  2:174955/93‑1 (MQ=255)

                                                                     cGACGCCGGACGCGCCCTAGCGGCGACATCCGACCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAAt                   <  1:566461/93‑1 (MQ=255)

                                                                      gACGCCGGACGCGCCCTAGCGGCAACATCCGGCCTCAGTAATTAGATCAGGAAACCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAAtt                  <  2:3639479/93‑1 (MQ=255)

                                                                        cGCCGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTgg                <  1:1480567/93‑1 (MQ=255)

                                                                           cGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCtt             >  1:3743182/1‑93 (MQ=255)

                                                                           cGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCtt             >  2:3510143/1‑93 (MQ=255)

                                                                           cGGACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCtt             <  2:525116/93‑1 (MQ=255)

                                                                            ggACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTc            <  1:1104388/93‑1 (MQ=255)

                                                                            ggACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTc            >  1:3714832/1‑93 (MQ=255)

                                                                             gACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCg           >  2:3130556/1‑93 (MQ=255)

                                                                             gACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCg           >  2:1792222/1‑93 (MQ=255)

                                                                             gACGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCg           <  1:381612/93‑1 (MQ=255)

                                                                              aCGCGCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCgg          <  1:120485/93‑1 (MQ=255)

                                                                               cgcgCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgt         <  2:3721874/93‑1 (MQ=255)

                                                                               cgcgCCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGgt         <  1:850485/93‑1 (MQ=255)

                                                                                  gcCCTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTa      <  2:842554/93‑1 (MQ=255)

                                                                                   cccTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTAc     <  1:713906/93‑1 (MQ=255)

                                                                                   cccTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTAc     <  1:2409244/93‑1 (MQ=255)

                                                                                   cccTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTAc     >  1:1691998/1‑93 (MQ=255)

                                                                                   cccTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTAc     <  1:1231251/93‑1 (MQ=255)

                                                                                    ccTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACg    <  2:1615318/93‑1 (MQ=255)

                                                                                    ccTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACg    >  2:3767776/1‑93 (MQ=255)

                                                                                     cTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACgg   >  2:4031887/1‑93 (MQ=255)

                                                                                     cTAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACgg   >  2:2892550/1‑93 (MQ=255)

                                                                                      tAGCGGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGc  >  2:1550695/1‑93 (MQ=255)

GAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGAGAAGCGACGCCGGACGCGCCCTAGCAGCGACATCCGGCCTCAGTAATTAGATCAGGAAATCGTCGAGAGATTTACCTTCTGCCAGCGCCTGAGCAATTGGCTTCGGTGTACGGC  >  NC_000913/2796001‑2796179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`