Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,798,359 A→G T65A (ACT→GCT)  b2672 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,798,3590AG100.0% 509.5 / NA 165T65A (ACT→GCT) b2672hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (91/74);  total (91/74)

Only 100 of 170 total aligned reads displayed.

GGGGCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTACTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCT  >  NC_000913/2798270‑2798448
                                                                                         |                                                                                         
 gggCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGCGCGAATGCATGGTCGTGCTcgc                                                                                      >  1:3506178/1‑93 (MQ=255)
   gCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTcgcg                                                                                     <  1:2371855/93‑1 (MQ=255)
   gCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTcgcg                                                                                     >  2:308685/1‑93 (MQ=255)
     aGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTc                                                                                   >  1:4458359/1‑93 (MQ=255)
      gCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTcc                                                                                  >  2:500669/1‑93 (MQ=255)
      gCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTcc                                                                                  <  1:1265605/93‑1 (MQ=255)
      gCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTcc                                                                                  >  2:4207200/1‑93 (MQ=255)
      gCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTcc                                                                                  >  1:1470461/1‑93 (MQ=255)
        gACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAg                                                                                <  2:336493/93‑1 (MQ=255)
         aCGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGc                                                                               <  1:648606/93‑1 (MQ=255)
          cGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCa                                                                              <  2:1650965/93‑1 (MQ=255)
          cGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCa                                                                              >  1:872708/1‑93 (MQ=255)
          cGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCa                                                                              <  1:3976173/93‑1 (MQ=255)
           gCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCaa                                                                             <  1:4273857/93‑1 (MQ=255)
           gCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCaa                                                                             >  2:2521965/1‑93 (MQ=255)
           gCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCaa                                                                             <  1:3405961/93‑1 (MQ=255)
           gCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCaa                                                                             >  2:2260402/1‑93 (MQ=255)
            ccAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAg                                                                            >  1:1041505/1‑93 (MQ=255)
             cAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGc                                                                           <  1:4207300/93‑1 (MQ=255)
              aaaGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGcc                                                                          >  1:204431/1‑93 (MQ=255)
              aaaGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGcc                                                                          >  2:4114404/1‑93 (MQ=255)
               aaGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcg                                                                         >  2:1824162/1‑93 (MQ=255)
                aGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcgc                                                                        >  1:3955388/1‑93 (MQ=255)
                 ggggAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcgcg                                                                       <  1:426114/93‑1 (MQ=255)
                  gggAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcgcgc                                                                      >  1:1764331/1‑93 (MQ=255)
                   ggAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcgcgcg                                                                     >  2:4391667/1‑93 (MQ=255)
                     aaGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCcccgcgcg                                                                   >  1:913202/1‑93 (MQ=255)
                      aGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGa                                                                  <  2:537532/93‑1 (MQ=255)
                       gCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGAt                                                                 <  1:1700118/93‑1 (MQ=255)
                         tGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGc                                                               <  2:2754938/93‑1 (MQ=255)
                           aaGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCg                                                             >  2:80208/1‑93 (MQ=255)
                            aGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGt                                                            <  2:1423888/93‑1 (MQ=255)
                            aGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGt                                                            <  2:357192/93‑1 (MQ=255)
                            aGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGt                                                            <  1:275967/93‑1 (MQ=255)
                             gCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGtt                                                           <  2:2088051/93‑1 (MQ=255)
                             gCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGtt                                                           >  2:1624140/1‑93 (MQ=255)
                             gCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGtt                                                           >  1:1179539/1‑93 (MQ=255)
                              ccGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTg                                                          <  1:1981047/93‑1 (MQ=255)
                               cgcacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTgg                                                         <  2:3260522/93‑1 (MQ=255)
                               cgcacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTgg                                                         >  2:3880402/1‑93 (MQ=255)
                                 cacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCt                                                       <  1:1629273/93‑1 (MQ=255)
                                 cacgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCt                                                       <  1:2155281/93‑1 (MQ=255)
                                  acgcaGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTg                                                      >  1:2344274/1‑93 (MQ=255)
                                      aGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGcgcg                                                  >  2:1684374/1‑93 (MQ=255)
                                       gTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCgg                                                 >  1:3375350/1‑93 (MQ=255)
                                        gaaaGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGCCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGa                                                <  1:627868/92‑1 (MQ=255)
                                         aaaGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGAt                                               >  1:634916/1‑93 (MQ=255)
                                            gCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCt                                            >  1:2611079/1‑93 (MQ=255)
                                             cTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCtt                                           <  2:466921/93‑1 (MQ=255)
