BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,979,546	Δ1 bp	coding (1047/1386 nt)	yifK →	putative amino acid/amine transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,979,545	0	G	.	100.0%	900.9 / NA	196	coding (1046/1386 nt)	yifK	putative amino acid/amine transport protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (119/77); total (119/77)

Only 100 of 210 total aligned reads displayed.

ACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATT‑G‑CTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA  >  NC_000913/3979456‑3979633

aCCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCTgaa                                                                                        <  2:3564910/93‑3 (MQ=255)

 ccGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCTgaac                                                                                       >  2:2515469/1‑90 (MQ=255)

 ccGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCTgaac                                                                                       <  1:4439167/93‑4 (MQ=255)

 ccGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCTgaac                                                                                       >  2:4680446/1‑90 (MQ=255)

  cggcggCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCTgaact                                                                                      >  1:2744257/1‑89 (MQ=255)

      ggcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTAcat                                                                                 >  2:593160/1‑93 (MQ=255)

      ggcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTAcat                                                                                 >  1:1247821/1‑93 (MQ=255)

      ggcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTAcat                                                                                 >  2:2626149/1‑93 (MQ=255)

       gcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTAcatc                                                                                >  2:3060025/1‑93 (MQ=255)

       gcAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTAcatc                                                                                <  1:2274202/93‑1 (MQ=255)

         aaTGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTAcatcat                                                                              >  1:1215948/1‑93 (MQ=255)

         aaTGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTAcatcat                                                                              >  1:1738315/1‑93 (MQ=255)

          aTGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCAtt                                                                             >  2:1045865/1‑93 (MQ=255)

          aTGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCAtt                                                                             >  1:2852818/1‑93 (MQ=255)

          aTGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGCGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATTCCT‑GAACTACATCAtt                                                                             >  2:2020114/1‑93 (MQ=255)

           tGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTc                                                                            >  2:1519736/1‑93 (MQ=255)

           tGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTc                                                                            >  1:3612700/1‑93 (MQ=255)

            ggCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTcc                                                                           <  2:3866568/93‑1 (MQ=255)

               gAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCaa                                                                        >  1:3240994/1‑93 (MQ=255)

               gAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCaa                                                                        >  2:2129924/1‑93 (MQ=255)

               gAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCaa                                                                        >  2:325944/1‑93 (MQ=255)

               gAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGCGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCaa                                                                        >  2:1661137/1‑93 (MQ=255)

                 aaGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATc                                                                      >  1:4348839/1‑93 (MQ=255)

                   gTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCg                                                                    >  2:286431/1‑93 (MQ=255)

                     ttCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCa                                                                  >  1:1659804/1‑93 (MQ=255)

                       cccGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGc                                                                >  2:1755190/1‑93 (MQ=255)

                         cGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCgt                                                              <  1:4393498/93‑1 (MQ=255)

                         cGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCgt                                                              <  2:681580/93‑1 (MQ=255)

                          gTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCgtg                                                             >  2:341614/1‑93 (MQ=255)

                           tCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCgtgt                                                            <  1:42583/93‑1 (MQ=255)

                           tCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCgtgt                                                            >  1:4285491/1‑93 (MQ=255)

                             aCGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCgtgtgt                                                          >  2:4060546/1‑93 (MQ=255)

                             aCGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCgtgtgt                                                          >  2:3684361/1‑93 (MQ=255)

                              cGGCGTTCCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGtt                                                         <  1:391296/93‑1 (MQ=255)

                              cGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGtt                                                         <  1:258708/93‑1 (MQ=255)

                               ggCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGttt                                                        >  2:3219539/1‑93 (MQ=255)

                               ggCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGttt                                                        >  1:1367647/1‑93 (MQ=255)

                                gCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCACTCCGCAGCGTGTGTTTg                                                       >  1:2515150/1‑93 (MQ=255)

                                  gTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtc                                                     <  1:643710/93‑1 (MQ=255)

                                   tACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtct                                                    >  2:1583183/1‑93 (MQ=255)

                                    aCCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtcta                                                   >  2:2571682/1‑93 (MQ=255)

                                     ccGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctac                                                  <  1:2599384/93‑1 (MQ=255)

                                      cGGTTGCGGGGGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacg                                                 >  2:1532163/1‑93 (MQ=255)

                                       ggTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacgt                                                >  1:3056105/1‑93 (MQ=255)

                                       ggTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacgt                                                >  1:1901989/1‑93 (MQ=255)

                                        gTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacgtc                                               <  2:2370637/93‑1 (MQ=255)

                                        gTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacgtc                                               <  2:930968/93‑1 (MQ=255)

                                        gTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTgtctacgtc                                               <  2:775116/93‑1 (MQ=255)

                                            cGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACa                                           >  2:2160496/1‑93 (MQ=255)

                                              ggTGTGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGt                                         <  2:4505469/93‑1 (MQ=255)

                                              ggTGTGGCAGTATCTAGTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAAACCGCAGCGTGTGTTTGTCTACGTCTACAGt                                         <  2:1261828/93‑1 (MQ=255)

                                               gtgtGGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTg                                        >  2:4258318/1‑93 (MQ=255)

                                                tgtgGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGc                                       <  2:4251536/93‑1 (MQ=255)

                                                 gtgtCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCAT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGcc                                      <  2:3288017/93‑1 (MQ=255)

                                                 gtgGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGcc                                      <  2:2953403/93‑1 (MQ=255)

                                                 gtgGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGcc                                      <  1:1221455/93‑1 (MQ=255)

                                                 gtgGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGcc                                      >  1:3455681/1‑93 (MQ=255)

                                                  tgGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCa                                     >  1:2297345/1‑93 (MQ=255)

                                                  tgGCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCa                                     >  1:2940221/1‑93 (MQ=255)

                                                   ggCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAg                                    <  1:4601756/93‑1 (MQ=255)

                                                   ggCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAg                                    >  2:3034809/1‑93 (MQ=255)

                                                    gCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGc                                   >  1:1347302/1‑93 (MQ=255)

                                                    gCAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGc                                   >  2:3742780/1‑93 (MQ=255)

                                                     cAGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCg                                  <  2:4371026/93‑1 (MQ=255)

                                                      aGTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGt                                 >  2:82949/1‑93 (MQ=255)

                                                       gTATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTg                                >  2:2415741/1‑93 (MQ=255)

                                                        tATCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGc                               >  1:3116455/1‑93 (MQ=255)

                                                         aTCTATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCt                              <  2:1895132/93‑1 (MQ=255)

                                                            tATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           <  1:1049294/93‑1 (MQ=255)

                                                            tATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           >  2:3355115/1‑93 (MQ=255)

                                                            tATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           >  1:3313713/1‑93 (MQ=255)

                                                            tATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           >  1:4007576/1‑93 (MQ=255)

                                                            tATTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTcc                           <  1:4040289/93‑1 (MQ=255)

                                                             aTTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCg                          >  1:4741771/1‑93 (MQ=255)

                                                             aTTGCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCg                          >  1:2260143/1‑93 (MQ=255)

                                                                gCTATTCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCgggg                       >  1:2900151/1‑93 (MQ=255)

                                                                  tATTCTGCTAATTGG‑CTCATGCCT‑GAACTTCATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGAt                     <  2:3766355/93‑1 (MQ=255)

                                                                   aTTCTGCTAATT‑GTCTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGCCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATg                    <  1:2045291/93‑1 (MQ=255)

                                                                    ttCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATgg                   >  2:53284/1‑93 (MQ=255)

                                                                     tCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGt                  >  1:2403600/1‑93 (MQ=255)

                                                                     tCTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGt                  <  2:2670149/93‑1 (MQ=255)

                                                                      cTGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTg                 >  1:1571368/1‑93 (MQ=255)

                                                                       tGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTgg                >  1:4066480/1‑92 (MQ=255)

                                                                       tGCTAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGc                >  1:3283830/1‑93 (MQ=255)

                                                                          tAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGTTGGTGCCAt             >  1:534966/1‑93 (MQ=255)

                                                                          tAATTGG‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGAGATGGTGCCAt             <  1:2709739/93‑1 (MQ=255)

                                                                            attgg‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATgg           >  1:2116750/5‑93 (MQ=255)

                                                                             ttgg‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGt          <  1:3099856/90‑1 (MQ=255)

                                                                             ttgg‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGt          >  2:2454009/4‑93 (MQ=255)

                                                                              tgg‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGtt         >  1:117215/3‑93 (MQ=255)

                                                                              tgg‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGtt         <  1:1330926/91‑1 (MQ=255)

                                                                              tgg‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGGTTGTCTACGTCTTCAGTGCCAGCGTGCTTTCGGGGATGGTGCCATggat         >  2:4438514/3‑91 (MQ=255)

                                                                               gg‑CTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGttt        <  2:3920556/92‑1 (MQ=255)

                                                                                  cTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTtgt      <  2:2887172/93‑1 (MQ=255)

                                                                                  cTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTtgt      >  1:718581/1‑93 (MQ=255)

                                                                                  cTCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTtgt      <  1:297582/93‑1 (MQ=255)

                                                                                   tCATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTtgtg     >  2:3981647/1‑93 (MQ=255)

                                                                                    cATGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGa    <  2:1146377/93‑1 (MQ=255)

                                                                                      tGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGata  <  1:3582509/93‑1 (MQ=255)

                                                                                      tGCCT‑GAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGata  >  1:1884828/1‑93 (MQ=255)

ACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATT‑G‑CTCATGCCTGGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATA  >  NC_000913/3979456‑3979633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`