Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 722,751 (T)8→7 coding (887/2685 nt) kdpD ← KdpD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913722,7440T.99.2% 555.8 / ‑2.8 124coding (894/2685 nt)kdpDKdpD
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base . (66/57);  total (66/58)
Fisher's exact test for biased strand distribution p-value = 4.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 147 total aligned reads displayed.

ACTACCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGTTTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAGCCGCGCCGCTGCGCG  >  NC_000913/722652‑722836
                                                                                            |                                                                                            
aCTACCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGt                                                                                              >  2:997722/1‑93 (MQ=255)
aCTACCGCGTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGt                                                                                              >  2:1599578/1‑93 (MQ=255)
   tccGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttt                                                                                           <  1:399829/92‑1 (MQ=255)
    ccGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGttttt                                                                                          >  1:757347/1‑93 (MQ=255)
    ccGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGttttt                                                                                          <  2:2245670/93‑1 (MQ=255)
      gCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGttttttt                                                                                        >  1:4011715/1‑93 (MQ=255)
      gCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGttttttt                                                                                        >  1:514016/1‑93 (MQ=255)
      gCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGttttttt                                                                                        >  2:1368703/1‑93 (MQ=255)
         ttCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttttccg                                                                                     >  1:1183365/1‑90 (MQ=255)
         ttCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGtttttttccg                                                                                     >  1:1631714/1‑90 (MQ=255)
           ctctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGt                                                                                  <  1:2292399/93‑1 (MQ=255)
            tctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTa                                                                                 >  2:1984609/1‑93 (MQ=255)
            tctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTa                                                                                 <  1:66819/93‑1 (MQ=255)
            tctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTa                                                                                 <  2:2565294/93‑1 (MQ=255)
            tctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTa                                                                                 >  2:2739865/1‑93 (MQ=255)
            tctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTa                                                                                 <  1:1350073/93‑1 (MQ=255)
            tctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTa                                                                                 >  2:4608872/1‑93 (MQ=255)
             ctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTaa                                                                                >  2:830284/1‑93 (MQ=255)
             ctTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTaa                                                                                >  1:360686/1‑93 (MQ=255)
              ttCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTaac                                                                               >  2:3920476/1‑92 (MQ=255)
              ttCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAg                                                                               >  1:3905932/1‑93 (MQ=255)
               tCCGCTGGGCCAAAAATTGTTGCCCGCTCCGCGCCCATTCCCTGCGCCAGCCGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGc                                                                              <  2:1150567/93‑1 (MQ=255)
               tCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGc                                                                              <  1:2280407/93‑1 (MQ=255)
               tCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGc                                                                              <  1:24189/93‑1 (MQ=255)
                ccGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCg                                                                             <  1:435219/93‑1 (MQ=255)
                 cGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCgg                                                                            <  1:1085080/93‑1 (MQ=255)
                  gCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGt                                                                           <  1:2999219/93‑1 (MQ=255)
                  gCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGt                                                                           <  1:708802/93‑1 (MQ=255)
                  gCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑‑TTTTTTCCGGTAAGCGGTg                                                                          >  2:2514963/1‑93 (MQ=255)
                    tGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgc                                                                         <  2:2410858/93‑1 (MQ=255)
                     ggATTAGAAAGTGTTGCCGCCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgca                                                                        <  1:426526/93‑1 (MQ=255)
                     ggATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgca                                                                        <  2:3489007/93‑1 (MQ=255)
                      gATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcag                                                                       >  2:1836618/1‑93 (MQ=255)
                      gATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcag                                                                       <  1:322952/93‑1 (MQ=255)
                       atgaGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagg                                                                      <  1:1083912/90‑1 (MQ=255)
                       aTCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagg                                                                      >  2:2169169/1‑93 (MQ=255)
                        tCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcaggg                                                                     <  2:3564142/93‑1 (MQ=255)
                        tCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcaggg                                                                     >  1:3113247/1‑93 (MQ=255)
                          aGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggca                                                                   <  2:994291/93‑1 (MQ=255)
                          aGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggca                                                                   >  1:189852/1‑93 (MQ=255)
                          aGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggca                                                                   <  1:2825124/93‑1 (MQ=255)
                           gAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggcag                                                                  >  2:1749987/1‑93 (MQ=255)
                           gAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggcag                                                                  >  2:3166779/1‑93 (MQ=255)
                           gAAAGTGTTGCCGTCTCCGCGCCCAGTACCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGGCG‑TTTTTTTCCGGTAAGCGGTgcagggcag                                                                  <  2:2872808/93‑1 (MQ=255)
                            aaaGTGTGGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTgcagggcagg                                                                 <  2:924308/93‑1 (MQ=255)
                              aGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTACGCGGTGCAGGGCAgggg                                                               >  1:3710747/1‑93 (MQ=255)
                               gtgtTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGt                                                              <  2:1408902/93‑1 (MQ=255)
                                 gtTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGttt                                                            >  2:2883513/1‑93 (MQ=255)
                                  ttGCCGTCTCCGCGCCCAGTTGCTGCGCCAGACGTAAGGCGCTGCGCATTGCCCGACGTTTTCTTTCCGGTAAGCGGTGCAGGGCAGGGGttt                                                            >  1:2586602/1‑93 (MQ=255)