                                             cTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCtt                                           <  1:1689670/93‑1 (MQ=255)
                                              tCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCttt                                          >  1:31790/1‑93 (MQ=255)
                                              tCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCttt                                          <  2:419575/93‑1 (MQ=255)
                                              tCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCttt                                          >  2:2997375/1‑93 (MQ=255)
                                                aGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTg                                        <  1:3083441/93‑1 (MQ=255)
                                                 ggCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGt                                       >  1:2540450/1‑93 (MQ=255)
                                                 ggCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGt                                       >  1:4110850/1‑93 (MQ=255)
                                                  gCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGtt                                      <  1:3892800/93‑1 (MQ=255)
                                                   cATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTc                                     <  1:3251536/93‑1 (MQ=255)
                                                   cATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTc                                     <  1:3169858/93‑1 (MQ=255)
                                                    aTTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCg                                    >  1:4006528/1‑93 (MQ=255)
                                                     ttGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGt                                   >  1:1990867/1‑93 (MQ=255)
                                                      tGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTg                                  >  1:2480114/1‑93 (MQ=255)
                                                       gCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGa                                 <  2:1272624/93‑1 (MQ=255)
                                                         tGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGaaa                               <  2:3515465/93‑1 (MQ=255)
                                                         tGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGaaa                               <  1:2066227/93‑1 (MQ=255)
                                                         tGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGaaa                               <  2:2241834/93‑1 (MQ=255)
                                                         tGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGaaa                               >  1:1003291/1‑93 (MQ=255)
                                                         tGAAAGAAACCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGaaa                               >  2:1569094/1‑93 (MQ=255)
                                                          gaaagaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAg                              >  2:2910367/1‑93 (MQ=255)
                                                           aaagaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGa                             <  1:1339234/93‑1 (MQ=255)
                                                            aagaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGAc                            >  1:3350333/1‑93 (MQ=255)
                                                             agaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGAcc                           <  2:3353608/93‑1 (MQ=255)
                                                              gaaaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGAccc                          >  1:2317005/1‑93 (MQ=255)
                                                                aaCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTg                        <  2:2425941/93‑1 (MQ=255)
                                                                 aCCAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTgg                       <  1:241115/93‑1 (MQ=255)
                                                                  ccAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGgt                      <  1:3517671/93‑1 (MQ=255)
                                                                   cAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGCTTCCTTTGTTCGTGAAAGACCCTGgtg                     >  1:2438239/1‑93 (MQ=255)
                                                                   cAGGGCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGgtg                     >  2:1481661/1‑93 (MQ=255)
                                                                     gggCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTa                   >  2:1260486/1‑93 (MQ=255)
                                                                     gggCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTa                   >  1:1521430/1‑93 (MQ=255)
                                                                     gggCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTa                   >  2:607575/1‑93 (MQ=255)
                                                                     gggCGCGAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTa                   >  2:3978371/1‑93 (MQ=255)
                                                                         gcgAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGt               >  2:4602069/1‑93 (MQ=255)
                                                                           gAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTgg             >  2:3146109/1‑93 (MQ=255)
                                                                           gAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTgg             >  2:3862515/1‑93 (MQ=255)
                                                                           gAATGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACACTGGTGTAGCGTgg             >  1:3555685/1‑93 (MQ=255)
                                                                           gAATGCATGGGCGTTCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTgg             <  2:196846/93‑1 (MQ=255)
                                                                            aaTGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTggg            <  1:4523783/93‑1 (MQ=255)
                                                                            aaTGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTggg            >  1:2222747/1‑93 (MQ=255)
                                                                            aaTGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTggg            >  2:3194825/1‑93 (MQ=255)
                                                                            aaTGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTggg            >  2:1728826/1‑93 (MQ=255)
                                                                             aTGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGt           >  2:3668696/1‑93 (MQ=255)
                                                                             aTGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGt           <  1:3746466/93‑1 (MQ=255)
                                                                             aTGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGt           >  1:2067983/1‑93 (MQ=255)
                                                                              tGCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTa          <  2:3438131/93‑1 (MQ=255)
                                                                               gCATGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAc         <  2:4640170/93‑1 (MQ=255)
                                                                                 aTGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAcag       >  2:1527029/1‑93 (MQ=255)
                                                                                  tGGTCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTAcagc      >  1:1456405/1‑93 (MQ=255)
                                                                                     tCGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACagcagc   <  2:1126653/93‑1 (MQ=255)
                                                                                      cGTGCTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCt  >  1:114527/1‑93 (MQ=255)
                                                                                         |                                                                                         
GGGGCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTACTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCT  >  NC_000913/2798270‑2798448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: