BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,812,848	T→C	intergenic (‑94/+57)	ygaG ← / ← gshA	hypothetical protein/gamma‑glutamate‑cysteine ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,812,848	0	T	C	100.0%	361.8 / NA	114	intergenic (‑94/+57)	ygaG/gshA	hypothetical protein/gamma‑glutamate‑cysteine ligase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (73/41); total (73/41)

Only 100 of 122 total aligned reads displayed.

CCACCTCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGT  >  NC_000913/2812759‑2812938

ccACCTCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCAcccc                                                                                         >  2:4546293/1‑93 (MQ=255)

ccACCTCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCAcccc                                                                                         <  1:4635976/93‑1 (MQ=255)

ccACCTCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCAcccc                                                                                         <  2:3283897/93‑1 (MQ=255)

 cACCTCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCt                                                                                        >  2:3930584/1‑93 (MQ=255)

  aCCTCCGGT‑ATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGa                                                                                      >  2:1739570/1‑93 (MQ=255)

   cgtCCTGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGa                                                                                      <  1:1997273/91‑1 (MQ=255)

     tCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAAt                                                                                    <  2:1024329/93‑1 (MQ=255)

     tCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAAt                                                                                    >  1:2834213/1‑93 (MQ=255)

     tCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAAt                                                                                    >  2:3138840/1‑93 (MQ=255)

      ccGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCACTGAAtt                                                                                   >  1:1981769/1‑93 (MQ=255)

       cGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTc                                                                                  <  1:422996/93‑1 (MQ=255)

        ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTca                                                                                 <  1:194789/93‑2 (MQ=255)

        ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTca                                                                                 >  1:2363640/1‑92 (MQ=255)

        ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTca                                                                                 <  2:1904107/93‑2 (MQ=255)

        ggTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTca                                                                                 >  1:3193785/1‑92 (MQ=255)

         gTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTcag                                                                                >  2:3019251/1‑91 (MQ=255)

         gTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTcag                                                                                >  1:4591914/1‑91 (MQ=255)

           aaTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTcagag                                                                              <  2:2273054/93‑5 (MQ=255)

           aaTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATTcagag                                                                              <  1:285805/93‑5 (MQ=255)

            aTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAgaga                                                                            >  2:1288271/1‑93 (MQ=255)

            aTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAgaga                                                                            >  2:423503/1‑93 (MQ=255)

             tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGAt                                                                           >  2:1457204/1‑93 (MQ=255)

              ttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATg                                                                          <  2:86857/93‑1 (MQ=255)

              ttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATg                                                                          <  2:3724447/93‑1 (MQ=255)

              ttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATg                                                                          >  1:223039/1‑93 (MQ=255)

              ttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATg                                                                          >  2:819841/1‑93 (MQ=255)

               tttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGa                                                                         >  1:188871/1‑93 (MQ=255)

                 tttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCNTCACCCCTGAATT‑CANAGATGaaa                                                                       >  2:7/1‑93 (MQ=255)

                 tttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGaaa                                                                       >  1:1518560/1‑93 (MQ=255)

                 tttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGaaa                                                                       >  2:435921/1‑93 (MQ=255)

                 tttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGaaa                                                                       <  1:4628372/93‑1 (MQ=255)

                  ttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAAt                                                                      >  1:2732279/1‑93 (MQ=255)

                  ttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAAt                                                                      >  1:3493269/1‑93 (MQ=255)

                      aaaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTg                                                                  >  2:3226616/1‑93 (MQ=255)

                      aaaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTg                                                                  >  2:852833/1‑93 (MQ=255)

                      aaaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTg                                                                  <  2:2813638/93‑1 (MQ=255)

                      aaaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTg                                                                  >  2:3359489/1‑93 (MQ=255)

                      aaaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTg                                                                  <  2:3378107/93‑1 (MQ=255)

                       aaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTgg                                                                 >  2:3834805/1‑93 (MQ=255)

                        aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGc                                                                >  2:491940/1‑93 (MQ=255)

                          tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCa                                                              <  2:631625/93‑1 (MQ=255)

                           ttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCAc                                                             >  1:1671518/1‑93 (MQ=255)

                              tGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCa                                                          >  1:2759780/1‑93 (MQ=255)

                                 aCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGa                                                       >  1:2487133/1‑93 (MQ=255)

                                 aCTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGa                                                       >  1:1561688/1‑93 (MQ=255)

                                  ctctTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAg                                                      <  2:886692/93‑1 (MQ=255)

                                  ctctTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAg                                                      >  1:4445204/1‑93 (MQ=255)

                                   tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAgg                                                     >  2:2648559/1‑92 (MQ=255)