                                  ttGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑‑TTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCa                                                          <  2:1122744/93‑1 (MQ=255)
                                    tccGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCaa                                                         <  1:2481955/92‑1 (MQ=255)
                                      cGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACa                                                       >  1:3989309/1‑93 (MQ=255)
                                       gTCTCCGCGCCCAGGTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACAt                                                      >  2:4312635/1‑93 (MQ=255)
                                        tctcCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATa                                                     >  1:2756154/1‑93 (MQ=255)
                                         ctcCGGCCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑GGTTTTTCCGGTACGCGGCGAGGGGCAGGGGTTGCAACAAac                                                    >  1:4232464/1‑93 (MQ=255)
                                         ctcCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATac                                                    >  2:115382/1‑93 (MQ=255)
                                         ctcCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATac                                                    >  2:103569/1‑93 (MQ=255)
                                         ctcCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATac                                                    >  1:4687267/1‑93 (MQ=255)
                                          tcCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATaca                                                   >  2:3335815/1‑93 (MQ=255)
                                           ccGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATacac                                                  >  2:3783895/1‑93 (MQ=255)
                                            cgcgCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACAcc                                                 >  2:367475/1‑93 (MQ=255)
                                            cgcgCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACAcc                                                 <  1:470894/93‑1 (MQ=255)
                                             gcgcCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACcg                                                <  1:2014078/93‑1 (MQ=255)
                                               gcCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACcgcg                                              <  2:698560/93‑1 (MQ=255)
                                                cccAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACAACGCGt                                             >  2:2791543/1‑93 (MQ=255)
                                                 ccAGTTCCTGCGCCAGACGTAATGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGGTTCAACATACACCGCGTg                                            >  1:2977734/1‑93 (MQ=255)
                                                 ccAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCTGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTg                                            >  2:131227/1‑93 (MQ=255)
                                                    gTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCa                                         >  1:91976/1‑93 (MQ=255)
                                                       ccTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGAc                                      <  1:2174977/93‑1 (MQ=255)
                                                         tGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGc                                    >  1:1824171/1‑93 (MQ=255)
                                                          gcgcCAGACGTAAGGTGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCt                                   >  2:4691287/1‑93 (MQ=255)
                                                            gcCAGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTAc                                 >  1:1871263/1‑93 (MQ=255)
                                                               aGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCa                              >  1:4231878/1‑93 (MQ=255)
                                                               aGACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCa                              >  2:1264266/1‑93 (MQ=255)
                                                                gACGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAg                             >  1:1640174/1‑93 (MQ=255)
                                                                  cGTAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGcc                           >  1:1290894/1‑93 (MQ=255)
                                                                    tAAGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGt                         >  2:1459138/1‑93 (MQ=255)
                                                                     aaGGCGCTGAGAATTGCCCGACGTTTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGt                         <  1:3182008/93‑1 (MQ=255)
                                                                     aaGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTg                        <  1:867675/93‑1 (MQ=255)
                                                                      aGGCGCTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGa                       >  1:3543648/1‑93 (MQ=255)
                                                                        gcgcTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACg                     >  2:2191795/1‑93 (MQ=255)
                                                                          gcTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGcc                   <  2:3466047/93‑1 (MQ=255)
                                                                          gcTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGcc                   <  2:3799188/93‑1 (MQ=255)
                                                                          gcTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGcc                   <  1:1665274/93‑1 (MQ=255)
                                                                           cTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCa                  >  2:3745425/1‑93 (MQ=255)
                                                                           cTGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCa                  <  2:2168211/93‑1 (MQ=255)
                                                                            tGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAg                 >  1:1190342/1‑93 (MQ=255)
                                                                            tGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAg                 >  2:1987022/1‑93 (MQ=255)
                                                                            tGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAg                 >  1:417630/1‑93 (MQ=255)
                                                                            tGAGAATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGCTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAg                 >  2:3197089/1‑93 (MQ=255)
                                                                             gagaATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgc                <  2:4611069/93‑1 (MQ=255)
                                                                             gagaATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgc                >  2:293497/1‑93 (MQ=255)
                                                                             gagaATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgc                >  1:1134029/1‑93 (MQ=255)
                                                                              agaATTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgcc               >  2:518224/1‑93 (MQ=255)
                                                                                aaTTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgc             <  2:1018462/93‑1 (MQ=255)
                                                                                aaTTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgc             <  2:3330680/93‑1 (MQ=255)
                                                                                 aTTGCCCGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgcg            <  2:3953100/93‑1 (MQ=255)
                                                                                     cccGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAgccgcgccgc        <  2:4005239/93‑1 (MQ=255)
                                                                                      ccGACG‑TTTTTTTCCGGTAAGCGGGGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAGCCGCGCCGCt       >  2:700198/1‑93 (MQ=255)
                                                                                       cGACG‑TTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAGCCGCGCCGCTg      >  2:2985293/1‑93 (MQ=255)
                                                                                            |                                                                                            
ACTACCGCTTTCTCTTCCGCTGGATCAGAAAGTGTTGCCGTCTCCGCGCCCAGTTCCTGCGCCAGACGTAAGGCGCTGAGAATTGCCCGACGTTTTTTTTCCGGTAAGCGGTGCAGGGCAGGGGTTTCAACATACACCGCGTGCCAGACGCTACCCAGCCGTGACGCCAGCCGCGCCGCTGCGCG  >  NC_000913/722652‑722836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