Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,980,918 2 bp→CG coding (348‑349/1236 nt) aslB → putative arylsulfatase regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,980,9180GC99.6% 791.4 / NA 250W116C (TGG→TGCaslBputative arylsulfatase regulator
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (107/142);  total (108/142)
Fisher's exact test for biased strand distribution p-value = 4.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*NC_0009133,980,9190CG100.0% 798.8 / NA 254P117A (CCG→GCG) aslBputative arylsulfatase regulator
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (108/146);  total (108/146)

Only 100 of 257 total aligned reads displayed.

CGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT  >  NC_000913/3980831‑3981005
                                                                                       ||                                                                                      
 gtAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGttt                                                                                   >  1:2791576/1‑93 (MQ=255)
  tAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtc                                                                                  >  2:2608029/1‑93 (MQ=255)
   aGCGCGACAGGCGAAATATCGTGCTGGCAGGAAGATAAGTAACAGCTTCGAGACTAACGGCGGGCTGCTGGATGACGAATGGTGCGCGTTtct                                                                                 <  2:66731/93‑1 (MQ=255)
    gcgcTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTtctc                                                                                <  1:4932/93‑1 (MQ=255)
      gcTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTcgc                                                                              >  2:2993977/1‑93 (MQ=255)
        tACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCgg                                                                            >  2:2873888/1‑93 (MQ=255)
          cAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAg                                                                          >  1:3716053/1‑93 (MQ=255)
          cAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAg                                                                          >  2:3226855/1‑93 (MQ=255)
            ggCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGca                                                                        >  2:4095698/1‑93 (MQ=255)
            ggCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGca                                                                        <  1:599718/93‑1 (MQ=255)
              cGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGcatc                                                                      <  1:384717/93‑1 (MQ=255)
               gAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGcatca                                                                     <  1:4176522/93‑1 (MQ=255)
                aaaTATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGcatcat                                                                    <  1:422577/93‑1 (MQ=255)
                 aaTATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtt                                                                   <  1:3123556/93‑1 (MQ=255)
                 aaTATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtt                                                                   >  1:3020406/1‑93 (MQ=255)
                 aaTATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtt                                                                   >  1:1982180/1‑93 (MQ=255)
                   tatGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtttt                                                                 >  2:3443625/1‑93 (MQ=255)
                   tatGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAtttt                                                                 >  2:1727111/1‑93 (MQ=255)
                      ggTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCtt                                                              <  1:4006272/93‑1 (MQ=255)
                      ggTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCtt                                                              <  1:2170767/93‑1 (MQ=255)
                      ggTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCtt                                                              >  1:1938160/1‑93 (MQ=255)
                       gTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttg                                                             <  2:1018703/93‑1 (MQ=255)
                        tGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttgt                                                            <  2:1170493/93‑1 (MQ=255)
                          cTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttgttg                                                          <  2:2694888/93‑1 (MQ=255)
                          cTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttgttg                                                          <  1:2632640/93‑1 (MQ=255)
                          cTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCttgttg                                                          >  1:3162161/1‑93 (MQ=255)
                           tGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTgg                                                         <  2:1766334/93‑1 (MQ=255)
                             gCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGtt                                                       <  2:4380147/93‑1 (MQ=255)
                             gCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGtt                                                       <  2:1554091/93‑1 (MQ=255)
                             gCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGtt                                                       <  1:1529528/93‑1 (MQ=255)
                             gCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGtt                                                       >  1:636694/1‑93 (MQ=255)
                              cAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGttt                                                      <  2:2412028/93‑1 (MQ=255)
                              cAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGttt                                                      <  2:391663/93‑1 (MQ=255)
                                ggAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGtttgt                                                    >  2:1779444/1‑91 (MQ=255)
                                 gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTc                                                   <  2:160719/93‑1 (MQ=255)
                                   aGATAAGTAACAGCTTCCAGACTAGCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGc                                                 <  2:3894882/93‑1 (MQ=255)
                                   aGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGc                                                 >  2:2198436/1‑93 (MQ=255)
                                   aGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGc                                                 <  1:3603993/93‑1 (MQ=255)
                                     aTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTg                                               <  1:3276887/93‑1 (MQ=255)
                                     aTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTg                                               <  2:1577786/93‑1 (MQ=255)
                                     aTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTg                                               >  1:2880367/1‑93 (MQ=255)
                                       aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGa                                             <  2:563326/93‑1 (MQ=255)
                                        aGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAt                                            <  2:3784821/93‑1 (MQ=255)
                                         gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATg                                           >  2:145544/1‑93 (MQ=255)
                                         gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATg                                           <  2:3025579/93‑1 (MQ=255)
                                         gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATg                                           <  1:1448393/93‑1 (MQ=255)
                                           aaCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGc                                         <  1:58081/93‑1 (MQ=255)
                                            aCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGcc                                        <  1:1808384/93‑1 (MQ=255)