                                   tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt                                                     <  1:3536609/93‑1 (MQ=255)

                                   tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt                                                     <  1:4480753/93‑1 (MQ=255)

                                   tctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGt                                                     >  2:1788544/1‑93 (MQ=255)

                                     tttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTgg                                                   >  2:849772/1‑93 (MQ=255)

                                      ttcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGc                                                  >  1:4427602/1‑93 (MQ=255)

                                        cttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCt                                                <  1:2179202/93‑1 (MQ=255)

                                        cttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCt                                                <  1:3508795/93‑1 (MQ=255)

                                         ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                               >  2:2011778/1‑93 (MQ=255)

                                         ttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtt                                               <  1:3233899/93‑1 (MQ=255)

                                           cccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCtttt                                             >  2:534049/1‑93 (MQ=255)

                                            ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttttt                                            >  2:3467627/1‑93 (MQ=255)

                                            ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCttttt                                            >  2:3161064/1‑93 (MQ=255)

                                              aGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttct                                          >  1:674875/1‑93 (MQ=255)

                                               ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctt                                         >  1:209571/1‑93 (MQ=255)

                                                 cGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctttt                                       <  1:1714027/93‑1 (MQ=255)

                                                  gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttttc                                      <  2:3961338/93‑1 (MQ=255)

                                                       tGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCa                                 <  2:4195000/93‑1 (MQ=255)

                                                       tGAGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCa                                 >  1:2074462/1‑93 (MQ=255)

                                                         aGTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAgg                               >  2:3266536/1‑93 (MQ=255)

                                                          gTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGc                              >  2:4329801/1‑93 (MQ=255)

                                                          gTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGc                              >  2:790659/1‑93 (MQ=255)

                                                          gTATATGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGc                              >  1:1600108/1‑93 (MQ=255)

                                                           tataTGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCg                             <  2:2585479/93‑1 (MQ=255)

                                                           tataTGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCg                             <  2:2365103/93‑1 (MQ=255)

                                                           tataTGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCg                             >  1:698038/1‑93 (MQ=255)

                                                            atatGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgt                            >  1:3073588/1‑93 (MQ=255)

                                                            atatGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTAGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgt                            >  2:1020538/1‑93 (MQ=255)

                                                             tatGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtg                           >  1:2255441/1‑93 (MQ=255)

                                                               tGAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtt                         >  2:1351008/1‑93 (MQ=255)

                                                                gAAAGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttt                        <  2:804695/93‑1 (MQ=255)

                                                                 aaaGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtttt                       <  1:2435053/93‑1 (MQ=255)

                                                                  aaGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt                      >  2:1572438/1‑93 (MQ=255)

                                                                  aaGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt                      <  2:2252061/93‑1 (MQ=255)

                                                                   aGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTc                     >  2:4068148/1‑93 (MQ=255)

                                                                   aGACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTc                     >  1:719904/1‑93 (MQ=255)

                                                                    gACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttttc                    >  2:1730736/1‑91 (MQ=255)

                                                                    gACGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTcc                    <  2:538836/93‑1 (MQ=255)

                                                                     aCGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCa                   <  2:3857999/93‑1 (MQ=255)

                                                                     aCGCGCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCa                   >  1:3222085/1‑93 (MQ=255)

                                                                      cgcgCATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAg                  >  1:2472667/1‑93 (MQ=255)

                                                                       gcgcATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCCGc                 >  2:3223829/1‑93 (MQ=255)

                                                                       gcgcATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGc                 <  2:464154/93‑1 (MQ=255)

                                                                       gcgcATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGc                 <  1:3089408/93‑1 (MQ=255)

                                                                        cgcATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCACGCGTGTTTTTTCAAcc                >  2:4036773/1‑93 (MQ=255)

                                                                          cATTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcac              >  2:212449/1‑93 (MQ=255)

                                                                           aTTTGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcaca             <  1:4053345/93‑1 (MQ=255)

                                                                            tttGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCacac            <  1:4275378/93‑1 (MQ=255)

                                                                             ttGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAcc           >  2:2390067/1‑93 (MQ=255)

                                                                              tGTTATCATCACCCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCg          >  1:4549416/1‑93 (MQ=255)

                                                                                   tcatcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAc     <  1:1846992/93‑1 (MQ=255)

                                                                                    catcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACg    <  2:3777013/93‑1 (MQ=255)

                                                                                      tcaccCCTGAATT‑CAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTATTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGt  >  2:4023689/1‑93 (MQ=255)

CCACCTCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGT  >  NC_000913/2812759‑2812938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`