                                              aGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTTGCTGGATGGcccc                                      >  1:1660622/1‑92 (MQ=255)
                                              aGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCg                                      <  1:1614784/93‑1 (MQ=255)
                                               gCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGc                                     >  1:4494287/1‑93 (MQ=255)
                                               gCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGc                                     <  2:1002945/93‑1 (MQ=255)
                                               gCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGc                                     >  1:1359852/1‑93 (MQ=255)
                                                cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc                                    <  1:4404233/93‑1 (MQ=255)
                                                cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc                                    <  1:1168843/93‑1 (MQ=255)
                                                cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc                                    <  1:3842996/93‑1 (MQ=255)
                                                  tCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTg                                  >  2:75948/1‑93 (MQ=255)
                                                   ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga                                 <  2:1473916/93‑1 (MQ=255)
                                                   ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga                                 <  2:2929705/93‑1 (MQ=255)
                                                   ccAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTga                                 <  2:2069120/93‑1 (MQ=255)
                                                      gACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAt                              >  1:80648/1‑93 (MQ=255)
                                                      gACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAt                              >  2:2365922/1‑93 (MQ=255)
                                                        cTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATcc                            <  1:237443/93‑1 (MQ=255)
                                                          aaCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcac                          >  1:2924988/1‑93 (MQ=255)
                                                           aCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcaca                         >  1:1275379/1‑93 (MQ=255)
                                                             ggCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaat                       <  2:1317077/93‑1 (MQ=255)
                                                              gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGCGATCCAcaatc                      >  1:1721260/1‑93 (MQ=255)
                                                              gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatc                      <  2:2856074/93‑1 (MQ=255)
                                                                gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGGGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaa                    >  1:865886/1‑93 (MQ=255)
                                                                gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaa                    >  1:2076672/1‑93 (MQ=255)
                                                                 tgctgcTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaat                   <  1:2426751/93‑1 (MQ=255)
                                                                  gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAata                  <  2:1933205/93‑1 (MQ=255)
                                                                   ctgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAatat                 >  1:3439912/1‑93 (MQ=255)
                                                                    tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc                <  1:3206699/93‑1 (MQ=255)
                                                                    tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc                >  2:3902515/1‑93 (MQ=255)
                                                                    tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc                <  1:4052224/93‑1 (MQ=255)
                                                                     gctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcg               <  2:4534924/93‑1 (MQ=255)
                                                                       tgGATGACGAATGGTGCGCTTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgcg             <  2:1420764/93‑1 (MQ=255)
                                                                       tgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgcg             >  2:2147581/1‑93 (MQ=255)
                                                                        ggATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGt            >  1:250392/1‑93 (MQ=255)
                                                                        ggATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGt            >  1:3026884/1‑93 (MQ=255)
                                                                         gATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTg           >  1:740633/1‑93 (MQ=255)
                                                                          aTGACGAATGGTGCGCGTTTCTCGCGGGGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGa          >  1:1008353/1‑93 (MQ=255)
                                                                           tGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAc         >  2:2824482/1‑93 (MQ=255)
                                                                           tGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAc         <  2:4198893/93‑1 (MQ=255)
                                                                           tGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAc         >  2:4323158/1‑93 (MQ=255)
                                                                            gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACt        >  2:3497442/1‑93 (MQ=255)
                                                                            gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACt        >  1:676462/1‑93 (MQ=255)
                                                                            gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTCGTCGATGGATGGCTCGCTTGAGATCCACAATCAATATCGCGTGACt        <  2:1668181/93‑1 (MQ=255)
                                                                              cGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaa      >  2:1837180/1‑93 (MQ=255)
                                                                              cGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaa      <  2:482342/93‑1 (MQ=255)
                                                                               gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa     <  2:163693/93‑1 (MQ=255)
                                                                               gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa     <  2:227015/93‑1 (MQ=255)
                                                                               gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa     >  1:1440511/1‑93 (MQ=255)
                                                                               gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa     >  1:11309/1‑93 (MQ=255)
                                                                                aaTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAg    >  1:3971262/1‑93 (MQ=255)
                                                                                 aTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAgg   >  1:1642896/1‑93 (MQ=255)
                                                                                 aTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAgg   <  1:1173222/93‑1 (MQ=255)
                                                                                  tggtgcGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGt  <  2:455812/93‑1 (MQ=255)
                                                                                  tggtgcGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGt  <  2:4635308/93‑1 (MQ=255)
                                                                                       ||                                                                                      
CGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT  >  NC_000913/3980831‑3981005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: